FFCP PHASE2:Hg19::chr1:156084491..156084510,+
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| Short description: | p1@LMNA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_LMNA_5end |
| Coexpression cluster: | C1839_Mast_immature_Fibroblast_Mesenchymal_Hair_tenocyte_Keratocytes |
| Association with transcript: | 0bp_to_ENST00000368300, ENST00000469565, ENST00000470199, ENST00000478063, uc009wro.1_5end |
| EntrezGene: | LMNA |
| HGNC: | 6636 |
| UniProt: | P02545Q6UYC3 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p1@LMNA |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 6.38e-21 | 76 |
| mesodermal cell | 2.21e-16 | 121 |
| embryonic cell | 1.14e-12 | 250 |
| skin fibroblast | 4.99e-11 | 23 |
| muscle precursor cell | 6.29e-10 | 58 |
| myoblast | 6.29e-10 | 58 |
| multi-potent skeletal muscle stem cell | 6.29e-10 | 58 |
| muscle cell | 1.12e-09 | 55 |
| smooth muscle cell | 7.29e-09 | 43 |
| smooth muscle myoblast | 7.29e-09 | 43 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 7.61e-16 | 315 |
| mesoderm-derived structure | 7.61e-16 | 315 |
| presumptive mesoderm | 7.61e-16 | 315 |
| epithelial vesicle | 4.06e-15 | 78 |
| somite | 2.30e-13 | 71 |
| presomitic mesoderm | 2.30e-13 | 71 |
| presumptive segmental plate | 2.30e-13 | 71 |
| dermomyotome | 2.30e-13 | 71 |
| trunk paraxial mesoderm | 2.30e-13 | 71 |
| musculoskeletal system | 2.97e-13 | 167 |
Showing 1 to 10 of 44 entries
