FFCP PHASE1:Mm9::chr12:15822402..15822419,-: Difference between revisions
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|id=chr12:15822402..15822419,- | |id=chr12:15822402..15822419,- | ||
|ontology_enrichment_celltype=CL:0000117!1.98e-07!23;CL:0000337!1.98e-07!23 | |ontology_enrichment_celltype=CL:0000117!1.98e-07!23;CL:0000337!1.98e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002611,2.13e-10,2;CL:0000624,5.12e-10,8;CL:0000791,6.35e-09,9;CL:0000789,6.35e-09,9;CL:0002420,6.35e-09,9;CL:0002419,6.35e-09,9;CL:0000790,6.35e-09,9;CL:0000120,1.78e-07,3;CL:0000084,2.51e-07,11;CL:0000827,2.51e-07,11;CL:0000838,9.98e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.55e-11!86;UBERON:0000153!6.79e-11!94;UBERON:0002346!1.14e-08!71;UBERON:0003075!1.14e-08!71;UBERON:0007284!1.14e-08!71;UBERON:0004121!6.69e-08!102;UBERON:0000924!6.69e-08!102;UBERON:0006601!6.69e-08!102;UBERON:0001017!2.22e-07!73;UBERON:0005743!2.22e-07!73;UBERON:0003056!3.91e-07!49;UBERON:0000073!4.86e-07!75;UBERON:0001016!4.86e-07!75;UBERON:0000477!9.08e-07!154;UBERON:0000033!9.97e-07!63 | |ontology_enrichment_uberon=UBERON:0007811!1.55e-11!86;UBERON:0000153!6.79e-11!94;UBERON:0002346!1.14e-08!71;UBERON:0003075!1.14e-08!71;UBERON:0007284!1.14e-08!71;UBERON:0004121!6.69e-08!102;UBERON:0000924!6.69e-08!102;UBERON:0006601!6.69e-08!102;UBERON:0001017!2.22e-07!73;UBERON:0005743!2.22e-07!73;UBERON:0003056!3.91e-07!49;UBERON:0000073!4.86e-07!75;UBERON:0001016!4.86e-07!75;UBERON:0000477!9.08e-07!154;UBERON:0000033!9.97e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,1.17e-12,36;UBERON:0002256,2.13e-10,2;UBERON:0000153,2.30e-10,43;UBERON:0000970,1.19e-09,9;UBERON:0000019,1.19e-09,9;UBERON:0000047,1.19e-09,9;UBERON:0010312,1.19e-09,9;UBERON:0004088,1.19e-09,9;UBERON:0002104,1.19e-09,9;UBERON:0001456,1.19e-09,9;UBERON:0003072,1.19e-09,9;UBERON:0004128,1.19e-09,9;UBERON:0003071,1.19e-09,9;UBERON:0001444,6.46e-08,11;UBERON:0002370,2.90e-07,23;UBERON:0000974,2.90e-07,23;UBERON:0004807,2.90e-07,23;UBERON:0005058,2.90e-07,23;UBERON:0003351,2.90e-07,23;UBERON:0009113,2.90e-07,23;UBERON:0003295,2.90e-07,23;UBERON:0009722,2.90e-07,23;UBERON:0005562,2.90e-07,23;UBERON:0007690,2.90e-07,23;UBERON:0000020,2.91e-07,12;UBERON:0001032,2.91e-07,12;UBERON:0004456,2.91e-07,12;UBERON:0006562,6.09e-07,24;UBERON:0003408,6.09e-07,24;UBERON:0001557,6.09e-07,24;UBERON:0001042,6.09e-07,24;UBERON:0008814,6.09e-07,24;UBERON:0009145,6.09e-07,24 | |||
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| ||
|short_description=p@chr12:15822402..15822419,- | |short_description=p@chr12:15822402..15822419,- | ||
}} | }} |
Revision as of 23:30, 14 November 2012
Short description: | p@chr12:15822402..15822419, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:15822402..15822419, - |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 2.13e-10 | 2 |
CD4-positive, alpha-beta T cell | 5.12e-10 | 8 |
mature alpha-beta T cell | 6.35e-09 | 9 |
alpha-beta T cell | 6.35e-09 | 9 |
immature T cell | 6.35e-09 | 9 |
mature T cell | 6.35e-09 | 9 |
immature alpha-beta T cell | 6.35e-09 | 9 |
granule cell | 1.78e-07 | 3 |
T cell | 2.51e-07 | 11 |
pro-T cell | 2.51e-07 | 11 |
lymphoid lineage restricted progenitor cell | 9.98e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
craniocervical region | 1.17e-12 | 36 |
dorsal horn of spinal cord | 2.13e-10 | 2 |
anterior region of body | 2.30e-10 | 43 |
eye | 1.19e-09 | 9 |
camera-type eye | 1.19e-09 | 9 |
simple eye | 1.19e-09 | 9 |
immature eye | 1.19e-09 | 9 |
ocular region | 1.19e-09 | 9 |
visual system | 1.19e-09 | 9 |
face | 1.19e-09 | 9 |
optic cup | 1.19e-09 | 9 |
optic vesicle | 1.19e-09 | 9 |
eye primordium | 1.19e-09 | 9 |
subdivision of head | 6.46e-08 | 11 |
thymus | 2.90e-07 | 23 |
neck | 2.90e-07 | 23 |
respiratory system epithelium | 2.90e-07 | 23 |
hemolymphoid system gland | 2.90e-07 | 23 |
pharyngeal epithelium | 2.90e-07 | 23 |
thymic region | 2.90e-07 | 23 |
pharyngeal gland | 2.90e-07 | 23 |
entire pharyngeal arch endoderm | 2.90e-07 | 23 |
thymus primordium | 2.90e-07 | 23 |
early pharyngeal endoderm | 2.90e-07 | 23 |
sense organ | 2.91e-07 | 12 |
sensory system | 2.91e-07 | 12 |
entire sense organ system | 2.91e-07 | 12 |
pharynx | 6.09e-07 | 24 |
gland of gut | 6.09e-07 | 24 |
upper respiratory tract | 6.09e-07 | 24 |
chordate pharynx | 6.09e-07 | 24 |
pharyngeal arch system | 6.09e-07 | 24 |
pharyngeal region of foregut | 6.09e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.