FFCP PHASE2:Mm9::chr18:37303368..37303383,+
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| Short description: | p4@Pcdha10, p4@Pcdha11, p4@Pcdha12, p4@Pcdha1, p4@Pcdha9, p4@Pcdhac1, p4@Pcdhac2, p5@Pcdha2, p5@Pcdha4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Pcdha10_5end, CAGE_peak_4_at_Pcdha11_5end, CAGE_peak_4_at_Pcdha12_5end, CAGE_peak_4_at_Pcdha1_5end, CAGE_peak_4_at_Pcdha9_5end, CAGE_peak_4_at_Pcdhac1_5end, CAGE_peak_4_at_Pcdhac2_5end, CAGE_peak_5_at_Pcdha2_5end, CAGE_peak_5_at_Pcdha4_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | -239bp_to_ENSMUST00000047479, NM_001003672, uc008epk.2_5end |
| EntrezGene: | 116731,12936,12942,12943,192161,192164,353234,353236,353237 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p4@Pcdha10p4@Pcdha11p4@Pcdha12p4@Pcdha1p4@Pcdha9p4@Pcdhac1p4@Pcdhac2p5@Pcdha2p5@Pcdha4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.18e-22 | 23 |
| neuroblast (sensu Vertebrata) | 1.18e-22 | 23 |
| neuron | 6.25e-16 | 33 |
| neuronal stem cell | 6.25e-16 | 33 |
| neuroblast | 6.25e-16 | 33 |
| electrically signaling cell | 6.25e-16 | 33 |
| electrically responsive cell | 1.07e-12 | 39 |
| electrically active cell | 1.07e-12 | 39 |
| neural cell | 2.61e-12 | 43 |
| ectodermal cell | 6.54e-12 | 44 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 4.13e-42 | 54 |
| central nervous system | 6.67e-42 | 73 |
| nervous system | 1.68e-40 | 75 |
| neural tube | 7.30e-39 | 52 |
| neural rod | 7.30e-39 | 52 |
| future spinal cord | 7.30e-39 | 52 |
| neural keel | 7.30e-39 | 52 |
| neurectoderm | 1.75e-35 | 64 |
| neural plate | 1.75e-35 | 64 |
| presumptive neural plate | 1.75e-35 | 64 |
Showing 1 to 10 of 51 entries
