FFCP PHASE1:Mm9::chr19:32298694..32298697,+: Difference between revisions
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|id=chr19:32298694..32298697,+ | |id=chr19:32298694..32298697,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.96e-08!32;CL:0002032!3.96e-08!32;CL:0000037!3.96e-08!32;CL:0000566!3.96e-08!32;CL:0000837!3.96e-08!32;CL:0000049!6.14e-08!19;CL:0000034!7.69e-08!97;CL:0000553!1.35e-07!6;CL:0000556!1.35e-07!6;CL:0002320!2.64e-07!46;CL:0000134!2.64e-07!46 | |ontology_enrichment_celltype=CL:0000988!3.96e-08!32;CL:0002032!3.96e-08!32;CL:0000037!3.96e-08!32;CL:0000566!3.96e-08!32;CL:0000837!3.96e-08!32;CL:0000049!6.14e-08!19;CL:0000034!7.69e-08!97;CL:0000553!1.35e-07!6;CL:0000556!1.35e-07!6;CL:0002320!2.64e-07!46;CL:0000134!2.64e-07!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.04e-11,6;CL:0000556,3.04e-11,6;CL:0000945,1.24e-08,1;CL:0000236,1.24e-08,1;CL:0000826,1.24e-08,1;CL:0000057,1.47e-08,1;CL:0000632,1.47e-08,1;CL:0000355,4.11e-08,9;CL:0000050,1.10e-07,9;CL:0002031,3.81e-07,25 | |||
|ontology_enrichment_disease=DOID:0060100!9.06e-10!3;DOID:4045!9.06e-10!3 | |ontology_enrichment_disease=DOID:0060100!9.06e-10!3;DOID:4045!9.06e-10!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.98e-23,3;DOID:4045,3.98e-23,3;DOID:0050686,6.82e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.67e-08!32;UBERON:0002384!2.64e-07!46 | |ontology_enrichment_uberon=UBERON:0002204!1.67e-08!32;UBERON:0002384!2.64e-07!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.11e-08,9;UBERON:0002036,4.11e-08,9;UBERON:0002385,4.11e-08,9;UBERON:0000486,4.11e-08,9;UBERON:0007503,4.11e-08,9;UBERON:0001015,4.11e-08,9;UBERON:0002329,4.11e-08,9;UBERON:0003082,4.11e-08,9;UBERON:0003059,4.11e-08,9;UBERON:0007282,4.11e-08,9;UBERON:0004290,4.11e-08,9;UBERON:0009618,4.11e-08,9;UBERON:0002204,5.42e-08,32;UBERON:0000383,2.37e-07,10;UBERON:0007524,9.96e-07,11;UBERON:0003077,9.96e-07,11;UBERON:0007285,9.96e-07,11 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,1.19840510951844,0.0874204024189974,0,0.202475267389826,0,1.57731082679119,1.09691546884591,2.12194825899015,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8339233831608,22.6587249911902,4.71171369576418,114.116908678017,59.4249571913848,14.5653105909346,0,0,0,0,0,0,0,0,0,2.85230430298152,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,2.58127163094416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0.11981512450592,0,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0.655453258862952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,1.19840510951844,0.0874204024189974,0,0.202475267389826,0,1.57731082679119,1.09691546884591,2.12194825899015,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8339233831608,22.6587249911902,4.71171369576418,114.116908678017,59.4249571913848,14.5653105909346,0,0,0,0,0,0,0,0,0,2.85230430298152,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,2.58127163094416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0.11981512450592,0,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0.655453258862952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr19:32298694..32298697,+ | |short_description=p@chr19:32298694..32298697,+ | ||
}} | }} |
Revision as of 21:58, 13 November 2012
Short description: | p@chr19:32298694..32298697, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:32298694..32298697, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.04e-11 | 6 |
megakaryocyte | 3.04e-11 | 6 |
lymphocyte of B lineage | 1.24e-08 | 1 |
B cell | 1.24e-08 | 1 |
pro-B cell | 1.24e-08 | 1 |
fibroblast | 1.47e-08 | 1 |
hepatic stellate cell | 1.47e-08 | 1 |
multi-potent skeletal muscle stem cell | 4.11e-08 | 9 |
megakaryocyte-erythroid progenitor cell | 1.10e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 3.81e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.11e-08 | 9 |
striated muscle tissue | 4.11e-08 | 9 |
muscle tissue | 4.11e-08 | 9 |
multilaminar epithelium | 4.11e-08 | 9 |
epithelial vesicle | 4.11e-08 | 9 |
musculature | 4.11e-08 | 9 |
somite | 4.11e-08 | 9 |
myotome | 4.11e-08 | 9 |
presomitic mesoderm | 4.11e-08 | 9 |
presumptive segmental plate | 4.11e-08 | 9 |
dermomyotome | 4.11e-08 | 9 |
trunk paraxial mesoderm | 4.11e-08 | 9 |
musculoskeletal system | 5.42e-08 | 32 |
musculature of body | 2.37e-07 | 10 |
dense mesenchyme tissue | 9.96e-07 | 11 |
paraxial mesoderm | 9.96e-07 | 11 |
presumptive paraxial mesoderm | 9.96e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.98e-23 | 3 |
muscle cancer | 3.98e-23 | 3 |
organ system cancer | 6.82e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.