FFCP PHASE1:Mm9::chr4:130374681..130374703,+: Difference between revisions
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|id=chr4:130374681..130374703,+ | |id=chr4:130374681..130374703,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.82e-12!50;CL:0000393!2.04e-11!39;CL:0000211!2.04e-11!39;CL:0002319!6.99e-11!43;CL:0000221!7.91e-11!44;CL:0000133!7.91e-11!44;CL:0000540!9.24e-11!33;CL:0000047!9.24e-11!33;CL:0000031!9.24e-11!33;CL:0000404!9.24e-11!33;CL:0000117!3.52e-10!23;CL:0000337!3.52e-10!23 | |ontology_enrichment_celltype=CL:0000055!4.82e-12!50;CL:0000393!2.04e-11!39;CL:0000211!2.04e-11!39;CL:0002319!6.99e-11!43;CL:0000221!7.91e-11!44;CL:0000133!7.91e-11!44;CL:0000540!9.24e-11!33;CL:0000047!9.24e-11!33;CL:0000031!9.24e-11!33;CL:0000404!9.24e-11!33;CL:0000117!3.52e-10!23;CL:0000337!3.52e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.04e-24,39;CL:0000211,9.04e-24,39;CL:0000117,3.62e-23,23;CL:0000337,3.62e-23,23;CL:0000540,2.53e-22,33;CL:0000047,2.53e-22,33;CL:0000031,2.53e-22,33;CL:0000404,2.53e-22,33;CL:0002319,2.77e-21,43;CL:0000221,1.22e-20,44;CL:0000133,1.22e-20,44;CL:0002321,7.68e-14,70;CL:0000723,1.26e-13,91;CL:0000048,1.26e-13,91;CL:0000034,2.95e-12,97;CL:0002194,1.10e-08,4;CL:0000766,1.10e-08,4;CL:0000234,1.10e-08,4;CL:0000576,1.10e-08,4;CL:0000235,1.10e-08,4;CL:0000864,1.10e-08,4;CL:0002009,1.10e-08,4;CL:0000040,1.10e-08,4;CL:0000559,1.10e-08,4;CL:0002092,3.12e-07,3;CL:0002540,3.12e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.29e-16!75;UBERON:0001016!1.29e-16!75;UBERON:0001017!4.06e-16!73;UBERON:0005743!4.06e-16!73;UBERON:0004121!4.02e-15!102;UBERON:0000924!4.02e-15!102;UBERON:0006601!4.02e-15!102;UBERON:0002346!2.22e-11!71;UBERON:0003075!2.22e-11!71;UBERON:0007284!2.22e-11!71;UBERON:0001049!8.18e-10!52;UBERON:0005068!8.18e-10!52;UBERON:0006241!8.18e-10!52;UBERON:0007135!8.18e-10!52;UBERON:0002020!1.48e-09!34;UBERON:0000955!1.87e-08!50;UBERON:0006238!1.87e-08!50;UBERON:0002616!4.28e-08!49;UBERON:0002791!7.73e-07!29;UBERON:0003528!7.73e-07!29;UBERON:0001893!7.73e-07!29;UBERON:0000033!8.38e-07!63 | |ontology_enrichment_uberon=UBERON:0000073!1.29e-16!75;UBERON:0001016!1.29e-16!75;UBERON:0001017!4.06e-16!73;UBERON:0005743!4.06e-16!73;UBERON:0004121!4.02e-15!102;UBERON:0000924!4.02e-15!102;UBERON:0006601!4.02e-15!102;UBERON:0002346!2.22e-11!71;UBERON:0003075!2.22e-11!71;UBERON:0007284!2.22e-11!71;UBERON:0001049!8.18e-10!52;UBERON:0005068!8.18e-10!52;UBERON:0006241!8.18e-10!52;UBERON:0007135!8.18e-10!52;UBERON:0002020!1.48e-09!34;UBERON:0000955!1.87e-08!50;UBERON:0006238!1.87e-08!50;UBERON:0002616!4.28e-08!49;UBERON:0002791!7.73e-07!29;UBERON:0003528!7.73e-07!29;UBERON:0001893!7.73e-07!29;UBERON:0000033!8.38e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.13e-22,73;UBERON:0001016,1.49e-21,75;UBERON:0002020,6.98e-16,34;UBERON:0004121,4.35e-15,95;UBERON:0000924,4.35e-15,95;UBERON:0006601,4.35e-15,95;UBERON:0000073,9.07e-14,54;UBERON:0001049,4.63e-12,52;UBERON:0005068,4.63e-12,52;UBERON:0006241,4.63e-12,52;UBERON:0007135,4.63e-12,52;UBERON:0002240,3.98e-11,6;UBERON:0005174,3.98e-11,6;UBERON:0001137,3.98e-11,6;UBERON:0002346,9.72e-11,64;UBERON:0003075,9.72e-11,64;UBERON:0007284,9.72e-11,64;UBERON:0003528,8.80e-10,29;UBERON:0002791,8.80e-10,29;UBERON:0001893,8.80e-10,29;UBERON:0001948,1.08e-09,5;UBERON:0002315,1.08e-09,5;UBERON:0010314,1.45e-09,92;UBERON:0002420,2.61e-09,8;UBERON:0007245,2.61e-09,8;UBERON:0010009,2.61e-09,8;UBERON:0010011,2.61e-09,8;UBERON:0000454,2.61e-09,8;UBERON:0010371,1.18e-08,73;UBERON:0003080,4.59e-07,40;UBERON:0003076,8.20e-07,12;UBERON:0003057,8.20e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,1.28629718017973,2.0057340795713,1.54701627683233,1.41621522601718,4.7609188134483,1.26766280701236,0.338844532069132,0.889294796111139,10.7987966073768,17.7995945262055,9.2362414942993,6.2916023208865,3.84218305321555,1.65903379693564,2.43010688997043,0,2.85650984403804,4.8591079009355,0.734944795289724,0.479227355091182,0,1.10115880999389,1.65993539510744,1.22885226604995,2.37395317914349,3.01909223887952,1.04182674111352,1.3959149950069,1.12552522006336,2.59757021220577,7.36571463684169,4.27115042397309,1.3047961207771,0.681535739998656,0.453429360640713,0,0.860423876981386,0,0.539703191637817,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,7.25026074212081,1.48442139064825,0.520455980298408,0.913396434936424,0.922461989024234,2.11011696773672,0.823120949949934,0.628332956648377,0,1.01219549843938,0.884610551949874,0.323533699894818,0.441683036920787,1.45462575940567,0,0.585561594023094,1.8850203613211,0,0.11981512450592,0,0,1.04853447583376,0.457500602818626,1.00523481690292,0.347648640384553,0.255715457330331,0.83115217823824,0.811206315338788,0.305518091550949,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.816437989815934,0.640568601424249,0.655912071918102,0,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,0.834141747676794,0.348252166522167,0,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,0.23674473558521,0.393528463494808,0.154267112887378,0,0.268273401399619,0.583826711835847,0.16455984991348,0.32833492815819,0.162137619091711,0,0.878200461164203,0,0.420579897128254,0.720332286654991,0,0.264450566663544,0,0,0.515469845288373,0.403367049246685,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.316182685621286,0.147610147979602,0,0,1.1858105083486,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0.287696137450811,0,0,7.18841032636773,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.469380496577004,0.167506257441816,0.714130922658041,0.390267295715598,0.157635144106191,0.664394068946325,0,0.327726629431476,0.345369963731791,0.144649058581512,13.5712155545345,5.98296252200581,0.491764273019036,0,0.80275294993896,0.820481806145422,0,0,0,1.17131623288992,1.72338718186239,0.716906393857656,0.445597348164788,0,2.42886421004937,1.16902343164525,0.790575555893047,0.963963949265421,0.141940085208269,0.534196811001766,0.162886959353576,0.659880491890142,0,0,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,1.8542530201051,0.512612642393558,0.619160603889667,0.370389054739423,0.565105371014073,0.410082683163076,0.686334519619568,0,0,0,1.90934123603023,0,0.609958401380546,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0.523511883968059,0.129614973291793,0,1.12738587736838,0.149516546043979,0,0,0.387479470433193,0.337912250981556,0.58678619322877,0.13020438484395,0.209718688851422,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.201652370273681,0.487289403698762,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0,0,0,3.95326289831947,0.920650473014354,3.43737308063638,2.06223818812425,0,1.5107877947794,0,0.45032120322422,1.35942722695261,1.03552062350364,0.103787347584177,0.798049746802062,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.962757628775446,0.252697211763798,0.25347929989024,0,0.842773567228942,0.320125762024346,0.229741875822453,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,0.0941093804153306,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0.578719832943424,0.999242311751784,0,0,0.57386499620653,0.441182838239031,0.231867835620421 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| ||
|short_description=p@chr4:130374681..130374703,+ | |short_description=p@chr4:130374681..130374703,+ | ||
}} | }} |
Revision as of 19:48, 14 November 2012
Short description: | p@chr4:130374681..130374703, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:130374681..130374703, + |
Coexpression cluster: | MCL_coexpression_mm9:1087 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.04e-24 | 39 |
electrically active cell | 9.04e-24 | 39 |
CNS neuron (sensu Vertebrata) | 3.62e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.62e-23 | 23 |
neuron | 2.53e-22 | 33 |
neuronal stem cell | 2.53e-22 | 33 |
neuroblast | 2.53e-22 | 33 |
electrically signaling cell | 2.53e-22 | 33 |
neural cell | 2.77e-21 | 43 |
ectodermal cell | 1.22e-20 | 44 |
neurectodermal cell | 1.22e-20 | 44 |
embryonic cell | 7.68e-14 | 70 |
somatic stem cell | 1.26e-13 | 91 |
multi fate stem cell | 1.26e-13 | 91 |
stem cell | 2.95e-12 | 97 |
monopoietic cell | 1.10e-08 | 4 |
myeloid leukocyte | 1.10e-08 | 4 |
phagocyte | 1.10e-08 | 4 |
monocyte | 1.10e-08 | 4 |
macrophage | 1.10e-08 | 4 |
tissue-resident macrophage | 1.10e-08 | 4 |
macrophage dendritic cell progenitor | 1.10e-08 | 4 |
monoblast | 1.10e-08 | 4 |
promonocyte | 1.10e-08 | 4 |
bone marrow cell | 3.12e-07 | 3 |
mesenchymal stem cell of the bone marrow | 3.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.13e-22 | 73 |
nervous system | 1.49e-21 | 75 |
gray matter | 6.98e-16 | 34 |
ectoderm-derived structure | 4.35e-15 | 95 |
ectoderm | 4.35e-15 | 95 |
presumptive ectoderm | 4.35e-15 | 95 |
regional part of nervous system | 9.07e-14 | 54 |
neural tube | 4.63e-12 | 52 |
neural rod | 4.63e-12 | 52 |
future spinal cord | 4.63e-12 | 52 |
neural keel | 4.63e-12 | 52 |
spinal cord | 3.98e-11 | 6 |
dorsal region element | 3.98e-11 | 6 |
dorsum | 3.98e-11 | 6 |
neurectoderm | 9.72e-11 | 64 |
neural plate | 9.72e-11 | 64 |
presumptive neural plate | 9.72e-11 | 64 |
brain grey matter | 8.80e-10 | 29 |
regional part of telencephalon | 8.80e-10 | 29 |
telencephalon | 8.80e-10 | 29 |
regional part of spinal cord | 1.08e-09 | 5 |
gray matter of spinal cord | 1.08e-09 | 5 |
structure with developmental contribution from neural crest | 1.45e-09 | 92 |
basal ganglion | 2.61e-09 | 8 |
nuclear complex of neuraxis | 2.61e-09 | 8 |
aggregate regional part of brain | 2.61e-09 | 8 |
collection of basal ganglia | 2.61e-09 | 8 |
cerebral subcortex | 2.61e-09 | 8 |
ecto-epithelium | 1.18e-08 | 73 |
anterior neural tube | 4.59e-07 | 40 |
posterior neural tube | 8.20e-07 | 12 |
chordal neural plate | 8.20e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.