Personal tools

FFCP PHASE1:Mm9::chr9:43855473..43855505,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr9:43855473..43855505,+
|id=chr9:43855473..43855505,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!2.99e-14!86;UBERON:0000153!2.73e-13!94;UBERON:0002370!1.29e-09!23;UBERON:0000974!1.29e-09!23;UBERON:0004807!1.29e-09!23;UBERON:0005058!1.29e-09!23;UBERON:0003351!1.29e-09!23;UBERON:0009113!1.29e-09!23;UBERON:0003295!1.29e-09!23;UBERON:0009722!1.29e-09!23;UBERON:0005562!1.29e-09!23;UBERON:0007690!1.29e-09!23;UBERON:0006562!7.11e-09!24;UBERON:0003408!7.11e-09!24;UBERON:0001557!7.11e-09!24;UBERON:0001042!7.11e-09!24;UBERON:0008814!7.11e-09!24;UBERON:0009145!7.11e-09!24;UBERON:0002021!8.42e-09!10;UBERON:0000411!8.42e-09!10;UBERON:0001950!8.42e-09!10;UBERON:0000064!1.21e-08!99;UBERON:0001017!1.27e-08!73;UBERON:0005743!1.27e-08!73;UBERON:0000955!1.56e-08!50;UBERON:0006238!1.56e-08!50;UBERON:0001049!2.70e-08!52;UBERON:0005068!2.70e-08!52;UBERON:0006241!2.70e-08!52;UBERON:0007135!2.70e-08!52;UBERON:0002616!3.66e-08!49;UBERON:0004177!4.00e-08!29;UBERON:0000073!5.56e-08!75;UBERON:0001016!5.56e-08!75;UBERON:0000063!6.99e-08!35;UBERON:0002020!1.55e-07!34;UBERON:0002619!2.86e-07!17;UBERON:0000072!5.07e-07!27
|ontology_enrichment_uberon=UBERON:0007811!2.99e-14!86;UBERON:0000153!2.73e-13!94;UBERON:0002370!1.29e-09!23;UBERON:0000974!1.29e-09!23;UBERON:0004807!1.29e-09!23;UBERON:0005058!1.29e-09!23;UBERON:0003351!1.29e-09!23;UBERON:0009113!1.29e-09!23;UBERON:0003295!1.29e-09!23;UBERON:0009722!1.29e-09!23;UBERON:0005562!1.29e-09!23;UBERON:0007690!1.29e-09!23;UBERON:0006562!7.11e-09!24;UBERON:0003408!7.11e-09!24;UBERON:0001557!7.11e-09!24;UBERON:0001042!7.11e-09!24;UBERON:0008814!7.11e-09!24;UBERON:0009145!7.11e-09!24;UBERON:0002021!8.42e-09!10;UBERON:0000411!8.42e-09!10;UBERON:0001950!8.42e-09!10;UBERON:0000064!1.21e-08!99;UBERON:0001017!1.27e-08!73;UBERON:0005743!1.27e-08!73;UBERON:0000955!1.56e-08!50;UBERON:0006238!1.56e-08!50;UBERON:0001049!2.70e-08!52;UBERON:0005068!2.70e-08!52;UBERON:0006241!2.70e-08!52;UBERON:0007135!2.70e-08!52;UBERON:0002616!3.66e-08!49;UBERON:0004177!4.00e-08!29;UBERON:0000073!5.56e-08!75;UBERON:0001016!5.56e-08!75;UBERON:0000063!6.99e-08!35;UBERON:0002020!1.55e-07!34;UBERON:0002619!2.86e-07!17;UBERON:0000072!5.07e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.48e-19,54;UBERON:0001049,9.18e-17,52;UBERON:0005068,9.18e-17,52;UBERON:0006241,9.18e-17,52;UBERON:0007135,9.18e-17,52;UBERON:0001017,5.42e-16,73;UBERON:0002021,1.91e-15,10;UBERON:0000411,1.91e-15,10;UBERON:0001950,1.91e-15,10;UBERON:0001016,2.59e-15,75;UBERON:0002616,2.28e-14,46;UBERON:0000955,6.50e-14,47;UBERON:0006238,6.50e-14,47;UBERON:0002619,2.60e-13,17;UBERON:0002020,3.88e-13,34;UBERON:0002346,3.97e-12,64;UBERON:0003075,3.97e-12,64;UBERON:0007284,3.97e-12,64;UBERON:0000956,1.06e-11,21;UBERON:0001869,1.06e-11,21;UBERON:0000203,1.06e-11,21;UBERON:0003528,1.16e-11,29;UBERON:0002791,1.16e-11,29;UBERON:0001893,1.16e-11,29;UBERON:0003080,1.29e-11,40;UBERON:0002370,2.29e-11,23;UBERON:0000974,2.29e-11,23;UBERON:0004807,2.29e-11,23;UBERON:0005058,2.29e-11,23;UBERON:0003351,2.29e-11,23;UBERON:0009113,2.29e-11,23;UBERON:0003295,2.29e-11,23;UBERON:0009722,2.29e-11,23;UBERON:0005562,2.29e-11,23;UBERON:0007690,2.29e-11,23;UBERON:0004121,5.57e-11,95;UBERON:0000924,5.57e-11,95;UBERON:0006601,5.57e-11,95;UBERON:0002780,7.11e-11,39;UBERON:0001890,7.11e-11,39;UBERON:0006240,7.11e-11,39;UBERON:0006562,9.93e-11,24;UBERON:0003408,9.93e-11,24;UBERON:0001557,9.93e-11,24;UBERON:0001042,9.93e-11,24;UBERON:0008814,9.93e-11,24;UBERON:0009145,9.93e-11,24;UBERON:0010371,1.37e-10,73;UBERON:0000483,1.30e-09,174;UBERON:0000119,2.31e-09,176;UBERON:0000072,4.16e-09,27;UBERON:0003056,1.86e-08,49;UBERON:0004177,3.21e-08,29;UBERON:0005057,3.21e-08,29;UBERON:0011216,6.30e-08,194;UBERON:0010314,1.86e-07,92
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,1.267098499365,1.63845168425395,0.68487187290202,0.8774937489487,0.856003649656029,0.961624426608971,0,0,0.699561878128147,0.315462165358238,0.137114433605739,0.42438965179803,1.02051948181284,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.33166941804883,3.67093504323363,0,1.09012578190223,2.19686182734472,1.94429899074283,0.279972843250725,0,0,2.90144856804538,1.00828139742739,1.02903774414379,1.43266719969378,0,0,0,0,0,0,0,0,0.7104801149461,1.79760066311043,1.92109152660777,0,0,0,1.99955689082663,1.32521124570968,0,0,0,3.30347642998166,1.27687338085188,2.61131106535614,0,0,0,2.23346399201105,2.8138130501584,2.75036845998258,0.589257170947335,1.13897344639282,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,0,30.369772487951,0.766371165625774,0,0,0,1.19832511523858,0.915001205637253,0.251308704225729,1.39059456153821,2.81287003063364,2.28566849015516,1.46017136760982,0.203678727700633,0.373220911830279,0.252722758433675,0.420883711772948,0,0,0,0,0.340182495756639,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,1.05144974282064,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0.432276099749388,0,0.379335801906163,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.75817529888305,0.819674726883377,0.504941854408746,0.315508219416257,0,0,0,0,0,1.21443210502468,0.876767573733936,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.824850614862677,0,0,0,0,0,0.614870295887855,0,0.727067458955011,0.356497378384721,0,0,1.03135543248187,1.36175842301515,0,0,0,0,0.178368817602071,0,0,0.938686832254841,0,0.441056796109924,0,1.45317984026315,0.0603129249281559,0.358117032009409,0.656563598980245,1.45740418314925,1.11255181206306,0.512612642393558,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,9.79634473947353,0,0.924398614483445,5.3267537420896,3.40150721768215,3.77494574084403,3.00488623799922,3.10148007066612,4.54349024766664,4.41999478598999,3.62974266492626,4.38560463328886,4.71438024037614,4.67507608726276,0,0,0,0,0.386379188064381,0.93841237725591,0.183151624267265,0.214368379079066,0,5.0827665835536,1.38097570952153,3.43737308063638,3.43706364687375,2.74033007908257,4.5323633843382,4.72515750162264,4.5032120322422,2.26571204492102,4.65984280576638,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.505394423527595,0.25347929989024,0,0.37456602987953,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.436039249896986,0.0941093804153306,0,0.365855945745545,0,0.543216455383447,0,0,0.0985044823755635,0,0.309873682371932,0.578719832943424,0,0,0,0,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,1.267098499365,1.63845168425395,0.68487187290202,0.8774937489487,0.856003649656029,0.961624426608971,0,0,0.699561878128147,0.315462165358238,0.137114433605739,0.42438965179803,1.02051948181284,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.33166941804883,3.67093504323363,0,1.09012578190223,2.19686182734472,1.94429899074283,0.279972843250725,0,0,2.90144856804538,1.00828139742739,1.02903774414379,1.43266719969378,0,0,0,0,0,0,0,0,0.7104801149461,1.79760066311043,1.92109152660777,0,0,0,1.99955689082663,1.32521124570968,0,0,0,3.30347642998166,1.27687338085188,2.61131106535614,0,0,0,2.23346399201105,2.8138130501584,2.75036845998258,0.589257170947335,1.13897344639282,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,0,30.369772487951,0.766371165625774,0,0,0,1.19832511523858,0.915001205637253,0.251308704225729,1.39059456153821,2.81287003063364,2.28566849015516,1.46017136760982,0.203678727700633,0.373220911830279,0.252722758433675,0.420883711772948,0,0,0,0,0.340182495756639,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,1.05144974282064,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0.432276099749388,0,0.379335801906163,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.75817529888305,0.819674726883377,0.504941854408746,0.315508219416257,0,0,0,0,0,1.21443210502468,0.876767573733936,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.824850614862677,0,0,0,0,0,0.614870295887855,0,0.727067458955011,0.356497378384721,0,0,1.03135543248187,1.36175842301515,0,0,0,0,0.178368817602071,0,0,0.938686832254841,0,0.441056796109924,0,1.45317984026315,0.0603129249281559,0.358117032009409,0.656563598980245,1.45740418314925,1.11255181206306,0.512612642393558,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,9.79634473947353,0,0.924398614483445,5.3267537420896,3.40150721768215,3.77494574084403,3.00488623799922,3.10148007066612,4.54349024766664,4.41999478598999,3.62974266492626,4.38560463328886,4.71438024037614,4.67507608726276,0,0,0,0,0.386379188064381,0.93841237725591,0.183151624267265,0.214368379079066,0,5.0827665835536,1.38097570952153,3.43737308063638,3.43706364687375,2.74033007908257,4.5323633843382,4.72515750162264,4.5032120322422,2.26571204492102,4.65984280576638,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.505394423527595,0.25347929989024,0,0.37456602987953,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.436039249896986,0.0941093804153306,0,0.365855945745545,0,0.543216455383447,0,0,0.0985044823755635,0,0.309873682371932,0.578719832943424,0,0,0,0,0.220591419119515,0.231867835620421
|short_description=p@chr9:43855473..43855505,+
|short_description=p@chr9:43855473..43855505,+
}}
}}

Revision as of 18:26, 13 November 2012

Short description:p@chr9:43855473..43855505, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:43855473..43855505, +
Coexpression cluster:MCL_coexpression_mm9:42
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr9:43855473..43855505+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I230.37
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B59.80
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C44.54
thymus, neonate N07.CNhs11211.713-19D34.42
thymus, neonate N10.CNhs11194.748-24E43.63
thymus, neonate N20.CNhs11186.820-7A24.39
thymus, neonate N25.CNhs11125.1362-25G74.71
thymus, neonate N30.CNhs11132.1393-42G24.68
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.48e-1954
neural tube9.18e-1752
neural rod9.18e-1752
future spinal cord9.18e-1752
neural keel9.18e-1752
central nervous system5.42e-1673
occipital lobe1.91e-1510
visual cortex1.91e-1510
neocortex1.91e-1510
nervous system2.59e-1575
regional part of brain2.28e-1446
brain6.50e-1447
future brain6.50e-1447
regional part of cerebral cortex2.60e-1317
gray matter3.88e-1334
neurectoderm3.97e-1264
neural plate3.97e-1264
presumptive neural plate3.97e-1264
cerebral cortex1.06e-1121
cerebral hemisphere1.06e-1121
pallium1.06e-1121
brain grey matter1.16e-1129
regional part of telencephalon1.16e-1129
telencephalon1.16e-1129
anterior neural tube1.29e-1140
thymus2.29e-1123
neck2.29e-1123
respiratory system epithelium2.29e-1123
hemolymphoid system gland2.29e-1123
pharyngeal epithelium2.29e-1123
thymic region2.29e-1123
pharyngeal gland2.29e-1123
entire pharyngeal arch endoderm2.29e-1123
thymus primordium2.29e-1123
early pharyngeal endoderm2.29e-1123
ectoderm-derived structure5.57e-1195
ectoderm5.57e-1195
presumptive ectoderm5.57e-1195
regional part of forebrain7.11e-1139
forebrain7.11e-1139
future forebrain7.11e-1139
pharynx9.93e-1124
gland of gut9.93e-1124
upper respiratory tract9.93e-1124
chordate pharynx9.93e-1124
pharyngeal arch system9.93e-1124
pharyngeal region of foregut9.93e-1124
ecto-epithelium1.37e-1073
epithelium1.30e-09174
cell layer2.31e-09176
segment of respiratory tract4.16e-0927
pre-chordal neural plate1.86e-0849
hemopoietic organ3.21e-0829
immune organ3.21e-0829
organ system subdivision6.30e-08194
structure with developmental contribution from neural crest1.86e-0792







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:43855473..43855505,%2B&oldid=2270578"