FFCP PHASE1:Hg19::chr2:46524878..46524891,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.36e-34!254;CL:0000223!8.37e-14!59;CL:0002076!7.74e-11!43;CL:0000076!9.93e-11!62;CL:0000213!4.45e-08!57;CL:0000215!4.45e-08!57;CL:0002368!1.25e-07!13;CL:0000220!3.71e-07!246 | |ontology_enrichment_celltype=CL:0000066!1.36e-34!254;CL:0000223!8.37e-14!59;CL:0002076!7.74e-11!43;CL:0000076!9.93e-11!62;CL:0000213!4.45e-08!57;CL:0000215!4.45e-08!57;CL:0002368!1.25e-07!13;CL:0000220!3.71e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.88e-09;42!CL:0002368;7.77e-09;13 | |ontology_enrichment_celltype_v019=CL:0002076;3.88e-09;42!CL:0002368;7.77e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.49e-36,253;CL:0000223,2.59e-14,58;CL:0002076,1.85e-11,42;CL:0000076,1.02e-10,63;CL:0002368,6.72e-09,13;CL:0000213,5.95e-08,58;CL:0000215,5.95e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000223;1.28e-08;58!UBERON:0008947;5.42e-07;29 | |ontology_enrichment_development_v019=CL:0000223;1.28e-08;58!UBERON:0008947;5.42e-07;29 | ||
|ontology_enrichment_disease=DOID:305!6.63e-08!106 | |ontology_enrichment_disease=DOID:305!6.63e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.58e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.27e-20!169;UBERON:0000925!2.27e-20!169;UBERON:0006595!2.27e-20!169;UBERON:0001007!6.90e-15!155;UBERON:0001555!6.90e-15!155;UBERON:0007026!6.90e-15!155;UBERON:0004921!2.17e-14!129;UBERON:0004185!2.17e-14!129;UBERON:0000077!1.97e-13!130;UBERON:0000062!4.48e-12!511;UBERON:0001048!6.95e-12!168;UBERON:0001041!1.48e-11!98;UBERON:0000467!1.71e-11!625;UBERON:0001004!1.79e-11!72;UBERON:0000064!1.86e-11!219;UBERON:0000480!1.92e-11!626;UBERON:0000466!2.15e-11!126;UBERON:0004111!2.15e-11!241;UBERON:0000481!9.91e-11!347;UBERON:0005177!1.27e-10!107;UBERON:0000477!1.47e-10!286;UBERON:0005911!1.96e-10!82;UBERON:0000468!3.57e-10!659;UBERON:0000483!4.96e-10!309;UBERON:0000119!6.90e-10!312;UBERON:0008947!2.41e-09!38;UBERON:0003258!2.41e-09!38;UBERON:0000065!3.11e-09!53;UBERON:0009569!3.88e-09!113;UBERON:0007023!5.44e-09!115;UBERON:0000464!1.74e-08!104;UBERON:0005157!1.82e-08!51;UBERON:0005181!2.87e-08!35;UBERON:0003104!4.71e-08!238;UBERON:0009142!4.71e-08!238;UBERON:0002530!5.41e-08!59;UBERON:0002365!6.24e-08!31;UBERON:0002330!6.24e-08!31;UBERON:0005178!7.08e-08!34;UBERON:0002224!7.08e-08!34;UBERON:0005153!1.48e-07!37;UBERON:0000923!4.26e-07!604;UBERON:0005291!4.26e-07!604;UBERON:0006598!4.26e-07!604;UBERON:0002532!4.26e-07!604;UBERON:0002050!6.58e-07!605;UBERON:0005423!6.58e-07!605;UBERON:0005631!7.96e-07!14;UBERON:0000158!7.96e-07!14 | |ontology_enrichment_uberon=UBERON:0004119!2.27e-20!169;UBERON:0000925!2.27e-20!169;UBERON:0006595!2.27e-20!169;UBERON:0001007!6.90e-15!155;UBERON:0001555!6.90e-15!155;UBERON:0007026!6.90e-15!155;UBERON:0004921!2.17e-14!129;UBERON:0004185!2.17e-14!129;UBERON:0000077!1.97e-13!130;UBERON:0000062!4.48e-12!511;UBERON:0001048!6.95e-12!168;UBERON:0001041!1.48e-11!98;UBERON:0000467!1.71e-11!625;UBERON:0001004!1.79e-11!72;UBERON:0000064!1.86e-11!219;UBERON:0000480!1.92e-11!626;UBERON:0000466!2.15e-11!126;UBERON:0004111!2.15e-11!241;UBERON:0000481!9.91e-11!347;UBERON:0005177!1.27e-10!107;UBERON:0000477!1.47e-10!286;UBERON:0005911!1.96e-10!82;UBERON:0000468!3.57e-10!659;UBERON:0000483!4.96e-10!309;UBERON:0000119!6.90e-10!312;UBERON:0008947!2.41e-09!38;UBERON:0003258!2.41e-09!38;UBERON:0000065!3.11e-09!53;UBERON:0009569!3.88e-09!113;UBERON:0007023!5.44e-09!115;UBERON:0000464!1.74e-08!104;UBERON:0005157!1.82e-08!51;UBERON:0005181!2.87e-08!35;UBERON:0003104!4.71e-08!238;UBERON:0009142!4.71e-08!238;UBERON:0002530!5.41e-08!59;UBERON:0002365!6.24e-08!31;UBERON:0002330!6.24e-08!31;UBERON:0005178!7.08e-08!34;UBERON:0002224!7.08e-08!34;UBERON:0005153!1.48e-07!37;UBERON:0000923!4.26e-07!604;UBERON:0005291!4.26e-07!604;UBERON:0006598!4.26e-07!604;UBERON:0002532!4.26e-07!604;UBERON:0002050!6.58e-07!605;UBERON:0005423!6.58e-07!605;UBERON:0005631!7.96e-07!14;UBERON:0000158!7.96e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;1.51e-09;44!UBERON:0005181;2.22e-08;35!UBERON:0002365;2.75e-08;31!UBERON:0002330;2.75e-08;31!UBERON:0005178;3.56e-08;34!UBERON:0002224;3.56e-08;34!UBERON:0001004;2.67e-07;65!UBERON:0000072;5.38e-07;37 | |ontology_enrichment_uberon_v019=UBERON:0000065;1.51e-09;44!UBERON:0005181;2.22e-08;35!UBERON:0002365;2.75e-08;31!UBERON:0002330;2.75e-08;31!UBERON:0005178;3.56e-08;34!UBERON:0002224;3.56e-08;34!UBERON:0001004;2.67e-07;65!UBERON:0000072;5.38e-07;37 | ||
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|phase1_expression=0.181678379270557,1.07050261945492,0.986680828671798,1.0007329835313,1.34088328328186,0.872338524100369,0,0,2.08948502559871,3.19454117451962,4.88460817580699,12.2327168392896,8.17677632508206,0.37129905888014,1.65698687863958,0.672325146451775,1.80808358407193,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0,0,0.61130724598361,0.328402357799783,0.472264687882075,4.32700704533794,0.383829398097213,0.77408061658038,3.67768489791571,11.4458249135735,11.4623743151704,0,0,0,0,0,0.217010870715852,1.34349284543955,1.29557466407592,1.28787783817093,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,1.93645405075148,0,0.188242339542605,1.09162460023138,0.449446968890169,0.306083892370903,0.641858054152187,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0.793165398882963,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0.289648807765598,7.31420598941885,0.670700859703636,1.79007586580942,0.722878304769133,2.50668955317945,1.73815822752988,0.795285947051099,0.973269740605272,0.378139268656271,0.665188192387692,1.58102614247627,2.68507104770311,11.2931539370688,10.7527488407485,7.7891374477124,9.75126528875897,6.1160661838678,0,0,0,1.78886166630035,0,2.08284300964557,2.82653970962005,1.25849830862972,1.6507082516404,2.29894463190492,4.65150166504792,7.47109151642091,4.35136796594071,3.62546385398232,0.760272105718513,8.7862340717341,1.10298924103761,1.62028389576352,2.23249320710199,2.91888184414021,1.80178368773316,3.06633274931766,0.949265659568129,0.183201743930407,0,0,8.28578699070815,0.993943903390637,0.633152558322899,1.58891016975863,0.286836620748814,0.709336764396714,1.12135520028461,5.33744978648525,0.49333509683432,2.48968828319813,2.96363478553314,3.43269996538263,0.454072282934794,0,0.70296429550139,0.624320153660641,0,0.149448680551801,0,0,0,0.408308342509787,0.491337269247072,0.206651562351531,0,1.97813543422845,0.910161361938026,1.43723628363248,0,0.125118519871964,0.277064115484183,0,0.30648779579902,2.55404700141215,0.794025282120147,0.89694817844431,0.640672166455702,0.211931901159562,1.80054657650641,0.412210116953756,1.28820270022815,0.558350568994769,0.675105328965065,1.07180705677318,0,0.368199594569197,0.161646056818812,0.355009592516614,0.201504196455281,0,4.05847791642923,5.18217629122586,4.01526433544605,0,0,0.348581828608555,0.518305275076852,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0,0,2.01121560067735,2.69735504124963,3.37415441836875,3.08823123650703,2.39667388501647,2.37270619111097,2.29213223872279,2.94332197688019,1.15424147083917,5.16708818237254,4.20725321410337,0.4115740113314,0,12.6755034821831,13.7595810334868,6.49868897349544,0,1.72183813960359,2.05881372358231,5.48751427043128,8.99214026060957,5.62962245505133,7.22189872236531,0.651616610620649,0,2.88662684050547,0.34779121492523,0.70445216541493,4.04226053731007,3.24089858803628,3.80508304469197,2.37061319387782,0.858486162094873,1.23108503043699,1.17002132569619,1.63494278517601,3.74935335947108,1.84780341018745,3.26082723657489,6.17953806649653,5.23141089325132,5.36735750831296,1.97065295158377,0.704387472105808,0.829312462163088,1.15295962733569,1.8936365013957,0,0.381988425558278,2.34434894420094,1.71072446022705,0.102827492703324,0.600686115687835,0.571652865261156,0.336393253036082,1.30788020649984,0.22001485746285,0.646358578788889,0,0,0.797814349754612,0,0,0,0.266422179016099,1.28680194292333,0.542621605391443,0,0.325736184293735,0.710783897485092,0.791951872933429,0.904318131178758,2.61460037580088,1.59956785891291,0,1.50677127429638,2.10833939483032,0.718874566474748,1.14861935834114,0,0.144781306667579,1.2328579353023,0.358121926479791,0,0.394061520403854,0.431255149719035,0.128343036279748,0,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0.828831026872071,0.613457458595699,0,0.542530047399471,0.207970861530807,0.535286966391485,1.41932173530541,1.63997980989798,1.50473049863859,2.27407504055985,0,0.664225598535437,0.184369168541703,0.434418072340414,0.391602314925481,0,0,0.215714200818617,0.320182673410333,3.03127571446259,8.32177197552485,9.67648938654977,0.496215615637554,0.306923946576125,0,0.896974044789907,0.511707249066704,0.482561763430822,1.48418066444991,0.308419387605311,0.355123450626254,0.0821271560138091,0,0.232420756919918,2.05461064305758,4.21063587636898,5.24861636934609,0.459257792658427,0.364182336013434,1.31124414959424,4.51199612907412,1.23224539367064,1.56869953835371,0,0,6.8240030442538,2.72149928442425,0.647747748306418,6.16909010761157,0,0.501689773854853,8.41091701048626,4.98645605357235,2.46262230194396,0.219259876645935,0.522870902049801,2.3080511260475,1.96808787419823,6.83294628795036,8.75848599005639,0,0,17.2279661398852,9.1008434445113,1.6068392984416,0.290012154876366,0.770243085573222,0.614014698904518,0.41350971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| ||
|short_description=p3@EPAS1 | |short_description=p3@EPAS1 | ||
}} | }} |
Revision as of 00:11, 16 November 2012
Short description: | p3@EPAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_EPAS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000467888_5end |
EntrezGene: | EPAS1 |
HGNC: | 3374 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.49e-36 | 253 |
endodermal cell | 2.59e-14 | 58 |
endo-epithelial cell | 1.85e-11 | 42 |
squamous epithelial cell | 1.02e-10 | 63 |
respiratory epithelial cell | 6.72e-09 | 13 |
lining cell | 5.95e-08 | 58 |
barrier cell | 5.95e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.14e-20 | 160 |
endoderm | 1.14e-20 | 160 |
presumptive endoderm | 1.14e-20 | 160 |
subdivision of digestive tract | 5.29e-15 | 118 |
digestive system | 8.87e-15 | 145 |
digestive tract | 8.87e-15 | 145 |
primitive gut | 8.87e-15 | 145 |
foregut | 3.79e-13 | 87 |
trunk region element | 4.05e-12 | 101 |
primordium | 1.15e-11 | 160 |
respiratory system | 1.33e-11 | 74 |
respiratory primordium | 9.06e-11 | 38 |
endoderm of foregut | 9.06e-11 | 38 |
endo-epithelium | 1.30e-10 | 82 |
subdivision of trunk | 5.25e-10 | 112 |
respiratory tract | 6.29e-10 | 54 |
thoracic segment organ | 9.72e-10 | 35 |
thoracic cavity element | 2.90e-09 | 34 |
thoracic cavity | 2.90e-09 | 34 |
exocrine gland | 1.36e-08 | 31 |
exocrine system | 1.36e-08 | 31 |
gland | 1.82e-08 | 59 |
epithelial fold | 2.56e-08 | 47 |
epithelial bud | 4.05e-08 | 37 |
extraembryonic membrane | 1.06e-07 | 14 |
membranous layer | 1.06e-07 | 14 |
renal system | 3.20e-07 | 48 |
anatomical conduit | 5.02e-07 | 240 |
thoracic segment of trunk | 7.36e-07 | 52 |
urinary system structure | 7.74e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.58e-08 | 106 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.