FFCP PHASE1:Mm9::chr6:117857813..117857850,+: Difference between revisions
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|id=chr6:117857813..117857850,+ | |id=chr6:117857813..117857850,+ | ||
|ontology_enrichment_celltype=CL:0000988!6.84e-11!32;CL:0002032!6.84e-11!32;CL:0000037!6.84e-11!32;CL:0000566!6.84e-11!32;CL:0000837!6.84e-11!32;CL:0002320!1.08e-09!46;CL:0000134!1.08e-09!46;CL:0000838!3.78e-09!12;CL:0000063!6.85e-09!66;CL:0000542!6.98e-09!13;CL:0000051!6.98e-09!13;CL:0000084!1.30e-08!11;CL:0000827!1.30e-08!11;CL:0002031!1.59e-07!25;CL:0000791!1.89e-07!9;CL:0000789!1.89e-07!9;CL:0002420!1.89e-07!9;CL:0002419!1.89e-07!9;CL:0000790!1.89e-07!9;CL:0000624!8.90e-07!8;CL:0000219!9.21e-07!54 | |ontology_enrichment_celltype=CL:0000988!6.84e-11!32;CL:0002032!6.84e-11!32;CL:0000037!6.84e-11!32;CL:0000566!6.84e-11!32;CL:0000837!6.84e-11!32;CL:0002320!1.08e-09!46;CL:0000134!1.08e-09!46;CL:0000838!3.78e-09!12;CL:0000063!6.85e-09!66;CL:0000542!6.98e-09!13;CL:0000051!6.98e-09!13;CL:0000084!1.30e-08!11;CL:0000827!1.30e-08!11;CL:0002031!1.59e-07!25;CL:0000791!1.89e-07!9;CL:0000789!1.89e-07!9;CL:0002420!1.89e-07!9;CL:0002419!1.89e-07!9;CL:0000790!1.89e-07!9;CL:0000624!8.90e-07!8;CL:0000219!9.21e-07!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.83e-11,32;CL:0002032,6.83e-11,32;CL:0000037,6.83e-11,32;CL:0000837,6.83e-11,32;CL:0002320,1.07e-09,46;CL:0000134,1.07e-09,46;CL:0000838,3.78e-09,12;CL:0000542,6.97e-09,13;CL:0000051,6.97e-09,13;CL:0000084,1.29e-08,11;CL:0000827,1.29e-08,11;CL:0002031,1.59e-07,25;CL:0000791,1.89e-07,9;CL:0000789,1.89e-07,9;CL:0002420,1.89e-07,9;CL:0002419,1.89e-07,9;CL:0000790,1.89e-07,9;CL:0000624,8.89e-07,8;CL:0000219,9.20e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.92e-20!128;UBERON:0001555!4.92e-20!128;UBERON:0007026!4.92e-20!128;UBERON:0004119!6.35e-20!130;UBERON:0000925!6.35e-20!130;UBERON:0006595!6.35e-20!130;UBERON:0004921!6.06e-19!126;UBERON:0004185!6.06e-19!126;UBERON:0005409!2.06e-15!59;UBERON:0000160!8.77e-12!43;UBERON:0001041!1.97e-10!92;UBERON:0002405!2.89e-10!70;UBERON:0000077!3.38e-10!97;UBERON:0002384!1.08e-09!46;UBERON:0005057!1.86e-08!51;UBERON:0003929!2.55e-08!55;UBERON:0002193!1.95e-07!48 | |ontology_enrichment_uberon=UBERON:0001007!4.92e-20!128;UBERON:0001555!4.92e-20!128;UBERON:0007026!4.92e-20!128;UBERON:0004119!6.35e-20!130;UBERON:0000925!6.35e-20!130;UBERON:0006595!6.35e-20!130;UBERON:0004921!6.06e-19!126;UBERON:0004185!6.06e-19!126;UBERON:0005409!2.06e-15!59;UBERON:0000160!8.77e-12!43;UBERON:0001041!1.97e-10!92;UBERON:0002405!2.89e-10!70;UBERON:0000077!3.38e-10!97;UBERON:0002384!1.08e-09!46;UBERON:0005057!1.86e-08!51;UBERON:0003929!2.55e-08!55;UBERON:0002193!1.95e-07!48 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.25e-15,116;UBERON:0001555,1.25e-15,116;UBERON:0007026,1.25e-15,116;UBERON:0004119,1.59e-15,118;UBERON:0000925,1.59e-15,118;UBERON:0006595,1.59e-15,118;UBERON:0004921,1.16e-14,114;UBERON:0005409,1.53e-11,47;UBERON:0002384,1.07e-09,46;UBERON:0003929,2.54e-08,55;UBERON:0000160,3.67e-08,31;UBERON:0002193,1.95e-07,48;UBERON:0002405,1.95e-07,48;UBERON:0001041,3.41e-07,80 | |||
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| ||
|short_description=p4@Hnrnpf | |short_description=p4@Hnrnpf | ||
}} | }} |
Revision as of 03:44, 14 November 2012
Short description: | p4@Hnrnpf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Hnrnpf_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 0bp_to_ENSMUST00000167657, NM_001166428, NM_001166429, uc012eqz.1, uc012era.1_5end |
EntrezGene: | Hnrnpf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.83e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.83e-11 | 32 |
hematopoietic stem cell | 6.83e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.83e-11 | 32 |
connective tissue cell | 1.07e-09 | 46 |
mesenchymal cell | 1.07e-09 | 46 |
lymphoid lineage restricted progenitor cell | 3.78e-09 | 12 |
lymphocyte | 6.97e-09 | 13 |
common lymphoid progenitor | 6.97e-09 | 13 |
T cell | 1.29e-08 | 11 |
pro-T cell | 1.29e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 1.59e-07 | 25 |
mature alpha-beta T cell | 1.89e-07 | 9 |
alpha-beta T cell | 1.89e-07 | 9 |
immature T cell | 1.89e-07 | 9 |
mature T cell | 1.89e-07 | 9 |
immature alpha-beta T cell | 1.89e-07 | 9 |
CD4-positive, alpha-beta T cell | 8.89e-07 | 8 |
motile cell | 9.20e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
digestive system | 1.25e-15 | 116 |
digestive tract | 1.25e-15 | 116 |
primitive gut | 1.25e-15 | 116 |
endoderm-derived structure | 1.59e-15 | 118 |
endoderm | 1.59e-15 | 118 |
presumptive endoderm | 1.59e-15 | 118 |
subdivision of digestive tract | 1.16e-14 | 114 |
gastrointestinal system | 1.53e-11 | 47 |
connective tissue | 1.07e-09 | 46 |
gut epithelium | 2.54e-08 | 55 |
intestine | 3.67e-08 | 31 |
hemolymphoid system | 1.95e-07 | 48 |
immune system | 1.95e-07 | 48 |
foregut | 3.41e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.