FFCP PHASE1:Hg19::chr7:27153454..27153469,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@HOXA3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_HOXA3_5end |
| Coexpression cluster: | C2890_Smooth_glioma_clear_Renal_endometrial_mesothelioma_gastric |
| Association with transcript: | 0bp_to_ENST00000522456_5end |
| EntrezGene: | HOXA3 |
| HGNC: | 5104 |
| UniProt: | F2Z3A4 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@HOXA3 |
|---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.15e-17 | 253 |
| squamous epithelial cell | 2.71e-15 | 63 |
| mesodermal cell | 6.17e-13 | 121 |
| kidney tubule cell | 5.01e-11 | 10 |
| nephron tubule epithelial cell | 5.01e-11 | 10 |
| mesothelial cell | 1.12e-10 | 19 |
| lining cell | 1.33e-09 | 58 |
| barrier cell | 1.33e-09 | 58 |
| embryonic cell | 2.72e-09 | 250 |
| epithelial cell of nephron | 6.58e-09 | 15 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| trunk | 4.35e-18 | 199 |
| trunk region element | 4.35e-17 | 101 |
| epithelial tube | 1.44e-15 | 117 |
| subdivision of trunk | 4.14e-14 | 112 |
| abdominal segment of trunk | 3.16e-12 | 60 |
| abdomen | 3.16e-12 | 60 |
| nephron tubule epithelium | 5.01e-11 | 10 |
| anatomical conduit | 2.15e-10 | 240 |
| abdomen element | 2.33e-10 | 54 |
| abdominal segment element | 2.33e-10 | 54 |
Showing 1 to 10 of 48 entries
| Ontology term | p-value | n |
|---|---|---|
| cell type cancer | 3.06e-14 | 143 |
| carcinoma | 2.20e-13 | 106 |
| cancer | 5.69e-11 | 235 |
| disease of cellular proliferation | 3.15e-10 | 239 |
| squamous cell carcinoma | 1.14e-07 | 14 |
Showing 1 to 5 of 5 entries
