FFCP PHASE1:Mm9::chr9:91262990..91263011,-: Difference between revisions
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|id=chr9:91262990..91263011,- | |id=chr9:91262990..91263011,- | ||
|ontology_enrichment_celltype=CL:0000117!1.19e-15!23;CL:0000337!1.19e-15!23;CL:0000540!1.44e-10!33;CL:0000047!1.44e-10!33;CL:0000031!1.44e-10!33;CL:0000404!1.44e-10!33;CL:0002319!5.92e-09!43;CL:0000221!1.25e-08!44;CL:0000133!1.25e-08!44;CL:0000393!3.43e-08!39;CL:0000211!3.43e-08!39;CL:0000055!5.69e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.19e-15!23;CL:0000337!1.19e-15!23;CL:0000540!1.44e-10!33;CL:0000047!1.44e-10!33;CL:0000031!1.44e-10!33;CL:0000404!1.44e-10!33;CL:0002319!5.92e-09!43;CL:0000221!1.25e-08!44;CL:0000133!1.25e-08!44;CL:0000393!3.43e-08!39;CL:0000211!3.43e-08!39;CL:0000055!5.69e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.11e-27,3;CL:0000117,1.47e-18,23;CL:0000337,1.47e-18,23;CL:0000540,7.15e-13,33;CL:0000047,7.15e-13,33;CL:0000031,7.15e-13,33;CL:0000404,7.15e-13,33;CL:0002612,9.50e-13,3;CL:0000120,2.42e-12,3;CL:0000393,7.52e-11,39;CL:0000211,7.52e-11,39;CL:0002319,8.20e-10,43;CL:0000221,1.39e-09,44;CL:0000133,1.39e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.38e-12!73;UBERON:0005743!5.38e-12!73;UBERON:0000073!1.91e-11!75;UBERON:0001016!1.91e-11!75;UBERON:0001049!4.71e-11!52;UBERON:0005068!4.71e-11!52;UBERON:0006241!4.71e-11!52;UBERON:0007135!4.71e-11!52;UBERON:0003076!8.22e-09!12;UBERON:0003057!8.22e-09!12;UBERON:0002240!9.46e-09!6;UBERON:0005174!9.46e-09!6;UBERON:0001137!9.46e-09!6;UBERON:0001948!5.82e-08!5;UBERON:0002315!5.82e-08!5;UBERON:0002346!9.97e-08!71;UBERON:0003075!9.97e-08!71;UBERON:0007284!9.97e-08!71;UBERON:0002020!1.46e-07!34;UBERON:0002616!1.84e-07!49;UBERON:0004121!1.97e-07!102;UBERON:0000924!1.97e-07!102;UBERON:0006601!1.97e-07!102;UBERON:0000955!3.29e-07!50;UBERON:0006238!3.29e-07!50;UBERON:0002420!6.26e-07!8;UBERON:0007245!6.26e-07!8;UBERON:0010009!6.26e-07!8;UBERON:0010011!6.26e-07!8;UBERON:0000454!6.26e-07!8 | |ontology_enrichment_uberon=UBERON:0001017!5.38e-12!73;UBERON:0005743!5.38e-12!73;UBERON:0000073!1.91e-11!75;UBERON:0001016!1.91e-11!75;UBERON:0001049!4.71e-11!52;UBERON:0005068!4.71e-11!52;UBERON:0006241!4.71e-11!52;UBERON:0007135!4.71e-11!52;UBERON:0003076!8.22e-09!12;UBERON:0003057!8.22e-09!12;UBERON:0002240!9.46e-09!6;UBERON:0005174!9.46e-09!6;UBERON:0001137!9.46e-09!6;UBERON:0001948!5.82e-08!5;UBERON:0002315!5.82e-08!5;UBERON:0002346!9.97e-08!71;UBERON:0003075!9.97e-08!71;UBERON:0007284!9.97e-08!71;UBERON:0002020!1.46e-07!34;UBERON:0002616!1.84e-07!49;UBERON:0004121!1.97e-07!102;UBERON:0000924!1.97e-07!102;UBERON:0006601!1.97e-07!102;UBERON:0000955!3.29e-07!50;UBERON:0006238!3.29e-07!50;UBERON:0002420!6.26e-07!8;UBERON:0007245!6.26e-07!8;UBERON:0010009!6.26e-07!8;UBERON:0010011!6.26e-07!8;UBERON:0000454!6.26e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,6.57e-17,5;UBERON:0002435,6.57e-17,5;UBERON:0000204,6.57e-17,5;UBERON:0010082,6.57e-17,5;UBERON:0002257,9.50e-13,3;UBERON:0002420,8.20e-11,8;UBERON:0007245,8.20e-11,8;UBERON:0010009,8.20e-11,8;UBERON:0010011,8.20e-11,8;UBERON:0000454,8.20e-11,8;UBERON:0001948,5.11e-08,5;UBERON:0002315,5.11e-08,5;UBERON:0001017,2.37e-07,73;UBERON:0003076,2.88e-07,12;UBERON:0003057,2.88e-07,12;UBERON:0001016,3.85e-07,75;UBERON:0002240,7.99e-07,6;UBERON:0005174,7.99e-07,6;UBERON:0001137,7.99e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.26766280701236,0,1.77858959222228,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0.255374676170375,0.153606533256243,5.40733779693795,5.94669683415663,2.6045668527838,0.279182999001381,0.56276261003168,0.30559649555362,0.883885756421003,1.56608848879013,3.91438836233131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,3.77004072264219,0,0,0,0,0,0,0,0.521472960576829,0.511430914660661,0,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.735374033800057,0.222246727801615,1.03017528619447,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.34461281373368,0,0.463537303779422,0.38581844092741,0,0.294397840268795,0,0.887379030796687,0.238436189947321,0.436039249896986,0.658765662907314,0.25384382367503,0.548783918618318,0.789209134313529,0.543216455383447,0,0.118635018124174,0,0,0.464810523557898,0.578719832943424,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.26766280701236,0,1.77858959222228,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0.255374676170375,0.153606533256243,5.40733779693795,5.94669683415663,2.6045668527838,0.279182999001381,0.56276261003168,0.30559649555362,0.883885756421003,1.56608848879013,3.91438836233131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,3.77004072264219,0,0,0,0,0,0,0,0.521472960576829,0.511430914660661,0,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.735374033800057,0.222246727801615,1.03017528619447,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.34461281373368,0,0.463537303779422,0.38581844092741,0,0.294397840268795,0,0.887379030796687,0.238436189947321,0.436039249896986,0.658765662907314,0.25384382367503,0.548783918618318,0.789209134313529,0.543216455383447,0,0.118635018124174,0,0,0.464810523557898,0.578719832943424,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr9:91262990..91263011,- | |short_description=p@chr9:91262990..91263011,- | ||
}} | }} |
Revision as of 00:27, 15 November 2012
Short description: | p@chr9:91262990..91263011, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:91262990..91263011, - |
Coexpression cluster: | MCL_coexpression_mm9:671 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.11e-27 | 3 |
CNS neuron (sensu Vertebrata) | 1.47e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.47e-18 | 23 |
neuron | 7.15e-13 | 33 |
neuronal stem cell | 7.15e-13 | 33 |
neuroblast | 7.15e-13 | 33 |
electrically signaling cell | 7.15e-13 | 33 |
neuron of the ventral spinal cord | 9.50e-13 | 3 |
granule cell | 2.42e-12 | 3 |
electrically responsive cell | 7.52e-11 | 39 |
electrically active cell | 7.52e-11 | 39 |
neural cell | 8.20e-10 | 43 |
ectodermal cell | 1.39e-09 | 44 |
neurectodermal cell | 1.39e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 6.57e-17 | 5 |
striatum | 6.57e-17 | 5 |
ventral part of telencephalon | 6.57e-17 | 5 |
future corpus striatum | 6.57e-17 | 5 |
ventral horn of spinal cord | 9.50e-13 | 3 |
basal ganglion | 8.20e-11 | 8 |
nuclear complex of neuraxis | 8.20e-11 | 8 |
aggregate regional part of brain | 8.20e-11 | 8 |
collection of basal ganglia | 8.20e-11 | 8 |
cerebral subcortex | 8.20e-11 | 8 |
regional part of spinal cord | 5.11e-08 | 5 |
gray matter of spinal cord | 5.11e-08 | 5 |
central nervous system | 2.37e-07 | 73 |
posterior neural tube | 2.88e-07 | 12 |
chordal neural plate | 2.88e-07 | 12 |
nervous system | 3.85e-07 | 75 |
spinal cord | 7.99e-07 | 6 |
dorsal region element | 7.99e-07 | 6 |
dorsum | 7.99e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.