FFCP PHASE1:Hg19::chr4:134076121..134076131,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002150!7.62e-14!3;CL:0000861!7.62e-14!3 | |ontology_enrichment_celltype=CL:0002150!7.62e-14!3;CL:0000861!7.62e-14!3 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.66e-18;1!CL:0000911;2.66e-18;1!CL:0000814;2.66e-18;1 | |ontology_enrichment_celltype_v019=CL:0002127;2.66e-18;1!CL:0000911;2.66e-18;1!CL:0000814;2.66e-18;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.66e-18,1;CL:0000914,2.66e-18,1;CL:0000911,2.66e-18,1;CL:0000814,2.66e-18,1;CL:0002042,2.66e-18,1;CL:0002039,2.66e-18,1;CL:0002040,2.66e-18,1;CL:0002041,2.66e-18,1;CL:0000893,7.98e-10,2;CL:0002489,7.98e-10,2;CL:0000809,7.98e-10,2;CL:0000808,7.98e-10,2;CL:0000894,7.98e-10,2;CL:0000806,7.98e-10,2;CL:0000807,7.98e-10,2;CL:0000805,7.98e-10,2;CL:0002425,7.98e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.35e-36;29!CL:0002425;7.98e-10;2 | |ontology_enrichment_development_v019=UBERON:0008947;6.35e-36;29!CL:0002425;7.98e-10;2 | ||
|ontology_enrichment_disease=DOID:0050687!7.44e-07!143 | |ontology_enrichment_disease=DOID:0050687!7.44e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:6193;1.22e-17;1!DOID:3350;1.71e-09;2 | |ontology_enrichment_disease_v019=DOID:6193;1.22e-17;1!DOID:3350;1.71e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,1.70e-17,1;DOID:0050687,9.11e-11,143;DOID:305,1.78e-09,106;DOID:3350,2.02e-09,2;DOID:162,1.34e-07,235;DOID:14566,2.03e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.10e-40!9;UBERON:0001869!4.45e-25!32;UBERON:0002020!1.53e-23!34;UBERON:0003528!1.53e-23!34;UBERON:0001893!1.89e-23!34;UBERON:0001557!1.28e-22!19;UBERON:0001950!3.28e-22!20;UBERON:0002791!5.11e-21!33;UBERON:0000956!6.85e-21!25;UBERON:0000203!6.85e-21!25;UBERON:0002619!4.38e-20!22;UBERON:0001049!5.00e-19!57;UBERON:0005068!5.00e-19!57;UBERON:0006241!5.00e-19!57;UBERON:0007135!5.00e-19!57;UBERON:0002780!5.60e-19!41;UBERON:0001890!5.60e-19!41;UBERON:0006240!5.60e-19!41;UBERON:0000955!1.08e-18!69;UBERON:0006238!1.08e-18!69;UBERON:0003080!1.85e-18!42;UBERON:0002616!2.96e-18!59;UBERON:0000200!1.02e-17!6;UBERON:0001017!4.37e-15!82;UBERON:0005743!3.42e-14!86;UBERON:0000073!5.00e-14!94;UBERON:0001016!5.00e-14!94;UBERON:0003056!1.26e-13!61;UBERON:0002346!1.36e-13!90;UBERON:0003075!7.38e-13!86;UBERON:0007284!7.38e-13!86;UBERON:0000153!1.54e-11!129;UBERON:0007811!1.54e-11!129;UBERON:0000033!5.33e-11!123;UBERON:0000064!8.92e-11!219;UBERON:0001870!7.73e-10!2;UBERON:0007023!1.07e-08!115;UBERON:0001871!1.15e-08!7;UBERON:0008947!2.90e-08!38;UBERON:0003258!2.90e-08!38;UBERON:0000072!3.74e-08!46;UBERON:0002021!4.01e-08!5;UBERON:0000924!2.99e-07!173;UBERON:0006601!2.99e-07!173;UBERON:0000065!8.00e-07!53;UBERON:0000477!9.45e-07!286 | |ontology_enrichment_uberon=UBERON:0001737!2.10e-40!9;UBERON:0001869!4.45e-25!32;UBERON:0002020!1.53e-23!34;UBERON:0003528!1.53e-23!34;UBERON:0001893!1.89e-23!34;UBERON:0001557!1.28e-22!19;UBERON:0001950!3.28e-22!20;UBERON:0002791!5.11e-21!33;UBERON:0000956!6.85e-21!25;UBERON:0000203!6.85e-21!25;UBERON:0002619!4.38e-20!22;UBERON:0001049!5.00e-19!57;UBERON:0005068!5.00e-19!57;UBERON:0006241!5.00e-19!57;UBERON:0007135!5.00e-19!57;UBERON:0002780!5.60e-19!41;UBERON:0001890!5.60e-19!41;UBERON:0006240!5.60e-19!41;UBERON:0000955!1.08e-18!69;UBERON:0006238!1.08e-18!69;UBERON:0003080!1.85e-18!42;UBERON:0002616!2.96e-18!59;UBERON:0000200!1.02e-17!6;UBERON:0001017!4.37e-15!82;UBERON:0005743!3.42e-14!86;UBERON:0000073!5.00e-14!94;UBERON:0001016!5.00e-14!94;UBERON:0003056!1.26e-13!61;UBERON:0002346!1.36e-13!90;UBERON:0003075!7.38e-13!86;UBERON:0007284!7.38e-13!86;UBERON:0000153!1.54e-11!129;UBERON:0007811!1.54e-11!129;UBERON:0000033!5.33e-11!123;UBERON:0000064!8.92e-11!219;UBERON:0001870!7.73e-10!2;UBERON:0007023!1.07e-08!115;UBERON:0001871!1.15e-08!7;UBERON:0008947!2.90e-08!38;UBERON:0003258!2.90e-08!38;UBERON:0000072!3.74e-08!46;UBERON:0002021!4.01e-08!5;UBERON:0000924!2.99e-07!173;UBERON:0006601!2.99e-07!173;UBERON:0000065!8.00e-07!53;UBERON:0000477!9.45e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.92e-116;9!UBERON:0001557;2.92e-116;9!UBERON:0000072;7.72e-26;37!UBERON:0000065;2.06e-23;44!UBERON:0001004;8.49e-13;65!UBERON:0002702;1.71e-09;2!UBERON:0001870;9.64e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.92e-116;9!UBERON:0001557;2.92e-116;9!UBERON:0000072;7.72e-26;37!UBERON:0000065;2.06e-23;44!UBERON:0001004;8.49e-13;65!UBERON:0002702;1.71e-09;2!UBERON:0001870;9.64e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.87e-116,9;UBERON:0001557,8.65e-70,19;UBERON:0000072,5.95e-28,47;UBERON:0008947,2.25e-27,38;UBERON:0003258,2.25e-27,38;UBERON:0000065,2.94e-24,54;UBERON:0001004,1.53e-17,74;UBERON:0001041,8.02e-15,87;UBERON:0004921,1.21e-10,118;UBERON:0002702,1.71e-09,2;UBERON:0001007,1.56e-08,145;UBERON:0001555,1.56e-08,145;UBERON:0007026,1.56e-08,145;UBERON:0011216,5.99e-08,223;UBERON:0001048,1.03e-07,160;UBERON:0004119,1.16e-07,160;UBERON:0000925,1.16e-07,160;UBERON:0006595,1.16e-07,160;UBERON:0001870,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,2.12952240071719,2.86593973132773,2.16909926895134,2.20587945464788,1.96091499683166,1.89816495288877,2.29213223872279,3.13954344200554,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.17344921558575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,1.0319161948297,0.387025325156341,0.292357268344742,0.410577285266046,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.488105059607853,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,1.41539347670307,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.691403925334676,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,2.12952240071719,2.86593973132773,2.16909926895134,2.20587945464788,1.96091499683166,1.89816495288877,2.29213223872279,3.13954344200554,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.17344921558575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,1.0319161948297,0.387025325156341,0.292357268344742,0.410577285266046,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.488105059607853,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,1.41539347670307,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.691403925334676,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p15@PCDH10 | |short_description=p15@PCDH10 | ||
}} | }} |
Revision as of 03:19, 16 November 2012
Short description: | p15@PCDH10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_PCDH10_5end |
Coexpression cluster: | C2776_NK_Hep2_plasma_medial_neuroblastoma_caudate_frontal |
Association with transcript: | 73bp_to_ENST00000511112_5end |
EntrezGene: | PCDH10 |
HGNC: | 13404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.66e-18 | 1 |
immature NK T cell | 2.66e-18 | 1 |
effector T cell | 2.66e-18 | 1 |
mature NK T cell | 2.66e-18 | 1 |
immature NK T cell stage IV | 2.66e-18 | 1 |
immature NK T cell stage I | 2.66e-18 | 1 |
immature NK T cell stage II | 2.66e-18 | 1 |
immature NK T cell stage III | 2.66e-18 | 1 |
thymocyte | 7.98e-10 | 2 |
double negative thymocyte | 7.98e-10 | 2 |
double-positive, alpha-beta thymocyte | 7.98e-10 | 2 |
DN4 thymocyte | 7.98e-10 | 2 |
DN1 thymic pro-T cell | 7.98e-10 | 2 |
DN2 thymocyte | 7.98e-10 | 2 |
DN3 thymocyte | 7.98e-10 | 2 |
immature single positive thymocyte | 7.98e-10 | 2 |
early T lineage precursor | 7.98e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.87e-116 | 9 |
upper respiratory tract | 8.65e-70 | 19 |
segment of respiratory tract | 5.95e-28 | 47 |
respiratory primordium | 2.25e-27 | 38 |
endoderm of foregut | 2.25e-27 | 38 |
respiratory tract | 2.94e-24 | 54 |
respiratory system | 1.53e-17 | 74 |
foregut | 8.02e-15 | 87 |
subdivision of digestive tract | 1.21e-10 | 118 |
middle frontal gyrus | 1.71e-09 | 2 |
digestive system | 1.56e-08 | 145 |
digestive tract | 1.56e-08 | 145 |
primitive gut | 1.56e-08 | 145 |
organ system subdivision | 5.99e-08 | 223 |
primordium | 1.03e-07 | 160 |
endoderm-derived structure | 1.16e-07 | 160 |
endoderm | 1.16e-07 | 160 |
presumptive endoderm | 1.16e-07 | 160 |
frontal cortex | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.70e-17 | 1 |
cell type cancer | 9.11e-11 | 143 |
carcinoma | 1.78e-09 | 106 |
mesenchymal cell neoplasm | 2.02e-09 | 2 |
cancer | 1.34e-07 | 235 |
disease of cellular proliferation | 2.03e-07 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.