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FFCP PHASE1:Mm9::chrX:149078634..149078666,-: Difference between revisions

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|id=chrX:149078634..149078666,-
|id=chrX:149078634..149078666,-
|ontology_enrichment_celltype=CL:0000540!4.32e-19!33;CL:0000047!4.32e-19!33;CL:0000031!4.32e-19!33;CL:0000404!4.32e-19!33;CL:0000117!2.02e-15!23;CL:0000337!2.02e-15!23;CL:0000393!3.20e-14!39;CL:0000211!3.20e-14!39;CL:0000221!3.55e-14!44;CL:0000133!3.55e-14!44;CL:0002319!1.19e-13!43;CL:0000055!4.74e-10!50
|ontology_enrichment_celltype=CL:0000540!4.32e-19!33;CL:0000047!4.32e-19!33;CL:0000031!4.32e-19!33;CL:0000404!4.32e-19!33;CL:0000117!2.02e-15!23;CL:0000337!2.02e-15!23;CL:0000393!3.20e-14!39;CL:0000211!3.20e-14!39;CL:0000221!3.55e-14!44;CL:0000133!3.55e-14!44;CL:0002319!1.19e-13!43;CL:0000055!4.74e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,9.02e-22,33;CL:0000047,9.02e-22,33;CL:0000031,9.02e-22,33;CL:0000404,9.02e-22,33;CL:0000117,1.56e-19,23;CL:0000337,1.56e-19,23;CL:0000393,2.44e-17,39;CL:0000211,2.44e-17,39;CL:0000221,6.79e-16,44;CL:0000133,6.79e-16,44;CL:0002319,4.38e-15,43;CL:0002321,1.68e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.29e-26!75;UBERON:0001016!1.29e-26!75;UBERON:0001017!9.37e-26!73;UBERON:0005743!9.37e-26!73;UBERON:0004121!1.91e-24!102;UBERON:0000924!1.91e-24!102;UBERON:0006601!1.91e-24!102;UBERON:0002020!1.29e-19!34;UBERON:0002346!2.62e-18!71;UBERON:0003075!2.62e-18!71;UBERON:0007284!2.62e-18!71;UBERON:0001049!2.88e-18!52;UBERON:0005068!2.88e-18!52;UBERON:0006241!2.88e-18!52;UBERON:0007135!2.88e-18!52;UBERON:0000955!1.97e-16!50;UBERON:0006238!1.97e-16!50;UBERON:0000033!3.79e-16!63;UBERON:0002616!9.75e-16!49;UBERON:0002791!3.71e-15!29;UBERON:0003528!3.71e-15!29;UBERON:0001893!3.71e-15!29;UBERON:0003080!1.82e-13!40;UBERON:0003056!2.06e-13!49;UBERON:0002780!9.68e-13!39;UBERON:0001890!9.68e-13!39;UBERON:0006240!9.68e-13!39;UBERON:0000956!2.20e-09!21;UBERON:0001869!2.20e-09!21;UBERON:0000203!2.20e-09!21;UBERON:0002021!2.19e-08!10;UBERON:0000411!2.19e-08!10;UBERON:0001950!2.19e-08!10;UBERON:0007811!4.07e-08!86;UBERON:0002619!4.34e-08!17;UBERON:0002420!2.23e-07!8;UBERON:0007245!2.23e-07!8;UBERON:0010009!2.23e-07!8;UBERON:0010011!2.23e-07!8;UBERON:0000454!2.23e-07!8;UBERON:0002240!9.89e-07!6;UBERON:0005174!9.89e-07!6;UBERON:0001137!9.89e-07!6
|ontology_enrichment_uberon=UBERON:0000073!1.29e-26!75;UBERON:0001016!1.29e-26!75;UBERON:0001017!9.37e-26!73;UBERON:0005743!9.37e-26!73;UBERON:0004121!1.91e-24!102;UBERON:0000924!1.91e-24!102;UBERON:0006601!1.91e-24!102;UBERON:0002020!1.29e-19!34;UBERON:0002346!2.62e-18!71;UBERON:0003075!2.62e-18!71;UBERON:0007284!2.62e-18!71;UBERON:0001049!2.88e-18!52;UBERON:0005068!2.88e-18!52;UBERON:0006241!2.88e-18!52;UBERON:0007135!2.88e-18!52;UBERON:0000955!1.97e-16!50;UBERON:0006238!1.97e-16!50;UBERON:0000033!3.79e-16!63;UBERON:0002616!9.75e-16!49;UBERON:0002791!3.71e-15!29;UBERON:0003528!3.71e-15!29;UBERON:0001893!3.71e-15!29;UBERON:0003080!1.82e-13!40;UBERON:0003056!2.06e-13!49;UBERON:0002780!9.68e-13!39;UBERON:0001890!9.68e-13!39;UBERON:0006240!9.68e-13!39;UBERON:0000956!2.20e-09!21;UBERON:0001869!2.20e-09!21;UBERON:0000203!2.20e-09!21;UBERON:0002021!2.19e-08!10;UBERON:0000411!2.19e-08!10;UBERON:0001950!2.19e-08!10;UBERON:0007811!4.07e-08!86;UBERON:0002619!4.34e-08!17;UBERON:0002420!2.23e-07!8;UBERON:0007245!2.23e-07!8;UBERON:0010009!2.23e-07!8;UBERON:0010011!2.23e-07!8;UBERON:0000454!2.23e-07!8;UBERON:0002240!9.89e-07!6;UBERON:0005174!9.89e-07!6;UBERON:0001137!9.89e-07!6
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.12e-35,73;UBERON:0001016,1.12e-33,75;UBERON:0000073,2.68e-27,54;UBERON:0004121,1.42e-26,95;UBERON:0000924,1.42e-26,95;UBERON:0006601,1.42e-26,95;UBERON:0002020,2.04e-26,34;UBERON:0001049,1.18e-24,52;UBERON:0005068,1.18e-24,52;UBERON:0006241,1.18e-24,52;UBERON:0007135,1.18e-24,52;UBERON:0002346,2.08e-22,64;UBERON:0003075,2.08e-22,64;UBERON:0007284,2.08e-22,64;UBERON:0010371,1.33e-19,73;UBERON:0003528,3.99e-19,29;UBERON:0002791,3.99e-19,29;UBERON:0001893,3.99e-19,29;UBERON:0000955,3.99e-18,47;UBERON:0006238,3.99e-18,47;UBERON:0002616,4.54e-17,46;UBERON:0003080,5.94e-17,40;UBERON:0002780,8.38e-16,39;UBERON:0001890,8.38e-16,39;UBERON:0006240,8.38e-16,39;UBERON:0003056,8.80e-14,49;UBERON:0010314,1.77e-13,92;UBERON:0002420,9.45e-12,8;UBERON:0007245,9.45e-12,8;UBERON:0010009,9.45e-12,8;UBERON:0010011,9.45e-12,8;UBERON:0000454,9.45e-12,8;UBERON:0002021,1.00e-11,10;UBERON:0000411,1.00e-11,10;UBERON:0001950,1.00e-11,10;UBERON:0002619,4.52e-11,17;UBERON:0002240,1.26e-10,6;UBERON:0005174,1.26e-10,6;UBERON:0001137,1.26e-10,6;UBERON:0000956,6.01e-10,21;UBERON:0001869,6.01e-10,21;UBERON:0000203,6.01e-10,21;UBERON:0001948,2.61e-09,5;UBERON:0002315,2.61e-09,5;UBERON:0003076,2.05e-08,12;UBERON:0003057,2.05e-08,12;UBERON:0000369,4.89e-08,5;UBERON:0002435,4.89e-08,5;UBERON:0000204,4.89e-08,5;UBERON:0010082,4.89e-08,5
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64169629547276,4.7609188134483,5.70448263155561,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0.420649922702764,3.99911378165325,4.19650227808066,0.979926393719632,1.34183659425531,0,6.60695285996332,3.44755812830007,3.84016333140609,2.76961204233407,4.57438218012048,2.08365348222704,1.67509799400829,4.50210088025344,3.51435969886663,9.1334861496837,10.5355043791336,5.77838282058432,0.908714319998209,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0.628340120440365,0,0,0,0,3.89455662452539,5.03250663100489,3.14135880282161,2.9550134432687,4.34716277461562,3.1168206683934,3.89379031362618,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.340182495756639,1.5373646434182,0.187403449119458,0.776110112217047,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,5.04695876553905,3.60166143327496,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,4.65596710964597,4.45404409050372,0,0.504941854408746,1.57754109708128,1.95219372148319,0.430846795465598,2.62865677747807,1.78238939265915,1.13230612315533,0.809621403349789,1.16902343164525,0.790575555893047,3.21321316421807,0,0,0,0.824850614862677,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0.608929898229199,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0.214368379079066,0,9.60078132449013,5.06357760157895,7.44764167471216,3.09335728218638,3.42541259885321,3.7769694869485,2.70009000092722,1.35096360967266,0.453142408984205,2.07104124700728,0.103787347584177,0.399024873401031,0.512200817262403,0.972426868273176,1.67690530102386,1.2869045591501,0.888986911206461,1.44224540067226,1.92551525755089,0.505394423527595,0.760437899670719,1.69763707247469,0.842773567228942,0.576226371643824,0.574354689556133,0.476293691283074,1.15884325944855,0.578727661391115,0.824171801606613,0.883193520806384,2.40008476669791,0.70990322463735,0.476872379894642,1.88950341622027,0.941093804153306,1.35383372626682,0.914639864363863,0,0.814824683075171,1.12228454331548,0.711810108745045,1.18205378850676,0.409231043169689,0.77468420592983,0.578719832943424,2.24829520144151,0.701794825336225,0.644613162144895,0.765153328275374,1.10295709559758,1.39120701372253
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64169629547276,4.7609188134483,5.70448263155561,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0.420649922702764,3.99911378165325,4.19650227808066,0.979926393719632,1.34183659425531,0,6.60695285996332,3.44755812830007,3.84016333140609,2.76961204233407,4.57438218012048,2.08365348222704,1.67509799400829,4.50210088025344,3.51435969886663,9.1334861496837,10.5355043791336,5.77838282058432,0.908714319998209,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0.628340120440365,0,0,0,0,3.89455662452539,5.03250663100489,3.14135880282161,2.9550134432687,4.34716277461562,3.1168206683934,3.89379031362618,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.340182495756639,1.5373646434182,0.187403449119458,0.776110112217047,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,5.04695876553905,3.60166143327496,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,4.65596710964597,4.45404409050372,0,0.504941854408746,1.57754109708128,1.95219372148319,0.430846795465598,2.62865677747807,1.78238939265915,1.13230612315533,0.809621403349789,1.16902343164525,0.790575555893047,3.21321316421807,0,0,0,0.824850614862677,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0.608929898229199,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0.214368379079066,0,9.60078132449013,5.06357760157895,7.44764167471216,3.09335728218638,3.42541259885321,3.7769694869485,2.70009000092722,1.35096360967266,0.453142408984205,2.07104124700728,0.103787347584177,0.399024873401031,0.512200817262403,0.972426868273176,1.67690530102386,1.2869045591501,0.888986911206461,1.44224540067226,1.92551525755089,0.505394423527595,0.760437899670719,1.69763707247469,0.842773567228942,0.576226371643824,0.574354689556133,0.476293691283074,1.15884325944855,0.578727661391115,0.824171801606613,0.883193520806384,2.40008476669791,0.70990322463735,0.476872379894642,1.88950341622027,0.941093804153306,1.35383372626682,0.914639864363863,0,0.814824683075171,1.12228454331548,0.711810108745045,1.18205378850676,0.409231043169689,0.77468420592983,0.578719832943424,2.24829520144151,0.701794825336225,0.644613162144895,0.765153328275374,1.10295709559758,1.39120701372253
|short_description=p9@Shroom2
|short_description=p9@Shroom2
}}
}}

Revision as of 12:23, 14 November 2012

Short description:p9@Shroom2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Shroom2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000141677_5end
EntrezGene:Shroom2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Shroom2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron9.02e-2233
neuronal stem cell9.02e-2233
neuroblast9.02e-2233
electrically signaling cell9.02e-2233
CNS neuron (sensu Vertebrata)1.56e-1923
neuroblast (sensu Vertebrata)1.56e-1923
electrically responsive cell2.44e-1739
electrically active cell2.44e-1739
ectodermal cell6.79e-1644
neurectodermal cell6.79e-1644
neural cell4.38e-1543
embryonic cell1.68e-0770

Uber anatomy
Ontology termp-valuen
central nervous system6.12e-3573
nervous system1.12e-3375
regional part of nervous system2.68e-2754
ectoderm-derived structure1.42e-2695
ectoderm1.42e-2695
presumptive ectoderm1.42e-2695
gray matter2.04e-2634
neural tube1.18e-2452
neural rod1.18e-2452
future spinal cord1.18e-2452
neural keel1.18e-2452
neurectoderm2.08e-2264
neural plate2.08e-2264
presumptive neural plate2.08e-2264
ecto-epithelium1.33e-1973
brain grey matter3.99e-1929
regional part of telencephalon3.99e-1929
telencephalon3.99e-1929
brain3.99e-1847
future brain3.99e-1847
regional part of brain4.54e-1746
anterior neural tube5.94e-1740
regional part of forebrain8.38e-1639
forebrain8.38e-1639
future forebrain8.38e-1639
pre-chordal neural plate8.80e-1449
structure with developmental contribution from neural crest1.77e-1392
basal ganglion9.45e-128
nuclear complex of neuraxis9.45e-128
aggregate regional part of brain9.45e-128
collection of basal ganglia9.45e-128
cerebral subcortex9.45e-128
occipital lobe1.00e-1110
visual cortex1.00e-1110
neocortex1.00e-1110
regional part of cerebral cortex4.52e-1117
spinal cord1.26e-106
dorsal region element1.26e-106
dorsum1.26e-106
cerebral cortex6.01e-1021
cerebral hemisphere6.01e-1021
pallium6.01e-1021
regional part of spinal cord2.61e-095
gray matter of spinal cord2.61e-095
posterior neural tube2.05e-0812
chordal neural plate2.05e-0812
corpus striatum4.89e-085
striatum4.89e-085
ventral part of telencephalon4.89e-085
future corpus striatum4.89e-085







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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