FFCP PHASE1:Mm9::chr4:107699912..107699948,-: Difference between revisions
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|id=chr4:107699912..107699948,- | |id=chr4:107699912..107699948,- | ||
|ontology_enrichment_celltype=CL:0002563!9.20e-09!9;CL:0002251!9.20e-09!9;CL:0000075!2.43e-08!7;CL:0000473!2.02e-07!3;CL:0000627!2.02e-07!3;CL:0000682!2.02e-07!3;CL:0000066!4.03e-07!25;CL:0000239!7.20e-07!6;CL:0000677!7.20e-07!6;CL:0000212!7.20e-07!6;CL:0000584!7.20e-07!6 | |ontology_enrichment_celltype=CL:0002563!9.20e-09!9;CL:0002251!9.20e-09!9;CL:0000075!2.43e-08!7;CL:0000473!2.02e-07!3;CL:0000627!2.02e-07!3;CL:0000682!2.02e-07!3;CL:0000066!4.03e-07!25;CL:0000239!7.20e-07!6;CL:0000677!7.20e-07!6;CL:0000212!7.20e-07!6;CL:0000584!7.20e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.57e-13,6;CL:0000677,3.57e-13,6;CL:0000584,3.57e-13,6;CL:0000075,2.57e-11,7;CL:0002563,7.84e-09,9;CL:0002251,7.84e-09,9;CL:0000682,8.97e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.47e-21!43;UBERON:0000344!1.66e-19!15;UBERON:0001242!6.26e-16!13;UBERON:0000060!6.26e-16!13;UBERON:0001262!6.26e-16!13;UBERON:0004786!6.26e-16!13;UBERON:0005409!1.09e-15!59;UBERON:0004923!3.79e-13!24;UBERON:0000485!3.53e-09!11;UBERON:0003350!9.20e-09!9;UBERON:0004808!9.20e-09!9;UBERON:0001277!9.20e-09!9;UBERON:0000331!3.50e-07!3;UBERON:0002116!3.50e-07!3;UBERON:0001204!3.50e-07!3;UBERON:0001168!3.50e-07!3 | |ontology_enrichment_uberon=UBERON:0000160!1.47e-21!43;UBERON:0000344!1.66e-19!15;UBERON:0001242!6.26e-16!13;UBERON:0000060!6.26e-16!13;UBERON:0001262!6.26e-16!13;UBERON:0004786!6.26e-16!13;UBERON:0005409!1.09e-15!59;UBERON:0004923!3.79e-13!24;UBERON:0000485!3.53e-09!11;UBERON:0003350!9.20e-09!9;UBERON:0004808!9.20e-09!9;UBERON:0001277!9.20e-09!9;UBERON:0000331!3.50e-07!3;UBERON:0002116!3.50e-07!3;UBERON:0001204!3.50e-07!3;UBERON:0001168!3.50e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.84e-37,31;UBERON:0005409,1.17e-23,47;UBERON:0000344,9.80e-15,15;UBERON:0001242,7.18e-13,13;UBERON:0001262,7.18e-13,13;UBERON:0004786,7.18e-13,13;UBERON:0001007,2.40e-09,116;UBERON:0001555,2.40e-09,116;UBERON:0007026,2.40e-09,116;UBERON:0004119,3.84e-09,118;UBERON:0000925,3.84e-09,118;UBERON:0006595,3.84e-09,118;UBERON:0004923,6.15e-09,24;UBERON:0003350,7.84e-09,9;UBERON:0004808,7.84e-09,9;UBERON:0001277,7.84e-09,9;UBERON:0004921,2.64e-08,114;UBERON:0000485,3.03e-07,11 | |||
|phase1_expression=0,3.83872948403297,3.63999391511629,9.0739263392049,6.01074875935617,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.319984845586813,1.14704640533585,1.72269589234506,0.86152399231815,1.29282739611533,0.570070258369122,2.01624103807945,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0.219550115291051,0.402619256281115,0,0,5.94753809370836,6.87571473325215,0,0,0,0,0,0.380451252225118,6.16887780007865,1.64698954724011,2.26201687920243,1.98956472041151,0.974820435595601,8.98819408654222,7.3486936957396,5.37681437786791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,3.83872948403297,3.63999391511629,9.0739263392049,6.01074875935617,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.319984845586813,1.14704640533585,1.72269589234506,0.86152399231815,1.29282739611533,0.570070258369122,2.01624103807945,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0.219550115291051,0.402619256281115,0,0,5.94753809370836,6.87571473325215,0,0,0,0,0,0.380451252225118,6.16887780007865,1.64698954724011,2.26201687920243,1.98956472041151,0.974820435595601,8.98819408654222,7.3486936957396,5.37681437786791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p5@Podn | |short_description=p5@Podn | ||
}} | }} |
Revision as of 18:02, 13 November 2012
Short description: | p5@Podn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Podn_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -17bp_to_ENSMUST00000044248_5end |
EntrezGene: | Podn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.57e-13 | 6 |
gut absorptive cell | 3.57e-13 | 6 |
enterocyte | 3.57e-13 | 6 |
columnar/cuboidal epithelial cell | 2.57e-11 | 7 |
intestinal epithelial cell | 7.84e-09 | 9 |
epithelial cell of alimentary canal | 7.84e-09 | 9 |
M cell of gut | 8.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.84e-37 | 31 |
gastrointestinal system | 1.17e-23 | 47 |
mucosa | 9.80e-15 | 15 |
intestinal mucosa | 7.18e-13 | 13 |
wall of intestine | 7.18e-13 | 13 |
gastrointestinal system mucosa | 7.18e-13 | 13 |
digestive system | 2.40e-09 | 116 |
digestive tract | 2.40e-09 | 116 |
primitive gut | 2.40e-09 | 116 |
endoderm-derived structure | 3.84e-09 | 118 |
endoderm | 3.84e-09 | 118 |
presumptive endoderm | 3.84e-09 | 118 |
organ component layer | 6.15e-09 | 24 |
epithelium of mucosa | 7.84e-09 | 9 |
gastrointestinal system epithelium | 7.84e-09 | 9 |
intestinal epithelium | 7.84e-09 | 9 |
subdivision of digestive tract | 2.64e-08 | 114 |
simple columnar epithelium | 3.03e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.