FFCP PHASE1:Mm9::chr3:138189402..138189422,+: Difference between revisions
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|id=chr3:138189402..138189422,+ | |id=chr3:138189402..138189422,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.76e-07!9;CL:0002251!3.76e-07!9 | |ontology_enrichment_celltype=CL:0002563!3.76e-07!9;CL:0002251!3.76e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.07e-14,6;CL:0000677,2.07e-14,6;CL:0000584,2.07e-14,6;CL:0002563,2.31e-12,9;CL:0002251,2.31e-12,9;CL:0000075,3.07e-12,7;CL:0000066,1.74e-07,25;CL:0000682,4.04e-07,3;CL:0002076,5.66e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.56e-12!43;UBERON:0000344!1.87e-11!15;UBERON:0001242!3.86e-10!13;UBERON:0000060!3.86e-10!13;UBERON:0001262!3.86e-10!13;UBERON:0004786!3.86e-10!13;UBERON:0005409!1.10e-09!59;UBERON:0004923!1.14e-07!24;UBERON:0003350!3.76e-07!9;UBERON:0004808!3.76e-07!9;UBERON:0001277!3.76e-07!9 | |ontology_enrichment_uberon=UBERON:0000160!1.56e-12!43;UBERON:0000344!1.87e-11!15;UBERON:0001242!3.86e-10!13;UBERON:0000060!3.86e-10!13;UBERON:0001262!3.86e-10!13;UBERON:0004786!3.86e-10!13;UBERON:0005409!1.10e-09!59;UBERON:0004923!1.14e-07!24;UBERON:0003350!3.76e-07!9;UBERON:0004808!3.76e-07!9;UBERON:0001277!3.76e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.71e-42,31;UBERON:0005409,1.13e-25,47;UBERON:0000344,1.74e-24,15;UBERON:0001242,1.07e-20,13;UBERON:0001262,1.07e-20,13;UBERON:0004786,1.07e-20,13;UBERON:0004923,2.28e-16,24;UBERON:0003350,2.31e-12,9;UBERON:0004808,2.31e-12,9;UBERON:0001277,2.31e-12,9;UBERON:0002108,4.48e-10,4;UBERON:0000485,6.54e-10,11;UBERON:0004119,3.76e-09,118;UBERON:0000925,3.76e-09,118;UBERON:0006595,3.76e-09,118;UBERON:0001007,1.48e-08,116;UBERON:0001555,1.48e-08,116;UBERON:0007026,1.48e-08,116;UBERON:0000331,3.86e-08,3;UBERON:0002116,3.86e-08,3;UBERON:0001204,3.86e-08,3;UBERON:0001168,3.86e-08,3;UBERON:0004921,4.02e-07,114 | |||
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|phase1_expression=0,5.23463111459042,4.09499315450582,5.74682001482977,3.50627010962443,1.84667199103079,1.16806320297763,0,0.422366166455,0.234064526321993,0,0.319088635981346,0,0,0,0,0,0.157731082679119,0,0,7.22867966284093,0,0,1.75991665072747,1.37645568640302,1.14846392823004,1.29228598847722,3.01659725760245,2.09025761402011,2.77233142735924,2.43903561720835,0.635030673459631,0.61506478758457,0,1.44425809875637,0.664938581433969,0.408338712524738,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,0.377690453926732,0.506884656097573,0.550640256485045,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21161909333094,0.604572480854284,0.579728977403356,0,0.679971333707751,0,0,0,0.983110940922263,0.340860645156116,0.259786004602869,0.35333957451034,0,0,0,0,0,0.253359865475099,0,1.25602267690966,0.258937883647172,0.445326417194474,0.346970653532272,0,0.461230994512117,0.452167921657868,0.23517741427141,0.376999773989026,0.988779870937496,0.144599356919912,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0,0,1.53274233125155,0.479260498023681,0.599902730993408,0.635351135365324,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0.758168275301024,0,0,0,0.360124259610698,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.61734640922383,0,0.702213187313235,0,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,1.98251269790279,4.7601101999438,0,0,0.38660238396628,1.21010114774006,2.00140239460383,1.33157938278791,1.89811624617805,2.14108641141214,1.00534083520108,1.79060824837036,1.55971269695296,0.898819408654221,2.37751854862164,1.39398891278057,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.379419222745544,0.442830443938806,0.627994911365499,0.370191491765402,0.592905254174298,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0.505157755894224,0.896987067609561,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0.54390568381871,0,0,0.160550589987792,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,1.29214146584111,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0.304464949114599,0.704015124191131,1.27099242518292,0,0.8244312647074,0.322928853391811,0.422190474497091,0.716234064018819,1.64140899745061,1.7488850197791,0,0,0,0,0,0,0,1.5298058699447,0.839708713941948,1.52019971184866,0.954670618015114,0,0,0.432021363287205,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.523511883968059,0.777689839750757,0.621339313086926,34.9489621984198,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,8.92893019399383,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.680191150845634,0,0.358855426437903,0,0.386379188064381,0.375364950902364,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0.385813221962283,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0 | ||
|short_description=p3@Mir1956 | |short_description=p3@Mir1956 | ||
}} | }} |
Revision as of 11:25, 14 November 2012
Short description: | p3@Mir1956 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mir1956_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 17bp_to_ENSMUST00000157748, NR_035481, uc012cym.1_5end |
EntrezGene: | Mir1956 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.07e-14 | 6 |
gut absorptive cell | 2.07e-14 | 6 |
enterocyte | 2.07e-14 | 6 |
intestinal epithelial cell | 2.31e-12 | 9 |
epithelial cell of alimentary canal | 2.31e-12 | 9 |
columnar/cuboidal epithelial cell | 3.07e-12 | 7 |
epithelial cell | 1.74e-07 | 25 |
M cell of gut | 4.04e-07 | 3 |
endo-epithelial cell | 5.66e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.71e-42 | 31 |
gastrointestinal system | 1.13e-25 | 47 |
mucosa | 1.74e-24 | 15 |
intestinal mucosa | 1.07e-20 | 13 |
wall of intestine | 1.07e-20 | 13 |
gastrointestinal system mucosa | 1.07e-20 | 13 |
organ component layer | 2.28e-16 | 24 |
epithelium of mucosa | 2.31e-12 | 9 |
gastrointestinal system epithelium | 2.31e-12 | 9 |
intestinal epithelium | 2.31e-12 | 9 |
small intestine | 4.48e-10 | 4 |
simple columnar epithelium | 6.54e-10 | 11 |
endoderm-derived structure | 3.76e-09 | 118 |
endoderm | 3.76e-09 | 118 |
presumptive endoderm | 3.76e-09 | 118 |
digestive system | 1.48e-08 | 116 |
digestive tract | 1.48e-08 | 116 |
primitive gut | 1.48e-08 | 116 |
ileal mucosa | 3.86e-08 | 3 |
ileum | 3.86e-08 | 3 |
mucosa of small intestine | 3.86e-08 | 3 |
wall of small intestine | 3.86e-08 | 3 |
subdivision of digestive tract | 4.02e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.