FFCP PHASE1:Mm9::chr7:50890088..50890111,+: Difference between revisions
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|id=chr7:50890088..50890111,+ | |id=chr7:50890088..50890111,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.59e-09!9;CL:0002251!1.59e-09!9;CL:0000239!1.70e-07!6;CL:0000677!1.70e-07!6;CL:0000212!1.70e-07!6;CL:0000584!1.70e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.59e-09!9;CL:0002251!1.59e-09!9;CL:0000239!1.70e-07!6;CL:0000677!1.70e-07!6;CL:0000212!1.70e-07!6;CL:0000584!1.70e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.30e-13,9;CL:0002251,3.30e-13,9;CL:0000239,3.02e-10,6;CL:0000677,3.02e-10,6;CL:0000584,3.02e-10,6;CL:0000075,1.24e-08,7;CL:0002076,4.01e-07,15;CL:0000066,5.19e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.25e-20!43;UBERON:0005409!4.28e-18!59;UBERON:0000344!6.57e-16!15;UBERON:0001242!1.28e-13!13;UBERON:0000060!1.28e-13!13;UBERON:0001262!1.28e-13!13;UBERON:0004786!1.28e-13!13;UBERON:0004923!6.89e-12!24;UBERON:0004119!9.59e-10!130;UBERON:0000925!9.59e-10!130;UBERON:0006595!9.59e-10!130;UBERON:0003350!1.59e-09!9;UBERON:0004808!1.59e-09!9;UBERON:0001277!1.59e-09!9;UBERON:0001007!8.84e-09!128;UBERON:0001555!8.84e-09!128;UBERON:0007026!8.84e-09!128;UBERON:0004921!1.13e-07!126;UBERON:0004185!1.13e-07!126;UBERON:0000485!2.63e-07!11 | |ontology_enrichment_uberon=UBERON:0000160!2.25e-20!43;UBERON:0005409!4.28e-18!59;UBERON:0000344!6.57e-16!15;UBERON:0001242!1.28e-13!13;UBERON:0000060!1.28e-13!13;UBERON:0001262!1.28e-13!13;UBERON:0004786!1.28e-13!13;UBERON:0004923!6.89e-12!24;UBERON:0004119!9.59e-10!130;UBERON:0000925!9.59e-10!130;UBERON:0006595!9.59e-10!130;UBERON:0003350!1.59e-09!9;UBERON:0004808!1.59e-09!9;UBERON:0001277!1.59e-09!9;UBERON:0001007!8.84e-09!128;UBERON:0001555!8.84e-09!128;UBERON:0007026!8.84e-09!128;UBERON:0004921!1.13e-07!126;UBERON:0004185!1.13e-07!126;UBERON:0000485!2.63e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.22e-39,31;UBERON:0005409,2.05e-30,47;UBERON:0000344,1.49e-22,15;UBERON:0001242,3.39e-19,13;UBERON:0001262,3.39e-19,13;UBERON:0004786,3.39e-19,13;UBERON:0004923,3.61e-16,24;UBERON:0003350,3.30e-13,9;UBERON:0004808,3.30e-13,9;UBERON:0001277,3.30e-13,9;UBERON:0000485,1.97e-10,11;UBERON:0004119,9.97e-10,118;UBERON:0000925,9.97e-10,118;UBERON:0006595,9.97e-10,118;UBERON:0001007,1.55e-08,116;UBERON:0001555,1.55e-08,116;UBERON:0007026,1.55e-08,116;UBERON:0002108,2.91e-07,4;UBERON:0004921,3.43e-07,114 | |||
|phase1_expression=0,241.142006678799,239.329599918896,79.2456233623895,59.105696133669,43.1449728813557,55.5998084617351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,256.147868892244,238.815061590924,187.199620301497,167.56641650588,144.15025466686,119.144683999146,33.7720373878307,85.144516091637,0,0,0,2.02196133825892,2.32728503501889,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.70755404816862,0,0,0,0,0,0,0,0,0,0,13.5878816865681,0,0,0.173485326766136,0,0,0,0,0.376999773989026,0.988779870937496,0,0,0,0,0,7.45567044872489,0,0,107.547420242817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,681.323530512591,240.121114530498,0,0.928946687441754,1.9330119198314,12.1010114774006,13.1203045868473,24.3488801424076,138.562485970997,86.4669512301057,62.8338022000674,64.8598098854152,59.4640465713316,127.632356028899,112.391785934841,110.523406656174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.604647113929502,0,0,0,25.5844010236539,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39744928546534,5.93129798418696,0,0,0,0,0,0.164140899745061,103.475697003597,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29606408986162,0.836353184057875,2.18362563746178,0.404593039154462,1.81837602595739,0,5.96228877142247,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.129920822977795,0,0.198681354781265,0.480781798079875,0.295379054349154,0.504832249740738,0.15241361331,0.403304740547362,0.682205165178267,0.481059208201647,0.467507608726276,0,0,0,0,0,6.38120416534019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,1.33348036680969,1.03017528619447,0.64183841918363,0.505394423527595,1.77435509923168,1.13175804831646,1.03005658216871,0.704276676453562,0.918967503289812,0.476293691283074,0.579421629724277,0.964546102318525,1.23625770240992,0.588795680537589,1.02860775715625,1.95223386775271,1.43061713968393,1.0174249164263,0.941093804153306,1.01537529470012,0.365855945745545,1.05227884575137,0.679020569229309,1.12228454331548,0.355905054372522,0.886540341380071,0.409231043169689,1.39443157067369,1.15743966588685,0,1.63752125911786,5.58664740525576,0,0.220591419119515,0 | |phase1_expression=0,241.142006678799,239.329599918896,79.2456233623895,59.105696133669,43.1449728813557,55.5998084617351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,256.147868892244,238.815061590924,187.199620301497,167.56641650588,144.15025466686,119.144683999146,33.7720373878307,85.144516091637,0,0,0,2.02196133825892,2.32728503501889,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.70755404816862,0,0,0,0,0,0,0,0,0,0,13.5878816865681,0,0,0.173485326766136,0,0,0,0,0.376999773989026,0.988779870937496,0,0,0,0,0,7.45567044872489,0,0,107.547420242817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,681.323530512591,240.121114530498,0,0.928946687441754,1.9330119198314,12.1010114774006,13.1203045868473,24.3488801424076,138.562485970997,86.4669512301057,62.8338022000674,64.8598098854152,59.4640465713316,127.632356028899,112.391785934841,110.523406656174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.604647113929502,0,0,0,25.5844010236539,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39744928546534,5.93129798418696,0,0,0,0,0,0.164140899745061,103.475697003597,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29606408986162,0.836353184057875,2.18362563746178,0.404593039154462,1.81837602595739,0,5.96228877142247,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.129920822977795,0,0.198681354781265,0.480781798079875,0.295379054349154,0.504832249740738,0.15241361331,0.403304740547362,0.682205165178267,0.481059208201647,0.467507608726276,0,0,0,0,0,6.38120416534019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,1.33348036680969,1.03017528619447,0.64183841918363,0.505394423527595,1.77435509923168,1.13175804831646,1.03005658216871,0.704276676453562,0.918967503289812,0.476293691283074,0.579421629724277,0.964546102318525,1.23625770240992,0.588795680537589,1.02860775715625,1.95223386775271,1.43061713968393,1.0174249164263,0.941093804153306,1.01537529470012,0.365855945745545,1.05227884575137,0.679020569229309,1.12228454331548,0.355905054372522,0.886540341380071,0.409231043169689,1.39443157067369,1.15743966588685,0,1.63752125911786,5.58664740525576,0,0.220591419119515,0 | ||
|short_description=p1@Ceacam18 | |short_description=p1@Ceacam18 | ||
}} | }} |
Revision as of 06:04, 14 November 2012
Short description: | p1@Ceacam18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ceacam18_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000032663, NM_028236, uc009gnf.1_5end |
EntrezGene: | Ceacam18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.30e-13 | 9 |
epithelial cell of alimentary canal | 3.30e-13 | 9 |
brush border epithelial cell | 3.02e-10 | 6 |
gut absorptive cell | 3.02e-10 | 6 |
enterocyte | 3.02e-10 | 6 |
columnar/cuboidal epithelial cell | 1.24e-08 | 7 |
endo-epithelial cell | 4.01e-07 | 15 |
epithelial cell | 5.19e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.22e-39 | 31 |
gastrointestinal system | 2.05e-30 | 47 |
mucosa | 1.49e-22 | 15 |
intestinal mucosa | 3.39e-19 | 13 |
wall of intestine | 3.39e-19 | 13 |
gastrointestinal system mucosa | 3.39e-19 | 13 |
organ component layer | 3.61e-16 | 24 |
epithelium of mucosa | 3.30e-13 | 9 |
gastrointestinal system epithelium | 3.30e-13 | 9 |
intestinal epithelium | 3.30e-13 | 9 |
simple columnar epithelium | 1.97e-10 | 11 |
endoderm-derived structure | 9.97e-10 | 118 |
endoderm | 9.97e-10 | 118 |
presumptive endoderm | 9.97e-10 | 118 |
digestive system | 1.55e-08 | 116 |
digestive tract | 1.55e-08 | 116 |
primitive gut | 1.55e-08 | 116 |
small intestine | 2.91e-07 | 4 |
subdivision of digestive tract | 3.43e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.