FFCP PHASE2:Hg19::chr1:156721427..156721445,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@HDGF |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_HDGF_5end |
| Coexpression cluster: | C3883_Reticulocytes_teratocarcinoma_Renal_transitionalcell_mesothelioma_Tracheal_Alveolar |
| Association with transcript: | -37bp_to_ENST00000537739_5end |
| EntrezGene: | HDGF |
| HGNC: | 4856 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@HDGF |
|---|
0
10
20
30
40
50
60
70
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 3.67e-29 | 253 |
| embryonic cell | 4.28e-23 | 250 |
| squamous epithelial cell | 1.69e-11 | 63 |
| mesodermal cell | 1.74e-11 | 121 |
| lining cell | 5.07e-09 | 58 |
| barrier cell | 5.07e-09 | 58 |
| meso-epithelial cell | 4.78e-07 | 45 |
| epithelial cell of nephron | 4.95e-07 | 15 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| trunk | 2.30e-09 | 199 |
| unilaminar epithelium | 8.09e-09 | 148 |
| endoderm-derived structure | 1.15e-08 | 160 |
| endoderm | 1.15e-08 | 160 |
| presumptive endoderm | 1.15e-08 | 160 |
| mesenchyme | 7.76e-08 | 160 |
| entire embryonic mesenchyme | 7.76e-08 | 160 |
| epithelial tube | 9.68e-08 | 117 |
| trunk region element | 2.09e-07 | 101 |
| digestive system | 2.95e-07 | 145 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 5.94e-29 | 235 |
| disease of cellular proliferation | 4.20e-28 | 239 |
| cell type cancer | 2.78e-17 | 143 |
| carcinoma | 5.41e-14 | 106 |
| organ system cancer | 1.26e-11 | 137 |
| hematologic cancer | 8.44e-09 | 51 |
| immune system cancer | 8.44e-09 | 51 |
| leukemia | 4.82e-08 | 39 |
Showing 1 to 8 of 8 entries
