FFCP PHASE2:Mm9::chr1:169619683..169619694,+
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| Short description: | p1@Lmx1a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Lmx1a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:148 |
| Association with transcript: | 0bp_to_ENSMUST00000028003, NM_033652, uc007dlc.1_5end |
| EntrezGene: | Lmx1a |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p1@Lmx1a |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| granule cell | 2.49e-12 | 3 |
| striatum neuron | 3.21e-12 | 3 |
| astrocyte of the cerebral cortex | 4.93e-09 | 2 |
| astrocyte of the hippocampus | 4.93e-09 | 2 |
| CNS neuron (sensu Vertebrata) | 2.81e-07 | 23 |
| neuroblast (sensu Vertebrata) | 2.81e-07 | 23 |
| neural cell | 3.78e-07 | 43 |
| ectodermal cell | 6.02e-07 | 44 |
| neurectodermal cell | 6.02e-07 | 44 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| basal ganglion | 1.13e-07 | 8 |
| nuclear complex of neuraxis | 1.13e-07 | 8 |
| aggregate regional part of brain | 1.13e-07 | 8 |
| collection of basal ganglia | 1.13e-07 | 8 |
| cerebral subcortex | 1.13e-07 | 8 |
| corpus striatum | 1.70e-07 | 5 |
| striatum | 1.70e-07 | 5 |
| ventral part of telencephalon | 1.70e-07 | 5 |
| future corpus striatum | 1.70e-07 | 5 |
| pre-chordal neural plate | 3.76e-07 | 49 |
Showing 1 to 10 of 13 entries
