FFCP PHASE1:Mm9::chr5:66253889..66253892,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr5:66253889..66253892,+ | |id=chr5:66253889..66253892,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.52e-36!23;UBERON:0000974!2.52e-36!23;UBERON:0004807!2.52e-36!23;UBERON:0005058!2.52e-36!23;UBERON:0003351!2.52e-36!23;UBERON:0009113!2.52e-36!23;UBERON:0003295!2.52e-36!23;UBERON:0009722!2.52e-36!23;UBERON:0005562!2.52e-36!23;UBERON:0007690!2.52e-36!23;UBERON:0006562!1.10e-34!24;UBERON:0003408!1.10e-34!24;UBERON:0001557!1.10e-34!24;UBERON:0001042!1.10e-34!24;UBERON:0008814!1.10e-34!24;UBERON:0009145!1.10e-34!24;UBERON:0004177!8.78e-32!29;UBERON:0000072!1.73e-30!27;UBERON:0002193!1.38e-25!48;UBERON:0002390!1.28e-24!45;UBERON:0003061!1.28e-24!45;UBERON:0000063!8.26e-23!35;UBERON:0000065!5.16e-19!41;UBERON:0001004!1.74e-18!42;UBERON:0005057!1.19e-16!51;UBERON:0002405!2.34e-16!70;UBERON:0003081!1.83e-15!88;UBERON:0002368!1.21e-13!60;UBERON:0003929!2.26e-13!55;UBERON:0002530!2.44e-12!65;UBERON:0000949!8.15e-11!72;UBERON:0000490!1.28e-10!66;UBERON:0005911!5.08e-10!69;UBERON:0000064!4.93e-08!99;UBERON:0003104!6.55e-08!131;UBERON:0009142!6.55e-08!131;UBERON:0001041!9.56e-08!92;UBERON:0007811!2.02e-07!86;UBERON:0000077!3.55e-07!97 | |ontology_enrichment_uberon=UBERON:0002370!2.52e-36!23;UBERON:0000974!2.52e-36!23;UBERON:0004807!2.52e-36!23;UBERON:0005058!2.52e-36!23;UBERON:0003351!2.52e-36!23;UBERON:0009113!2.52e-36!23;UBERON:0003295!2.52e-36!23;UBERON:0009722!2.52e-36!23;UBERON:0005562!2.52e-36!23;UBERON:0007690!2.52e-36!23;UBERON:0006562!1.10e-34!24;UBERON:0003408!1.10e-34!24;UBERON:0001557!1.10e-34!24;UBERON:0001042!1.10e-34!24;UBERON:0008814!1.10e-34!24;UBERON:0009145!1.10e-34!24;UBERON:0004177!8.78e-32!29;UBERON:0000072!1.73e-30!27;UBERON:0002193!1.38e-25!48;UBERON:0002390!1.28e-24!45;UBERON:0003061!1.28e-24!45;UBERON:0000063!8.26e-23!35;UBERON:0000065!5.16e-19!41;UBERON:0001004!1.74e-18!42;UBERON:0005057!1.19e-16!51;UBERON:0002405!2.34e-16!70;UBERON:0003081!1.83e-15!88;UBERON:0002368!1.21e-13!60;UBERON:0003929!2.26e-13!55;UBERON:0002530!2.44e-12!65;UBERON:0000949!8.15e-11!72;UBERON:0000490!1.28e-10!66;UBERON:0005911!5.08e-10!69;UBERON:0000064!4.93e-08!99;UBERON:0003104!6.55e-08!131;UBERON:0009142!6.55e-08!131;UBERON:0001041!9.56e-08!92;UBERON:0007811!2.02e-07!86;UBERON:0000077!3.55e-07!97 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.24e-12,23;UBERON:0000974,2.24e-12,23;UBERON:0004807,2.24e-12,23;UBERON:0005058,2.24e-12,23;UBERON:0003351,2.24e-12,23;UBERON:0009113,2.24e-12,23;UBERON:0003295,2.24e-12,23;UBERON:0009722,2.24e-12,23;UBERON:0005562,2.24e-12,23;UBERON:0007690,2.24e-12,23;UBERON:0006562,6.63e-12,24;UBERON:0003408,6.63e-12,24;UBERON:0001557,6.63e-12,24;UBERON:0001042,6.63e-12,24;UBERON:0008814,6.63e-12,24;UBERON:0009145,6.63e-12,24;UBERON:0000072,1.06e-10,27;UBERON:0004177,4.90e-10,29;UBERON:0005057,4.90e-10,29;UBERON:0000077,1.72e-08,35;UBERON:0007811,2.78e-08,36;UBERON:0000065,2.16e-07,41;UBERON:0001004,3.07e-07,42;UBERON:0000153,4.30e-07,43;UBERON:0002390,8.07e-07,45;UBERON:0003061,8.07e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0.473193248037357,0,0.42438965179803,0,0,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810900861160657,0.821687657318618,1.16928740680016,0.537080087002444,0.198681354781265,1.08175904567972,0.443068581523732,0.908698049533329,1.143102099825,0.504130925684203,0.38983152295901,0.288635524920988,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0.473193248037357,0,0.42438965179803,0,0,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810900861160657,0.821687657318618,1.16928740680016,0.537080087002444,0.198681354781265,1.08175904567972,0.443068581523732,0.908698049533329,1.143102099825,0.504130925684203,0.38983152295901,0.288635524920988,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@Rhoh | |short_description=p12@Rhoh | ||
}} | }} |
Revision as of 05:43, 14 November 2012
Short description: | p12@Rhoh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Rhoh_5end |
Coexpression cluster: | MCL_coexpression_mm9:51 |
Association with transcript: | -247bp_to_uc008xod.1_5end |
EntrezGene: | Rhoh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.24e-12 | 23 |
neck | 2.24e-12 | 23 |
respiratory system epithelium | 2.24e-12 | 23 |
hemolymphoid system gland | 2.24e-12 | 23 |
pharyngeal epithelium | 2.24e-12 | 23 |
thymic region | 2.24e-12 | 23 |
pharyngeal gland | 2.24e-12 | 23 |
entire pharyngeal arch endoderm | 2.24e-12 | 23 |
thymus primordium | 2.24e-12 | 23 |
early pharyngeal endoderm | 2.24e-12 | 23 |
pharynx | 6.63e-12 | 24 |
gland of gut | 6.63e-12 | 24 |
upper respiratory tract | 6.63e-12 | 24 |
chordate pharynx | 6.63e-12 | 24 |
pharyngeal arch system | 6.63e-12 | 24 |
pharyngeal region of foregut | 6.63e-12 | 24 |
segment of respiratory tract | 1.06e-10 | 27 |
hemopoietic organ | 4.90e-10 | 29 |
immune organ | 4.90e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.72e-08 | 35 |
craniocervical region | 2.78e-08 | 36 |
respiratory tract | 2.16e-07 | 41 |
respiratory system | 3.07e-07 | 42 |
anterior region of body | 4.30e-07 | 43 |
hematopoietic system | 8.07e-07 | 45 |
blood island | 8.07e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.