Personal tools

Coexpression cluster:C2213: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 3: Line 3:
|full_id=C2213_salivary_esophagus_tonsil_throat_tongue_submaxillary_parotid
|full_id=C2213_salivary_esophagus_tonsil_throat_tongue_submaxillary_parotid
|id=C2213
|id=C2213
|ontology_enrichment_celltype=CL:0000223!2.79e-27!59;CL:0002076!1.37e-24!43;CL:0002368!3.95e-13!13;CL:0002251!4.23e-13!21;CL:0000066!2.93e-09!254;CL:0000622!7.66e-09!5;CL:0002202!2.99e-08!9;CL:0002632!2.99e-08!9;CL:0000154!2.97e-07!6;CL:0002159!8.18e-07!13
|ontology_enrichment_celltype=CL:0000223!1.17e-11!58;CL:0002076!1.57e-09!42;CL:0002621!1.24e-08!3;CL:0000244!6.51e-07!4;CL:0000731!6.51e-07!4
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0004119!8.99e-30!169;UBERON:0000925!8.99e-30!169;UBERON:0006595!8.99e-30!169;UBERON:0001007!1.11e-24!155;UBERON:0001555!1.11e-24!155;UBERON:0007026!1.11e-24!155;UBERON:0000077!8.45e-24!130;UBERON:0004921!1.05e-21!129;UBERON:0004185!1.05e-21!129;UBERON:0001004!4.15e-20!72;UBERON:0001041!1.48e-19!98;UBERON:0000161!2.34e-17!35;UBERON:0005911!5.85e-17!82;UBERON:0000166!3.12e-15!21;UBERON:0002365!7.63e-14!31;UBERON:0002330!7.63e-14!31;UBERON:0002530!7.06e-13!59;UBERON:0003929!9.81e-12!54;UBERON:0005177!9.93e-12!107;UBERON:0000165!1.35e-11!28;UBERON:0000930!1.35e-11!28;UBERON:0000466!2.26e-11!126;UBERON:0001044!4.10e-11!6;UBERON:0003293!4.10e-11!6;UBERON:0003294!4.10e-11!6;UBERON:0010047!4.10e-11!6;UBERON:0000167!4.10e-11!6;UBERON:0003102!4.80e-11!95;UBERON:0003104!6.01e-11!238;UBERON:0009142!6.01e-11!238;UBERON:0000065!1.18e-10!53;UBERON:0003408!3.17e-10!10;UBERON:0005178!3.46e-09!34;UBERON:0002224!3.46e-09!34;UBERON:0009569!4.69e-09!113;UBERON:0000475!7.04e-09!365;UBERON:0005181!8.53e-09!35;UBERON:0009497!2.34e-08!25;UBERON:0000015!2.34e-08!25;UBERON:0002423!2.34e-08!25;UBERON:0006235!2.34e-08!25;UBERON:0004161!2.34e-08!25;UBERON:0007196!3.10e-08!14;UBERON:0001558!3.10e-08!14;UBERON:0000481!1.41e-07!347;UBERON:0000464!2.65e-07!104;UBERON:0000078!7.72e-07!18;UBERON:0000072!8.37e-07!46;UBERON:0001444!9.00e-07!48
|ontology_enrichment_uberon=UBERON:0000161!1.31e-17!36;UBERON:0000166!3.62e-16!22;UBERON:0004119!1.01e-15!160;UBERON:0000925!1.01e-15!160;UBERON:0006595!1.01e-15!160;UBERON:0001004!1.18e-12!74;UBERON:0000165!5.73e-12!29;UBERON:0000930!5.73e-12!29;UBERON:0004921!6.82e-12!118;UBERON:0001007!1.48e-11!145;UBERON:0001555!1.48e-11!145;UBERON:0007026!1.48e-11!145;UBERON:0001041!3.07e-10!87;UBERON:0001042!9.59e-10!10;UBERON:0009145!9.59e-10!10;UBERON:0003408!1.44e-09!10;UBERON:0001044!1.58e-09!6;UBERON:0003293!1.58e-09!6;UBERON:0003294!1.58e-09!6;UBERON:0010047!1.58e-09!6;UBERON:0000167!1.58e-09!6;UBERON:0001723!4.49e-09!3;UBERON:0001033!4.49e-09!3;UBERON:0010056!4.49e-09!3;UBERON:0006562!7.27e-09!11;UBERON:0001949!1.24e-08!3;UBERON:0002365!3.70e-08!31;UBERON:0002330!3.70e-08!31;UBERON:0002530!7.48e-08!59;UBERON:0000153!9.19e-08!62;UBERON:0007811!9.19e-08!62;UBERON:0005911!1.24e-07!82;UBERON:0002372!1.46e-07!1;UBERON:0001961!1.46e-07!1;UBERON:0001744!1.46e-07!1;UBERON:0001735!1.46e-07!1;UBERON:0001736!1.86e-07!1;UBERON:0006298!1.86e-07!1;UBERON:0000065!2.37e-07!54;UBERON:0000989!3.60e-07!1;UBERON:0008811!3.60e-07!1;UBERON:0006258!3.60e-07!1;UBERON:0005876!3.60e-07!1;UBERON:0004874!3.60e-07!1;UBERON:0003350!5.39e-07!8;UBERON:0003929!5.84e-07!54;UBERON:0000475!9.37e-07!264
|tfbs_overrepresentation=0.191353,0.0774498,0.50138,0.0631091,0.257053,0.363996,0.0569281,0.510252,0.043387,0.0341265,0.181435,0.288577,0.243414,0.164339,0.193153,0.0816702,0.183412,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.124486,0.0550418,0.276459,0.268949,0.119094,0.186914,0.122514,0.26347,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.788552,0.0568767,0.157159,0.0879352,0.126525,0.0326801,0.182216,0.2375,0.157881,0.0480278,0.0503649,0.234372,0.145553,0.158244,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.273035,0.103044,0.138225,0.0390464,0.194086,0.142115,0.0999599,0.0720888,0.0667453,0.439574,0.0792005,0.113084,0.216289,0.470097,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.368178,0.320801,0.0848546,0.268505,0.713984,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.112199,0.150351,0.690341,0.199405,0.121709,0.347653,0.0759036,0.350158,0.184542,0.0491142,0.280878,0.0541957,0.0883058,0.423154,0.187509,0.34189,0.23573,0.0450707,0.194256,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,0.275495,0.182323,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.164103,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.262198,0.202388,0.701894,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.186826,0.233377,0.0352845,0.0565357,0.153577,0.0984158,0.29227,0.0683304,0.0447121,0.291455,0.124982,0.152417,0.192028,0.346873,0.149398,0.0530169,0.166112,0.0534404,0.392741,0.2321,0.179282,0.564569,0.0715212,0.105131,0.118265,0.182591,0.234755,0.230552,0.0472274,0.205973,0.0135204,0.0363736,0.15105,0.0970713,0.155237,0.236268,0.0532055,0.108938,0.224443,0.140245,0.241581,0.160458,0.292792,0.147332,0.0622664,0.102951,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.329956,0.346995,0.197158,0.265132,0.230439,0.0606832,0.136664,0.158184,0.147626,0.393313,0.218801,0.21271,0.132273,0.0830988,0.134907,0.184613,0.462724,0.202467,0.208718,0.0972471,0.165147,0.180711,0.112956,0.0797807,0.0790532,0.309911,0.476758,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,0.128998,0.109226,0.151958,0.178155,0.107176,0.146021,0.463127,0.15291,0.206234,0.238926,0.239646,0.128521,0.1286,0.207017,0.14037,0.259646,0.0916845,0.687863,0.0816983,0.226367,0.211672,0.167038,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.352707,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.690367,0.495926,0.333291,0.73998,0.3024,0.407767,0.179737,0.420045,0.381628,0.332539,0.545329,0.129819,0.0881702,0.22808,0.414547,0.489273,0.413223,0.084046,0.364388,0.34505,0.369161,0.500422,0.147194,0.687176,0.702495,0.241524,0.122191,0.234628,0.168228,0.143893,0.41477,0.279946,0.170724,0.467825,0.563725,0.751064,0.264959,0.624969,0.460819,0.511459,0.586668,0.322903,0.350886,0.380582,0.218919,0.398372,0.286293,0.606558,0.34907,0.359128,0.395864,0.683133,0.368633,0.188516,0.317802,0.162437,0.369971,0.578349,0.0434864,0.464342,0.683088,0.131933,0.235444,0.804772,0.899283,0.840703,0.349116,0.302142,0.239545,0.432689,0.272581,0.343881,0.730486,0.606382,0.250139,0.258511,0.316925,0.356561,0.210197,0.211506,0.0883859,0.0962508,0.238465,0.341199,0.853221,0.6873,0.508325,0.436735,0.651927,0.656755,0.54723,0.280307,0.393583,0.469888,0.0596868,0.0984075,0.293026,0.753513,0.694744,0.605423,0.372182,0.429205,0.578951,0.365653,0.41035,0.784024,0.35234,0.888839,0.172079,0.291917,0.421082,0.25441,0.202782,0.672876,0.517933,0.584705,0.00657735,0.0746589,0.73448,0.419676,0.188259,0.189182,0.477589,0.46699,0.187849,0.560187,0.321282,0.198207,0.0616078,0.178485,0.329745,0.175552,0.129238,0.0904061,0.370995,0.360161,0.429696,0.386216,0.385297,0.346931,0.239407,0.259338,0.360203,0.333725,0.447838,0.289666,0.500627,0.513045,0.452694,0.565545,0.287542,0.265037,0.261923,0.754776,0.53531,0.341771,0.0186884,0.290547,0.356381,0.184395,0.194887,0.256884,0.206945,0.304719,0.462531,0.296994,0.244339,0.117049,0.0786167,0.629381,0.376317,0.433821,0.0211186,0.436806,0.576549,0.499072,0.396083,0.734628,0.0922563,0.0919254,0.0735469,0.248103,0.102621,0.0760107,0.187642,0.286156,0.261868,0.541583,0.540322,0.247151,0.146385,0.365815,0.0576261,0.0847761,0.164977,0.175633,0.139918,0.34669,0.0828344,0.4729,0.0238089,0.383126,0.354433,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.249506,0.432751,0.0660736,0.108971,0.0879235,0.235214,0.145546,0.28124,0.417003,0.251882,0.172263,0.243319,0.0637178,0.257309,0.500692,0.166608,0.227224,0.238082,0.219023,0.115115,0.124916,0.0149794,0.28498,0.140114,0.348988,0.00641248,0.224626,0.183585,0.271662,0.03989,0.171436,0.05892,0.0691994,0.268299,0.198844,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.621787,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.209692,0.248936,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.324236,0.220368,0.258624,0.064656,0.226143,0.460406,0.0438521,0.435508,0.281453,0.0522771,0.0787278,0.515487,0.159873,0.142462,0.143935,0.332403,0.0379537,0.6545,0.187953,0.051459,0.114868,0.0726892,0.18732,0.32305,0.278397,0.245002,0.170848,0.487259,0.302909,0.363016,0.100188,0.223102,0.107653,0.235857,0.419621,0.191914,0.184022,0.216557,0.182956,0.116818,0.389792,0.36316,0.0625685,0.124464,0.544477,0.173134,0.101893,0.142875,0.167635,0.171311,0.20386,0.548036,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.187329,0.0451012,0.0976639,0.351199,0.833813,0.415079,0.278645,0.365775,0.155708,0.248017,0.22995,0.652972,0.0760151,0.0629459,0.486024,0.0803251,0.226641,0.379174,0.0939463,0.286748,0.367925,0.0471607,0.163865,0.226359,0.626334,0.974549,0.265324,0.279778,0.141699,0.0887743,0.142302,0.0653269,0.125712,0.264432,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.149346,0.121978,0.22302,0.137423,0.284016,0.0754883,0.299492,0.100006,0.362866,0.197817,0.251078,0.279874,0.133127,0.410303,0.223717,0.426452,0.196838,0.0826805,0.246601,0.193021,0.608002,0.202165,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.220353,0.24948,0.178639,0.291976,0.320355,0.364334,0.15547,0.110256,0.415419,0.14794,0.147307,0.240761,0.225961,0.124417,0.335582,0.317428,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.690952,0.21618,0.243266,0.107021,0.238657,0.20272,0.392453,0.61565,0.0780061,0.315336,0.230477,0.279823,0.295555,0.502112,0.724669,0.0478217,0.507599,0.170854,0.0575231,0.174063,0.514243,0.1267,0.00888122,0.154964,0.296013,0.282366,0.181196,0.459994,0.523209,0.548059,0.25423,0.490559,0.45013,0.500698,0.472542,0.322168,0.160788,0.529642,0.509113,0.483077,0.590496,0.0671621,0.541914,0.627201,0.765905,0.757308,0.290703,0.254935,0.366999,0.478691,0.360199,0.608176,0.0937029,0.824761,0.365494,0.212703,0.56318,0.364079,0.315494,0.579886,0.421038,0.569409,0.00783381,0.545608,0.310552,0.594773,0.483764,0.829658,0.784052,0.209437,0.284058,0.748403,0.232518,0.169076,0.464001,0.60737,0.214786,0.605327,0.839946,0.860705,0.261575,0.257956,0.264245,0.379063,0.326516,0.522925,0.113006,0.0277366,0.202522,0.183837,0.507324,0.126097,0.3955,0.442469,0.212239,0.048546,0.156999,0.0742603,0.301684,0.39549,0.234254,0.357409,0.328421,0.721266,0.50338,0.252827,0.404625,0.172147,0.424691,0.715362,0.0286876,0.259048,0.635682,0.0854676,0.044968,0.512545,0.512178,0.0515768,0.829402,0.321001,0.263302,0.552023,0.180735,0.439629,0.0252414,0.254659,0.109605,0.397869,0.582542,0.226491,0.102502,0.463987,0.627953,0.156131,0.454761,0.00397922,0.0295677,0.452129,0.301581,0.261657,0.346776,0.466529,0.187223,0.438176,0.349112,0.741477,0.385425,0.307816,0.128211,0.386339,0.0131065,0.232374,0.478745,0.24434,0.319747,0.475047,0.557967,0.241014,0.282281,0.612712,0.2536,0.246827,0.0519643,0.70712,0.387134,0.559969,0.358813,0.668972,0.210703,0.493455,0.346636,0.457747,0.348802,0.137708,0.579645,0.447581,0.42505,0.254628,0.713293,0.139532,0.416962,0.264955,0.378333,0.0473484,0.264038,0.22798,0.102495,0.0703938,0.263896,0.0446972,0.24452,0.329284,0.242783,0.0947248,0.336551,0.210656,0.246234,0.211271,0.281295,0.267248,0.118257,0.125087,0.215123,0.321224,0.469461,0.325254,0.0392149,0.546295,0.231754,0.249415,0.283107,0.285648,0.427316,0.0890097,0.279553,0.25563,0.240967,0.160955,0.256687,0.0432189,0.122439,0.16188,0.23235,0.290415,0.353147,0.112422,0.170886,0.267687,0.0560879,0.284866,0.0887542,0.267811,0.338547,0.147872,0.189388,0.293546,0.210125,0.292967,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.341188,0.259328,0.437467,0.201057,0.15696,0.129351,0.141936,0.0786166,0.276997,0.205513,0.282389,0.251421,0.162089,0.330223,0.387837,0.233244,0.207281,0.327401,0.195748,0.27845,0.161712,0.237871,0.239139,0.095257,0.328852,0.332769,0.262022,0.274403,0.266687,0.184534,0.248707,0.0567862,0.15156,0.287598,0.313858,0.223773,0.25788,0.181895,0.253768,0.30702,0.202977,0.170837,0.327002,0.28543,0.222656,0.228479,0.127111,0.259989,0.390754,0.355805,0.279739,0.108118,0.259901,0.139723,0.0708274,0.0710478,0.196248,0.102645,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.298673,0.244395,0.106889,0.128632,0.0845989,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.142846,0.0583767,0.088258,0.117657,0.0486914,0.175784,0.262778,0.373453,0.362662,0.433518,0.184359,0.334474,0.325785,0.257476,0.291176,0.376537,0.322827,0.229571,0.359036,0.335984,0.171704,0.208256,0.265058,0.256405,0.0756763,0.302133,0.40806,0.151361,0.279606,0.286696,0.150674,0.251128,0.246177,0.35674,0.35852,0.318525,0.213257,0.287217,0.122782,0.410951,0.289049,0.266974,0.125746,0.112897,0.398354,0.222091,0.205977,0.34423,0.0936726,0.343425,0.132374,0.285122,0.22741,0.203996,0.276721,0.321965,0.264707,0.450113
|tfbs_overrepresentation=0.191353,0.0774498,0.50138,0.0631091,0.257053,0.363996,0.0569281,0.510252,0.043387,0.0341265,0.181435,0.288577,0.243414,0.164339,0.193153,0.0816702,0.183412,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.124486,0.0550418,0.276459,0.268949,0.119094,0.186914,0.122514,0.26347,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.788552,0.0568767,0.157159,0.0879352,0.126525,0.0326801,0.182216,0.2375,0.157881,0.0480278,0.0503649,0.234372,0.145553,0.158244,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.273035,0.103044,0.138225,0.0390464,0.194086,0.142115,0.0999599,0.0720888,0.0667453,0.439574,0.0792005,0.113084,0.216289,0.470097,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.368178,0.320801,0.0848546,0.268505,0.713984,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.112199,0.150351,0.690341,0.199405,0.121709,0.347653,0.0759036,0.350158,0.184542,0.0491142,0.280878,0.0541957,0.0883058,0.423154,0.187509,0.34189,0.23573,0.0450707,0.194256,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,0.275495,0.182323,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.164103,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.262198,0.202388,0.701894,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.186826,0.233377,0.0352845,0.0565357,0.153577,0.0984158,0.29227,0.0683304,0.0447121,0.291455,0.124982,0.152417,0.192028,0.346873,0.149398,0.0530169,0.166112,0.0534404,0.392741,0.2321,0.179282,0.564569,0.0715212,0.105131,0.118265,0.182591,0.234755,0.230552,0.0472274,0.205973,0.0135204,0.0363736,0.15105,0.0970713,0.155237,0.236268,0.0532055,0.108938,0.224443,0.140245,0.241581,0.160458,0.292792,0.147332,0.0622664,0.102951,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.329956,0.346995,0.197158,0.265132,0.230439,0.0606832,0.136664,0.158184,0.147626,0.393313,0.218801,0.21271,0.132273,0.0830988,0.134907,0.184613,0.462724,0.202467,0.208718,0.0972471,0.165147,0.180711,0.112956,0.0797807,0.0790532,0.309911,0.476758,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,0.128998,0.109226,0.151958,0.178155,0.107176,0.146021,0.463127,0.15291,0.206234,0.238926,0.239646,0.128521,0.1286,0.207017,0.14037,0.259646,0.0916845,0.687863,0.0816983,0.226367,0.211672,0.167038,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.352707,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.690367,0.495926,0.333291,0.73998,0.3024,0.407767,0.179737,0.420045,0.381628,0.332539,0.545329,0.129819,0.0881702,0.22808,0.414547,0.489273,0.413223,0.084046,0.364388,0.34505,0.369161,0.500422,0.147194,0.687176,0.702495,0.241524,0.122191,0.234628,0.168228,0.143893,0.41477,0.279946,0.170724,0.467825,0.563725,0.751064,0.264959,0.624969,0.460819,0.511459,0.586668,0.322903,0.350886,0.380582,0.218919,0.398372,0.286293,0.606558,0.34907,0.359128,0.395864,0.683133,0.368633,0.188516,0.317802,0.162437,0.369971,0.578349,0.0434864,0.464342,0.683088,0.131933,0.235444,0.804772,0.899283,0.840703,0.349116,0.302142,0.239545,0.432689,0.272581,0.343881,0.730486,0.606382,0.250139,0.258511,0.316925,0.356561,0.210197,0.211506,0.0883859,0.0962508,0.238465,0.341199,0.853221,0.6873,0.508325,0.436735,0.651927,0.656755,0.54723,0.280307,0.393583,0.469888,0.0596868,0.0984075,0.293026,0.753513,0.694744,0.605423,0.372182,0.429205,0.578951,0.365653,0.41035,0.784024,0.35234,0.888839,0.172079,0.291917,0.421082,0.25441,0.202782,0.672876,0.517933,0.584705,0.00657735,0.0746589,0.73448,0.419676,0.188259,0.189182,0.477589,0.46699,0.187849,0.560187,0.321282,0.198207,0.0616078,0.178485,0.329745,0.175552,0.129238,0.0904061,0.370995,0.360161,0.429696,0.386216,0.385297,0.346931,0.239407,0.259338,0.360203,0.333725,0.447838,0.289666,0.500627,0.513045,0.452694,0.565545,0.287542,0.265037,0.261923,0.754776,0.53531,0.341771,0.0186884,0.290547,0.356381,0.184395,0.194887,0.256884,0.206945,0.304719,0.462531,0.296994,0.244339,0.117049,0.0786167,0.629381,0.376317,0.433821,0.0211186,0.436806,0.576549,0.499072,0.396083,0.734628,0.0922563,0.0919254,0.0735469,0.248103,0.102621,0.0760107,0.187642,0.286156,0.261868,0.541583,0.540322,0.247151,0.146385,0.365815,0.0576261,0.0847761,0.164977,0.175633,0.139918,0.34669,0.0828344,0.4729,0.0238089,0.383126,0.354433,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.249506,0.432751,0.0660736,0.108971,0.0879235,0.235214,0.145546,0.28124,0.417003,0.251882,0.172263,0.243319,0.0637178,0.257309,0.500692,0.166608,0.227224,0.238082,0.219023,0.115115,0.124916,0.0149794,0.28498,0.140114,0.348988,0.00641248,0.224626,0.183585,0.271662,0.03989,0.171436,0.05892,0.0691994,0.268299,0.198844,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.621787,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.209692,0.248936,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.324236,0.220368,0.258624,0.064656,0.226143,0.460406,0.0438521,0.435508,0.281453,0.0522771,0.0787278,0.515487,0.159873,0.142462,0.143935,0.332403,0.0379537,0.6545,0.187953,0.051459,0.114868,0.0726892,0.18732,0.32305,0.278397,0.245002,0.170848,0.487259,0.302909,0.363016,0.100188,0.223102,0.107653,0.235857,0.419621,0.191914,0.184022,0.216557,0.182956,0.116818,0.389792,0.36316,0.0625685,0.124464,0.544477,0.173134,0.101893,0.142875,0.167635,0.171311,0.20386,0.548036,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.187329,0.0451012,0.0976639,0.351199,0.833813,0.415079,0.278645,0.365775,0.155708,0.248017,0.22995,0.652972,0.0760151,0.0629459,0.486024,0.0803251,0.226641,0.379174,0.0939463,0.286748,0.367925,0.0471607,0.163865,0.226359,0.626334,0.974549,0.265324,0.279778,0.141699,0.0887743,0.142302,0.0653269,0.125712,0.264432,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.149346,0.121978,0.22302,0.137423,0.284016,0.0754883,0.299492,0.100006,0.362866,0.197817,0.251078,0.279874,0.133127,0.410303,0.223717,0.426452,0.196838,0.0826805,0.246601,0.193021,0.608002,0.202165,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.220353,0.24948,0.178639,0.291976,0.320355,0.364334,0.15547,0.110256,0.415419,0.14794,0.147307,0.240761,0.225961,0.124417,0.335582,0.317428,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.690952,0.21618,0.243266,0.107021,0.238657,0.20272,0.392453,0.61565,0.0780061,0.315336,0.230477,0.279823,0.295555,0.502112,0.724669,0.0478217,0.507599,0.170854,0.0575231,0.174063,0.514243,0.1267,0.00888122,0.154964,0.296013,0.282366,0.181196,0.459994,0.523209,0.548059,0.25423,0.490559,0.45013,0.500698,0.472542,0.322168,0.160788,0.529642,0.509113,0.483077,0.590496,0.0671621,0.541914,0.627201,0.765905,0.757308,0.290703,0.254935,0.366999,0.478691,0.360199,0.608176,0.0937029,0.824761,0.365494,0.212703,0.56318,0.364079,0.315494,0.579886,0.421038,0.569409,0.00783381,0.545608,0.310552,0.594773,0.483764,0.829658,0.784052,0.209437,0.284058,0.748403,0.232518,0.169076,0.464001,0.60737,0.214786,0.605327,0.839946,0.860705,0.261575,0.257956,0.264245,0.379063,0.326516,0.522925,0.113006,0.0277366,0.202522,0.183837,0.507324,0.126097,0.3955,0.442469,0.212239,0.048546,0.156999,0.0742603,0.301684,0.39549,0.234254,0.357409,0.328421,0.721266,0.50338,0.252827,0.404625,0.172147,0.424691,0.715362,0.0286876,0.259048,0.635682,0.0854676,0.044968,0.512545,0.512178,0.0515768,0.829402,0.321001,0.263302,0.552023,0.180735,0.439629,0.0252414,0.254659,0.109605,0.397869,0.582542,0.226491,0.102502,0.463987,0.627953,0.156131,0.454761,0.00397922,0.0295677,0.452129,0.301581,0.261657,0.346776,0.466529,0.187223,0.438176,0.349112,0.741477,0.385425,0.307816,0.128211,0.386339,0.0131065,0.232374,0.478745,0.24434,0.319747,0.475047,0.557967,0.241014,0.282281,0.612712,0.2536,0.246827,0.0519643,0.70712,0.387134,0.559969,0.358813,0.668972,0.210703,0.493455,0.346636,0.457747,0.348802,0.137708,0.579645,0.447581,0.42505,0.254628,0.713293,0.139532,0.416962,0.264955,0.378333,0.0473484,0.264038,0.22798,0.102495,0.0703938,0.263896,0.0446972,0.24452,0.329284,0.242783,0.0947248,0.336551,0.210656,0.246234,0.211271,0.281295,0.267248,0.118257,0.125087,0.215123,0.321224,0.469461,0.325254,0.0392149,0.546295,0.231754,0.249415,0.283107,0.285648,0.427316,0.0890097,0.279553,0.25563,0.240967,0.160955,0.256687,0.0432189,0.122439,0.16188,0.23235,0.290415,0.353147,0.112422,0.170886,0.267687,0.0560879,0.284866,0.0887542,0.267811,0.338547,0.147872,0.189388,0.293546,0.210125,0.292967,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.341188,0.259328,0.437467,0.201057,0.15696,0.129351,0.141936,0.0786166,0.276997,0.205513,0.282389,0.251421,0.162089,0.330223,0.387837,0.233244,0.207281,0.327401,0.195748,0.27845,0.161712,0.237871,0.239139,0.095257,0.328852,0.332769,0.262022,0.274403,0.266687,0.184534,0.248707,0.0567862,0.15156,0.287598,0.313858,0.223773,0.25788,0.181895,0.253768,0.30702,0.202977,0.170837,0.327002,0.28543,0.222656,0.228479,0.127111,0.259989,0.390754,0.355805,0.279739,0.108118,0.259901,0.139723,0.0708274,0.0710478,0.196248,0.102645,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.298673,0.244395,0.106889,0.128632,0.0845989,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.142846,0.0583767,0.088258,0.117657,0.0486914,0.175784,0.262778,0.373453,0.362662,0.433518,0.184359,0.334474,0.325785,0.257476,0.291176,0.376537,0.322827,0.229571,0.359036,0.335984,0.171704,0.208256,0.265058,0.256405,0.0756763,0.302133,0.40806,0.151361,0.279606,0.286696,0.150674,0.251128,0.246177,0.35674,0.35852,0.318525,0.213257,0.287217,0.122782,0.410951,0.289049,0.266974,0.125746,0.112897,0.398354,0.222091,0.205977,0.34423,0.0936726,0.343425,0.132374,0.285122,0.22741,0.203996,0.276721,0.321965,0.264707,0.450113
}}
}}

Revision as of 12:11, 19 October 2012


Full id: C2213_salivary_esophagus_tonsil_throat_tongue_submaxillary_parotid



Phase1 CAGE Peaks

Hg19::chr12:52478546..52478552,+p@chr12:52478546..52478552
+
Hg19::chr19:51845384..51845409,-p1@VSIG10L
Hg19::chr20:31611186..31611191,+p10@BPIFB6
Hg19::chr22:30201087..30201093,-p5@ASCC2


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Cell Type
Ontology termp-valuen
endodermal cell1.17e-1158
endo-epithelial cell1.57e-0942
gingival epithelial cell1.24e-083
transitional epithelial cell6.51e-074
urothelial cell6.51e-074
Uber Anatomy
Ontology termp-valuen
orifice1.31e-1736
oral opening3.62e-1622
endoderm-derived structure1.01e-15160
endoderm1.01e-15160
presumptive endoderm1.01e-15160
respiratory system1.18e-1274
mouth5.73e-1229
stomodeum5.73e-1229
subdivision of digestive tract6.82e-12118
digestive system1.48e-11145
digestive tract1.48e-11145
primitive gut1.48e-11145
foregut3.07e-1087
chordate pharynx9.59e-1010
pharyngeal region of foregut9.59e-1010
gland of gut1.44e-0910
saliva-secreting gland1.58e-096
gland of oral region1.58e-096
gland of foregut1.58e-096
oral gland1.58e-096
oral cavity1.58e-096
tongue4.49e-093
gustatory system4.49e-093
future tongue4.49e-093
pharynx7.27e-0911
gingival epithelium1.24e-083
exocrine gland3.70e-0831
exocrine system3.70e-0831
gland7.48e-0859
anterior region of body9.19e-0862
craniocervical region9.19e-0862
endo-epithelium1.24e-0782
tonsil1.46e-071
mucosa-associated lymphoid tissue1.46e-071
lymphoid tissue1.46e-071
tonsillar ring1.46e-071
submandibular gland1.86e-071
submandibular gland primordium1.86e-071
respiratory tract2.37e-0754
penis3.60e-071
intromittent organ3.60e-071
lateral plate mesenchyme3.60e-071
undifferentiated genital tubercle3.60e-071
somatopleure3.60e-071
epithelium of mucosa5.39e-078
gut epithelium5.84e-0754
organism subdivision9.37e-07264


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

This analysis result is provided for C0 - C305 clusters.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=Coexpression_cluster:C2213&oldid=2248296"