FFCP PHASE1:Hg19::chr1:32800303..32800316,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000115!5.07e-07!35 | |ontology_enrichment_celltype=CL:0000115!5.07e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.90e-10;6!CL:0000404;2.90e-10;6!CL:0000148;5.33e-10;10!CL:0000147;5.60e-08;14!CL:0000115;1.39e-07;36!CL:0002319;1.82e-07;25!CL:0000860;1.88e-07;33!CL:0002057;1.88e-07;33!CL:1000746;3.57e-07;7!CL:1000612;3.57e-07;7!CL:0002322;6.56e-07;5 | |ontology_enrichment_celltype_v019=CL:0000540;2.90e-10;6!CL:0000404;2.90e-10;6!CL:0000148;5.33e-10;10!CL:0000147;5.60e-08;14!CL:0000115;1.39e-07;36!CL:0002319;1.82e-07;25!CL:0000860;1.88e-07;33!CL:0002057;1.88e-07;33!CL:1000746;3.57e-07;7!CL:1000612;3.57e-07;7!CL:0002322;6.56e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.72e-10,6;CL:0000031,2.72e-10,6;CL:0000404,2.72e-10,6;CL:0000133,5.67e-10,59;CL:0000148,7.55e-10,10;CL:0000541,7.55e-10,10;CL:0000047,2.11e-09,8;CL:0000115,1.29e-08,36;CL:0000147,6.47e-08,14;CL:0002319,1.82e-07,25;CL:1000746,2.97e-07,7;CL:1000612,2.97e-07,7;CL:0000221,6.72e-07,72;CL:0002322,9.32e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;2.90e-10;6 | |ontology_enrichment_development_v019=CL:0000031;2.90e-10;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.29e-10!86;UBERON:0002346!1.57e-10!90;UBERON:0000073!3.19e-10!94;UBERON:0001016!3.19e-10!94;UBERON:0003075!3.27e-10!86;UBERON:0007284!3.27e-10!86;UBERON:0001017!4.98e-10!82;UBERON:0001049!8.69e-09!57;UBERON:0005068!8.69e-09!57;UBERON:0006241!8.69e-09!57;UBERON:0007135!8.69e-09!57;UBERON:0000025!2.12e-08!194;UBERON:0003056!2.60e-08!61;UBERON:0002020!6.31e-08!34;UBERON:0003528!6.31e-08!34;UBERON:0001893!7.78e-08!34;UBERON:0000483!1.11e-07!309;UBERON:0002791!1.18e-07!33;UBERON:0000119!1.58e-07!312;UBERON:0002616!3.09e-07!59;UBERON:0001869!7.02e-07!32;UBERON:0002780!7.58e-07!41;UBERON:0001890!7.58e-07!41;UBERON:0006240!7.58e-07!41 | |ontology_enrichment_uberon=UBERON:0005743!1.29e-10!86;UBERON:0002346!1.57e-10!90;UBERON:0000073!3.19e-10!94;UBERON:0001016!3.19e-10!94;UBERON:0003075!3.27e-10!86;UBERON:0007284!3.27e-10!86;UBERON:0001017!4.98e-10!82;UBERON:0001049!8.69e-09!57;UBERON:0005068!8.69e-09!57;UBERON:0006241!8.69e-09!57;UBERON:0007135!8.69e-09!57;UBERON:0000025!2.12e-08!194;UBERON:0003056!2.60e-08!61;UBERON:0002020!6.31e-08!34;UBERON:0003528!6.31e-08!34;UBERON:0001893!7.78e-08!34;UBERON:0000483!1.11e-07!309;UBERON:0002791!1.18e-07!33;UBERON:0000119!1.58e-07!312;UBERON:0002616!3.09e-07!59;UBERON:0001869!7.02e-07!32;UBERON:0002780!7.58e-07!41;UBERON:0001890!7.58e-07!41;UBERON:0006240!7.58e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;3.57e-07;7!UBERON:0001229;3.57e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000074;3.57e-07;7!UBERON:0001229;3.57e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.58e-12,81;UBERON:0001016,2.06e-11,89;UBERON:0003075,3.39e-11,82;UBERON:0007284,3.39e-11,82;UBERON:0002346,4.65e-11,86;UBERON:0001049,3.25e-09,56;UBERON:0005068,3.25e-09,56;UBERON:0006241,3.25e-09,56;UBERON:0007135,3.25e-09,56;UBERON:0003056,9.41e-09,61;UBERON:0000025,1.37e-08,192;UBERON:0010371,3.09e-08,104;UBERON:0000073,3.34e-08,53;UBERON:0002616,3.34e-08,53;UBERON:0010532,2.97e-07,7;UBERON:0000074,2.97e-07,7;UBERON:0001229,2.97e-07,7;UBERON:0001230,2.97e-07,7;UBERON:0003220,2.97e-07,7;UBERON:0005749,2.97e-07,7;UBERON:0004199,2.97e-07,7;UBERON:0004209,2.97e-07,7;UBERON:0004198,2.97e-07,7;UBERON:0004121,4.84e-07,171;UBERON:0000924,4.84e-07,171;UBERON:0006601,4.84e-07,171 | |||
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| ||
|short_description=p@chr1:32800303..32800316,- | |short_description=p@chr1:32800303..32800316,- | ||
}} | }} |
Revision as of 23:04, 15 November 2012
Short description: | p@chr1:32800303..32800316, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:32800303..32800316, - |
Coexpression cluster: | C1476_Neurons_iPS_occipital_temporal_parietal_duodenum_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.72e-10 | 6 |
neuroblast | 2.72e-10 | 6 |
electrically signaling cell | 2.72e-10 | 6 |
neurectodermal cell | 5.67e-10 | 59 |
melanocyte | 7.55e-10 | 10 |
melanoblast | 7.55e-10 | 10 |
neuronal stem cell | 2.11e-09 | 8 |
endothelial cell | 1.29e-08 | 36 |
pigment cell | 6.47e-08 | 14 |
neural cell | 1.82e-07 | 25 |
glomerular cell | 2.97e-07 | 7 |
kidney corpuscule cell | 2.97e-07 | 7 |
ectodermal cell | 6.72e-07 | 72 |
embryonic stem cell | 9.32e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.58e-12 | 81 |
nervous system | 2.06e-11 | 89 |
neural plate | 3.39e-11 | 82 |
presumptive neural plate | 3.39e-11 | 82 |
neurectoderm | 4.65e-11 | 86 |
neural tube | 3.25e-09 | 56 |
neural rod | 3.25e-09 | 56 |
future spinal cord | 3.25e-09 | 56 |
neural keel | 3.25e-09 | 56 |
pre-chordal neural plate | 9.41e-09 | 61 |
tube | 1.37e-08 | 192 |
ecto-epithelium | 3.09e-08 | 104 |
regional part of nervous system | 3.34e-08 | 53 |
regional part of brain | 3.34e-08 | 53 |
primitive nephron | 2.97e-07 | 7 |
renal glomerulus | 2.97e-07 | 7 |
renal corpuscle | 2.97e-07 | 7 |
glomerular capsule | 2.97e-07 | 7 |
metanephric mesenchyme | 2.97e-07 | 7 |
glomerular tuft | 2.97e-07 | 7 |
S-shaped body | 2.97e-07 | 7 |
renal vesicle | 2.97e-07 | 7 |
comma-shaped body | 2.97e-07 | 7 |
ectoderm-derived structure | 4.84e-07 | 171 |
ectoderm | 4.84e-07 | 171 |
presumptive ectoderm | 4.84e-07 | 171 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.