FFCP PHASE1:Mm9::chr9:123559838..123559852,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr9:123559838..123559852,- | |id=chr9:123559838..123559852,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.97e-15!59;UBERON:0000160!1.07e-12!43;UBERON:0004923!1.21e-09!24;UBERON:0000344!2.65e-08!15;UBERON:0001007!7.84e-08!128;UBERON:0001555!7.84e-08!128;UBERON:0007026!7.84e-08!128;UBERON:0004119!1.63e-07!130;UBERON:0000925!1.63e-07!130;UBERON:0006595!1.63e-07!130;UBERON:0004921!8.57e-07!126;UBERON:0004185!8.57e-07!126 | |ontology_enrichment_uberon=UBERON:0005409!1.97e-15!59;UBERON:0000160!1.07e-12!43;UBERON:0004923!1.21e-09!24;UBERON:0000344!2.65e-08!15;UBERON:0001007!7.84e-08!128;UBERON:0001555!7.84e-08!128;UBERON:0007026!7.84e-08!128;UBERON:0004119!1.63e-07!130;UBERON:0000925!1.63e-07!130;UBERON:0006595!1.63e-07!130;UBERON:0004921!8.57e-07!126;UBERON:0004185!8.57e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.35e-18,47;UBERON:0004923,6.82e-16,24;UBERON:0000160,9.41e-16,31;UBERON:0001962,3.01e-13,2;UBERON:0001961,3.01e-13,2;UBERON:0001744,3.01e-13,2;UBERON:0000344,2.55e-10,15;UBERON:0002106,4.75e-10,6;UBERON:0004457,4.75e-10,6;UBERON:0000042,4.75e-10,6;UBERON:0004854,4.75e-10,6;UBERON:0009034,4.75e-10,6;UBERON:0002095,4.75e-10,6;UBERON:0004782,4.75e-10,6;UBERON:0003281,4.75e-10,6;UBERON:0009664,4.75e-10,6;UBERON:0002296,4.75e-10,6;UBERON:0005602,4.75e-10,6;UBERON:0001179,4.75e-10,6;UBERON:0006293,4.75e-10,6;UBERON:0001007,2.68e-09,116;UBERON:0001555,2.68e-09,116;UBERON:0007026,2.68e-09,116;UBERON:0002465,3.86e-09,3;UBERON:0004119,4.08e-09,118;UBERON:0000925,4.08e-09,118;UBERON:0006595,4.08e-09,118;UBERON:0003199,2.37e-07,1 | |||
|phase1_expression=0,0,0.909998478779072,1.51232105653415,1.00179145989269,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,0.255129870453209,0,0,1.75991665072747,1.37645568640302,0,0.430761996159075,0.215471232685889,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0,0.766371165625774,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0.486723789203273,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,3.63460661282178,1.32225283331772,0,0,0.128867461322093,0.201683524623343,0.889512175379481,0.190225626112559,1.89811624617805,0.658795818896044,0.502670417600539,0.397912944082302,0.38992817423824,2.69645822596266,4.10662294761919,5.77509692437665,0,0,0,0,0,0,0.0632365371242573,0.442830443938806,0.156998727841375,0,0,0,0,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0,0.486405680325106,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0.0603129249281559,0,0,2.91480836629851,0,0.170870880797853,0,0.185194527369712,2.63715839806567,1.50363650493128,2.0590035588587,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0.909998478779072,1.51232105653415,1.00179145989269,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,0.255129870453209,0,0,1.75991665072747,1.37645568640302,0,0.430761996159075,0.215471232685889,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0,0.766371165625774,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0.486723789203273,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,3.63460661282178,1.32225283331772,0,0,0.128867461322093,0.201683524623343,0.889512175379481,0.190225626112559,1.89811624617805,0.658795818896044,0.502670417600539,0.397912944082302,0.38992817423824,2.69645822596266,4.10662294761919,5.77509692437665,0,0,0,0,0,0,0.0632365371242573,0.442830443938806,0.156998727841375,0,0,0,0,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0,0.486405680325106,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0.0603129249281559,0,0,2.91480836629851,0,0.170870880797853,0,0.185194527369712,2.63715839806567,1.50363650493128,2.0590035588587,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr9:123559838..123559852,- | |short_description=p@chr9:123559838..123559852,- | ||
}} | }} |
Revision as of 09:15, 14 November 2012
Short description: | p@chr9:123559838..123559852, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:123559838..123559852, - |
Coexpression cluster: | MCL_coexpression_mm9:934 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.35e-18 | 47 |
organ component layer | 6.82e-16 | 24 |
intestine | 9.41e-16 | 31 |
gut-associated lymphoid tissue | 3.01e-13 | 2 |
mucosa-associated lymphoid tissue | 3.01e-13 | 2 |
lymphoid tissue | 3.01e-13 | 2 |
mucosa | 2.55e-10 | 15 |
spleen | 4.75e-10 | 6 |
cavity lining | 4.75e-10 | 6 |
serous membrane | 4.75e-10 | 6 |
gastrointestinal system mesentery | 4.75e-10 | 6 |
stomach region | 4.75e-10 | 6 |
mesentery | 4.75e-10 | 6 |
gastrointestinal system serosa | 4.75e-10 | 6 |
mesentery of stomach | 4.75e-10 | 6 |
gut mesentery | 4.75e-10 | 6 |
dorsal mesentery | 4.75e-10 | 6 |
dorsal mesogastrium | 4.75e-10 | 6 |
peritoneal cavity | 4.75e-10 | 6 |
spleen primordium | 4.75e-10 | 6 |
digestive system | 2.68e-09 | 116 |
digestive tract | 2.68e-09 | 116 |
primitive gut | 2.68e-09 | 116 |
lymphoid system | 3.86e-09 | 3 |
endoderm-derived structure | 4.08e-09 | 118 |
endoderm | 4.08e-09 | 118 |
presumptive endoderm | 4.08e-09 | 118 |
egg chamber | 2.37e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.