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EntrezGene:93708

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Symbol:Pcdhgc5
Description:protocadherin gamma subfamily C, 5
Synonyms:NA
Species:Mouse (Mus musculus)
Xrefs:
EntrezGene:93708
MGI:1935205
Ensembl:ENSMUSG00000023036
Associated motifs:NA
Transcripton Factor?: No

TSS regions


Mm9::chr18:37833957..37834019,+p2@Pcdhga11
p2@Pcdhga12
p2@Pcdhga3
p2@Pcdhga8
p2@Pcdhga9
p2@Pcdhgb6
p2@Pcdhgc3
p2@Pcdhgc4
p2@Pcdhgc5
Mm9::chr18:37885375..37885408,+p8@Pcdhga11
p8@Pcdhga12
p8@Pcdhga3
p8@Pcdhga8
p8@Pcdhga9
p8@Pcdhgb6
p8@Pcdhgc3
p8@Pcdhgc4
p8@Pcdhgc5
Mm9::chr18:37896551..37896612,+p5@Pcdhga11
p5@Pcdhga12
p5@Pcdhga3
p5@Pcdhga8
p5@Pcdhga9
p5@Pcdhgb6
p5@Pcdhgc3
p5@Pcdhgc4
p5@Pcdhgc5
Mm9::chr18:37901742..37901791,+p7@Pcdhga11
p7@Pcdhga12
p7@Pcdhga3
p7@Pcdhga8
p7@Pcdhga9
p7@Pcdhgb6
p7@Pcdhgc3
p7@Pcdhgc4
p7@Pcdhgc5
Mm9::chr18:37915372..37915421,+p4@Pcdhga11
p4@Pcdhga12
p4@Pcdhga3
p4@Pcdhga8
p4@Pcdhga9
p4@Pcdhgb6
p4@Pcdhgc3
p4@Pcdhgc4
p4@Pcdhgc5
Mm9::chr18:37925612..37925662,+p9@Pcdhga11
p9@Pcdhga12
p9@Pcdhga3
p9@Pcdhga8
p9@Pcdhga9
p9@Pcdhgb6
p9@Pcdhgc3
p9@Pcdhgc4
p9@Pcdhgc5
Mm9::chr18:37966043..37966107,+p1@Pcdhga11
p1@Pcdhga12
p1@Pcdhga3
p1@Pcdhga8
p1@Pcdhga9
p1@Pcdhgb6
p1@Pcdhgc3
p1@Pcdhgc4
p1@Pcdhgc5
Mm9::chr18:37975044..37975091,+p6@Pcdhga11
p6@Pcdhga12
p6@Pcdhga3
p6@Pcdhga8
p6@Pcdhga9
p6@Pcdhgb6
p6@Pcdhgc3
p6@Pcdhgc4
p6@Pcdhgc5
Mm9::chr18:37975098..37975121,+p10@Pcdhga11
p10@Pcdhga12
p10@Pcdhga3
p10@Pcdhga8
p10@Pcdhga9
p10@Pcdhgb6
p10@Pcdhgc3
p10@Pcdhgc4
p10@Pcdhgc5
Mm9::chr18:37979157..37979172,+p11@Pcdhga11
p11@Pcdhga12
p11@Pcdhga3
p11@Pcdhga8
p11@Pcdhga9
p11@Pcdhgb6
p11@Pcdhgc3
p11@Pcdhgc4
p11@Pcdhgc5
Mm9::chr18:37979197..37979224,+p3@Pcdhga11
p3@Pcdhga12
p3@Pcdhga3
p3@Pcdhga8
p3@Pcdhga9
p3@Pcdhgb6
p3@Pcdhgc3
p3@Pcdhgc4
p3@Pcdhgc5



View on UCSC genome browser


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TSS expression




Sample

p1@Pcdhgc5

p2@Pcdhgc5

p3@Pcdhgc5

p4@Pcdhgc5

p5@Pcdhgc5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.000.000.000.000.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.400.000.000.000.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.910.000.000.000.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.000.300.000.000.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.500.000.000.000.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.710.000.000.000.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.610.000.000.000.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.030.000.130.000.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.820.000.000.000.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.040.000.000.000.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.680.000.000.000.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.320.000.000.000.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.340.000.000.170.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.440.000.000.000.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.000.000.000.000.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.400.000.000.000.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.000.000.000.000.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.000.000.000.000.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.270.000.000.000.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.420.000.000.000.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A328.661.0214.370.431.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.990.000.000.000.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.520.000.000.000.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.400.000.000.000.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.750.000.000.000.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.570.000.000.000.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.720.000.000.000.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.720.000.000.000.00
Ileum epithelium, pool1.CNhs13199.10252-104B92.660.000.000.000.38
Ileum epithelium, pool2.CNhs13232.10253-104C12.020.000.000.000.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.770.220.000.000.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.000.000.640.000.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.000.000.620.000.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.000.000.000.000.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.180.000.000.291.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.830.000.000.000.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.430.200.000.000.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.000.000.000.000.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.000.000.000.000.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.520.000.000.000.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.590.000.000.000.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.000.000.000.000.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.000.000.000.000.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8237.190.3813.720.000.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9240.360.5115.410.000.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3145.190.3724.410.000.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7387.284.691.562.354.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2226.965.234.586.981.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8262.524.8321.757.473.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3209.214.2810.114.281.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C4154.963.645.321.963.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C4218.501.4410.064.310.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.170.170.000.000.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.180.000.000.000.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.690.000.000.000.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1179.572.8310.293.860.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1160.752.874.302.583.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5172.753.094.643.611.03
Mouse Granule cells, donor1.CNhs12131.11713-123C356.246.680.205.467.89
Mouse Granule cells, donor2.CNhs12357.11731-123E370.8810.580.006.885.82
Mouse Granule cells, donor3.CNhs12108.11636-122C751.974.440.003.178.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6230.084.4011.184.073.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1184.082.674.451.783.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C738.700.451.350.000.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E738.570.000.000.000.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D239.790.000.710.000.71
Mouse Microglia, donor1.CNhs12629.11718-123C8346.647.4928.761.803.30
Mouse Microglia, donor2.CNhs12634.11736-123E8473.369.9946.113.073.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D560.554.040.005.393.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F580.735.940.007.023.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D962.264.630.009.676.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F174.846.001.1410.577.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D579.739.941.337.0710.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D257.824.900.615.765.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F268.634.220.197.197.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D660.672.760.0011.037.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.442.204.403.308.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F357.593.9613.287.029.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D747.465.388.147.378.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D473.598.440.135.019.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F474.939.970.006.048.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D863.037.810.009.387.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E450.533.913.076.988.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.582.815.062.256.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I653.635.2012.535.659.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D667.1811.490.887.377.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F655.678.970.006.836.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E162.639.510.007.083.91
Mouse Schwann, donor1.CNhs12507.11728-123D9135.102.043.485.001.36
Mouse Schwann, donor2.CNhs12573.11746-123F9173.214.084.089.673.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G360.296.960.290.581.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.864.300.000.860.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.360.000.000.000.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.080.000.000.540.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.900.000.000.000.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.790.000.000.000.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.990.282.530.280.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7156.280.343.580.170.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3120.280.002.600.260.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8125.440.002.470.710.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G642.394.510.005.492.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1151.430.001.280.000.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8155.430.002.550.000.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6156.430.000.007.110.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.020.430.001.300.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.680.250.002.280.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.690.510.000.000.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.220.111.710.110.11
accessory axillary lymph node, adult.CNhs10475.1063-29H99.321.810.001.041.04
adrenal gland, adult.CNhs10508.49-24D761.604.905.051.631.93
adrenal gland, embryo E14.CNhs11038.406-44C547.885.900.353.641.21
adrenal gland, embryo E16.CNhs11004.1254-43D643.844.870.302.743.35
adrenal gland, embryo E17.CNhs11043.1263-45I135.282.540.232.310.92
adrenal gland, embryo E18.CNhs11026.1262-18F531.053.170.751.810.90
adrenal gland, neonate N00.CNhs11191.1311-23C135.863.760.473.412.23
adrenal gland, neonate N25.CNhs11223.1377-27I369.872.513.391.132.14
amnion, adult pregnant day17.5.CNhs10488.583-22A812.611.480.490.990.25
aorta, adult.CNhs10498.46-23H1100.793.901.742.171.59
bone (os femoris), adult.CNhs10483.56-12G212.380.000.000.000.00
bone (os femoris), neonate N02.CNhs11227.1985-43F558.073.881.292.101.62
bone (os femoris), neonate N16.CNhs11225.1525-43A631.362.651.101.330.44
bone (os femoris), neonate N20.CNhs11195.1350-25C342.672.911.941.940.97
cecum, adult.CNhs10467.37-13H414.910.000.000.001.86
cerebellum, adult.CNhs10494.15-8B2102.1819.915.8618.7410.83
cerebellum, neonate N30.CNhs11135.1395-42I2113.1015.925.4518.435.66
colon, adult.CNhs10468.36-18H78.941.280.000.000.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.120.000.000.120.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.000.000.000.000.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.400.000.000.000.00
corpora quadrigemina, adult.CNhs10501.16-22A446.2910.048.247.648.09
corpus striatum, adult.CNhs10487.19-21D844.3818.3050.3313.7312.81
corpus striatum, neonate N00.CNhs11226.630-43F169.8618.859.1719.486.28
cortex, adult.CNhs10473.12-14D543.9815.99114.3818.0811.30
cortex, neonate N30.CNhs11107.1392-42F248.5912.27114.0512.795.88
diencephalon, adult.CNhs10482.20-12F255.4813.3024.737.906.65
diencephalon, neonate N30.CNhs11201.1388-42B250.2910.3846.569.736.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B159.686.620.103.162.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A235.832.611.241.991.74
epididymis, adult.CNhs10490.58-23B28.341.010.000.760.25
eyeball, adult.CNhs10484.31-12G423.364.420.632.952.74
eyeball, embryo E12.CNhs11016.345-16C642.816.900.005.073.51
eyeball, embryo E14.CNhs10521.399-16E239.086.440.004.143.22
eyeball, embryo E15.CNhs10593.426-16C942.857.020.004.141.80
eyeball, embryo E17.CNhs11023.1261-18D441.448.890.005.733.62
eyeball, neonate N00.CNhs11207.633-15C642.1810.950.146.404.01
eyeball, neonate N01.CNhs11140.1532-43E745.2211.400.266.022.69
eyeball, neonate N02.CNhs11205.1551-44G847.608.150.005.532.53
eyeball, neonate N16.CNhs11188.777-19A237.7712.420.523.888.28
forelimb, embryo E11.CNhs10596.335-25E266.617.760.004.962.37
forelimb, embryo E12.CNhs10600.359-14H273.377.750.193.213.40
forelimb, embryo E13.CNhs10589.384-1E278.658.450.003.524.40
forelimb, embryo E14.CNhs10577.413-26A865.545.040.002.191.53
forelimb, embryo E15.CNhs11007.437-20E765.628.620.007.510.83
forelimb, embryo E17.CNhs10598.1517-43C458.517.310.002.791.74
forelimb, embryo E18.CNhs11008.1520-43B560.915.140.002.880.82
gonad, embryo E13.CNhs11044.1564-45I645.786.770.001.991.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.400.000.000.000.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.510.000.000.000.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.560.000.000.000.00
heart, embryo E11.CNhs10586.331-24E960.274.970.412.902.90
heart, embryo E12.CNhs11015.353-12F550.195.631.172.110.94
heart, embryo E13.CNhs11013.376-3I951.145.580.183.602.88
heart, embryo E14.CNhs10597.403-26D460.137.580.242.602.84
heart, embryo E15.CNhs11017.431-16C851.365.510.004.130.98
heart, embryo E16.CNhs11021.457-17C651.685.860.002.622.16
heart, embryo E17.CNhs11025.479-18E540.464.880.234.191.16
heart, embryo E18.CNhs11030.1283-20G355.534.560.002.151.34
heart, neonate N00.CNhs11213.639-21E333.985.490.233.501.63
heart, neonate N03.CNhs11221.1349-25I241.965.100.003.621.65
heart, neonate N10.CNhs11118.749-24G138.584.760.161.481.48
heart, neonate N16.CNhs11209.782-15G138.263.160.241.460.81
heart, neonate N20.CNhs11127.821-26I635.384.820.152.191.17
heart, neonate N25.CNhs11196.1351-25D341.713.730.661.540.44
heart, neonate N30.CNhs11202.1390-42D236.774.290.271.071.07
hippocampus, adult.CNhs10478.13-16E849.8421.2478.4415.7712.20
hippocampus, neonate N00.CNhs11228.627-43G180.3724.591.6521.616.59
intestinal mucosa, adult.CNhs10506.860-29I31.980.330.000.330.00
intestine, adult.CNhs10496.178-9A36.880.000.000.530.00
intestine, embryo E12.CNhs11019.1251-16I545.005.330.002.134.27
intestine, embryo E13.CNhs11010.381-16D556.205.810.002.322.09
intestine, embryo E15.CNhs10602.976-16D844.332.710.132.711.68
intestine, embryo E16.CNhs10585.463-22H423.603.830.002.222.42
intestine, embryo E17.CNhs10582.482-18D330.244.450.001.112.00
intestine, embryo E18.CNhs10526.1289-20F724.542.280.191.140.76
intestine, neonate N00.CNhs11126.644-26D115.661.420.000.000.00
intestine, neonate N01.CNhs11192.1322-23E919.431.650.002.311.15
intestine, neonate N06.CNhs11102.688-20B820.362.260.001.761.01
intestine, neonate N07.CNhs11095.720-20F219.904.380.000.201.99
intestine, neonate N10.CNhs11098.755-23A527.293.120.000.781.56
intestine, neonate N20.CNhs11187.827-18D115.282.700.000.900.00
intestine, neonate N25.CNhs11121.1352-25E314.911.080.220.650.65
intestine, neonate N30.CNhs11131.1384-42G114.340.400.000.400.80
kidney, embryo E14.CNhs10606.411-4I947.424.360.001.901.33
kidney, embryo E15.CNhs10997.434-16F842.274.910.003.661.83
kidney, embryo E16.CNhs10584.464-22A542.833.380.001.133.38
kidney, embryo E17.CNhs11028.483-18I241.755.090.412.041.43
kidney, embryo E18.CNhs11001.1288-20C742.864.460.001.750.78
kidney, neonate N00.CNhs11214.646-21G739.004.560.001.821.05
kidney, neonate N10.CNhs11206.758-6D547.495.000.061.581.52
kidney, neonate N20.CNhs11113.832-19I120.811.620.001.180.74
kidney, neonate N25.CNhs11122.1353-25F320.252.040.001.570.63
kidney, neonate N30.CNhs11203.1385-42H118.881.480.000.860.99
liver, adult pregnant day01.CNhs10466.508-5B29.780.300.000.000.30
liver, embryo E12.CNhs10601.355-15F813.850.500.000.500.67
liver, embryo E13.CNhs10524.378-3H613.761.380.200.980.59
liver, embryo E14.CNhs10594.409-16E16.520.000.000.000.45
liver, embryo E15.CNhs10520.433-16D79.740.610.000.410.61
liver, embryo E16.CNhs10523.462-17F512.300.720.000.480.00
liver, embryo E17.CNhs10510.481-18A312.731.530.000.000.51
liver, embryo E18.CNhs10579.499-43G414.381.440.290.290.00
liver, neonate N00.CNhs11117.641-24F414.430.490.000.000.16
liver, neonate N03.CNhs11123.1345-25G211.810.550.000.000.27
liver, neonate N06.CNhs11101.684-20A818.691.440.001.440.00
liver, neonate N07.CNhs11103.716-20H226.421.120.741.120.00
liver, neonate N10.CNhs11115.751-24B917.471.250.310.620.31
liver, neonate N20.CNhs11220.823-25A314.140.760.000.000.76
liver, neonate N25.CNhs11198.1368-26H110.410.540.000.000.36
liver, neonate N30.CNhs11106.1382-42D18.200.960.480.480.48
lung, adult.CNhs10474.28-22B176.123.700.183.512.96
lung, embryo E12.CNhs10522.354-16G265.003.980.002.083.60
lung, embryo E14.CNhs10604.404-26F885.886.520.003.102.77
lung, embryo E15.CNhs11020.432-17C581.995.090.002.213.23
lung, embryo E16.CNhs10998.458-17B684.724.460.001.641.64
lung, embryo E17.CNhs10605.480-44A696.154.520.002.852.01
lung, embryo E18.CNhs10583.1287-20I6101.179.280.001.434.28
lung, neonate N00.CNhs11224.640-42C681.184.880.781.952.34
lung, neonate N06.CNhs11212.683-20E5156.377.250.165.362.68
lung, neonate N07.CNhs11111.715-19A3155.037.090.224.652.88
lung, neonate N10.CNhs11219.750-23E6155.956.060.642.712.55
lung, neonate N20.CNhs11109.822-18A498.485.240.983.111.64
lung, neonate N25.CNhs11119.1359-25C7104.304.490.864.141.55
lung, neonate N30.CNhs11133.1394-42H294.603.470.143.042.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.510.000.000.000.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.180.000.000.000.00
mammary gland, adult lactating day02.CNhs10480.595-22B616.231.970.000.490.98
mammary gland, adult pregnant day19.CNhs10476.588-5H224.561.660.551.100.55
medulla oblongata, adult.CNhs10477.17-12C239.018.354.829.157.87
medulla oblongata, neonate N30.CNhs11200.1396-42A338.567.383.999.145.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7101.481.480.490.000.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C238.633.280.251.261.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1118.002.210.320.952.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2120.262.730.001.171.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3162.001.940.000.652.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7159.153.350.000.482.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8177.122.450.000.672.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9165.882.830.000.001.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4174.073.240.001.622.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5141.742.630.881.462.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6162.863.160.791.980.79
olfactory brain, adult.CNhs10489.18-22I962.0222.4978.4018.969.64
ovary, adult.CNhs10507.91-2I752.092.410.851.851.14
ovary, embryo E18.CNhs11040.505-44H779.604.810.001.782.14
ovary, neonate N00.CNhs11217.1299-22I462.876.680.002.281.79
oviduct, adult pregnant day01.CNhs10500.988-6G646.524.450.001.981.81
pancreas, adult.CNhs10486.34-16E47.961.330.000.000.00
pancreas, embryo E14.CNhs11012.405-44F429.623.640.001.701.46
pancreas, embryo E15.CNhs11042.1556-45F226.911.510.000.602.42
pancreas, embryo E16.CNhs11003.460-26E516.032.260.000.941.13
pancreas, embryo E17.CNhs10599.1558-45G332.191.480.001.182.66
pancreas, embryo E18.CNhs10580.1535-43I728.283.380.000.922.46
pancreas, neonate N00.CNhs11105.645-26G926.621.030.261.550.78
pancreas, neonate N01.CNhs11138.1531-43D725.081.820.000.730.73
pancreas, neonate N02.CNhs11139.1539-43D825.314.280.001.072.14
pancreas, neonate N16.CNhs11136.787-43B621.172.840.000.000.95
pancreas, neonate N25.CNhs11094.1555-45E211.600.000.000.000.00
pancreas, neonate N30.CNhs11182.1548-44H515.470.000.000.000.00
pituitary gland, adult.CNhs10493.21-1G844.264.773.744.437.49
pituitary gland, embryo E12.CNhs11018.346-16E652.229.180.003.603.06
pituitary gland, embryo E13.CNhs11009.370-44C767.918.930.525.303.10
pituitary gland, embryo E14.CNhs11037.398-44A558.307.290.005.143.64
pituitary gland, embryo E15.CNhs10592.427-16B972.3512.950.003.555.50
pituitary gland, embryo E16.CNhs11036.449-43F684.739.990.186.065.53
pituitary gland, embryo E17.CNhs11039.1265-44F567.6311.680.165.594.77
pituitary gland, neonate N00.CNhs11190.1308-22E974.2910.660.307.927.00
placenta, adult pregnant day10.CNhs10472.539-13I726.051.412.351.410.47
placenta, adult pregnant day17.CNhs10464.577-18G317.790.640.423.390.85
prostate, adult.CNhs10470.859-1F86.620.440.000.440.00
skin, adult.CNhs10492.30-1C334.633.130.001.321.48
skin, neonate N00.CNhs11124.650-25G446.184.680.322.911.45
skin, neonate N03.CNhs11215.662-22H344.513.440.062.831.15
skin, neonate N06.CNhs11097.693-20I539.272.510.001.551.31
skin, neonate N10.CNhs11108.762-6C427.743.780.161.811.48
small intestine, neonate N16.CNhs11114.790-21I120.990.580.290.580.29
spinal cord, adult.CNhs10505.24-13C945.619.837.238.537.79
spleen, adult.CNhs10465.25-2G23.590.000.000.000.00
spleen, embryo E16.CNhs11035.461-43C156.144.130.211.443.10
spleen, embryo E18.CNhs11011.1271-21F230.374.440.000.740.37
spleen, neonate N10.CNhs11116.752-24D19.040.750.000.000.38
spleen, neonate N20.CNhs11112.824-19H14.510.680.000.270.00
spleen, neonate N25.CNhs11099.1354-25G34.350.230.000.230.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.510.170.000.170.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.680.000.000.000.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.110.000.000.000.28
stomach, adult.CNhs10503.33-1H69.551.910.000.951.91
stomach, embryo E12.CNhs10588.356-43E349.826.800.472.371.42
stomach, embryo E15.CNhs10603.1252-16G845.547.120.202.642.24
stomach, embryo E16.CNhs11022.459-17D436.514.320.002.701.62
stomach, embryo E17.CNhs11006.1035-18D537.223.970.002.091.05
stomach, embryo E18.CNhs10999.1286-20C630.354.800.222.181.75
stomach, neonate N03.CNhs11193.1340-24B831.423.780.002.161.08
stomach, neonate N07.CNhs11210.718-18A939.765.040.082.152.07
stomach, neonate N25.CNhs11104.1355-25E426.701.830.262.881.83
stomach, neonate N30.CNhs11134.1386-42I114.391.300.391.170.91
submandibular gland, adult.CNhs10469.59-29C116.150.620.001.240.00
testis, adult.CNhs10504.57-7G51.130.000.000.000.00
testis, embryo E13.CNhs11031.389-23F565.346.880.452.091.64
testis, embryo E15.CNhs11034.443-27C555.264.630.171.322.32
testis, embryo E16.CNhs11033.470-26G552.895.830.192.332.33
testis, embryo E17.CNhs11029.486-18I555.417.750.001.942.58
testis, embryo E18.CNhs11027.503-18G547.486.080.171.691.69
testis, neonate N00.CNhs11189.1300-22B760.919.860.123.172.93
testis, neonate N07.CNhs11222.726-26I435.552.210.131.170.91
testis, neonate N10.CNhs11204.763-44D927.682.200.001.051.15
testis, neonate N20.CNhs11110.839-18H38.940.480.000.000.48
testis, neonate N30.CNhs11130.1391-42E211.810.860.000.000.00
thymus, adult.CNhs10471.38-12B58.850.630.000.000.63
thymus, embryo E14.CNhs11041.402-44I432.444.050.001.221.42
thymus, embryo E15.CNhs11005.430-45I226.813.390.001.750.51
thymus, embryo E16.CNhs11002.456-26C513.642.210.000.521.17
thymus, embryo E17.CNhs10581.478-18C111.991.250.000.360.18
thymus, embryo E18.CNhs10595.1273-19G413.310.990.000.990.79
thymus, neonate N02.CNhs11181.1541-43F89.620.480.120.360.36
thymus, neonate N03.CNhs11137.2104-43C77.090.000.150.300.44
thymus, neonate N06.CNhs11197.681-26C47.670.300.000.100.10
thymus, neonate N07.CNhs11211.713-19D37.620.530.000.080.08
thymus, neonate N10.CNhs11194.748-24E44.230.100.100.200.00
thymus, neonate N20.CNhs11186.820-7A24.480.390.000.190.39
thymus, neonate N25.CNhs11125.1362-25G72.980.100.100.100.19
thymus, neonate N30.CNhs11132.1393-42G24.210.350.120.350.00
tongue, adult.CNhs10499.32-1B434.923.170.001.810.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.660.000.440.000.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F715.880.181.880.090.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G514.940.502.180.000.00
urinary bladder, adult.CNhs10481.879-12E441.155.221.352.133.67
uterus, adult pregnant day19.CNhs10497.590-15F527.963.380.381.690.56
uterus, adult.CNhs10509.92-27E535.533.850.181.650.92
vagina, adult.CNhs10502.89-27D533.443.000.431.501.71
vesicular gland, adult.CNhs10491.51-27F89.032.010.002.511.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A154.7824.8565.5114.1212.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A252.4828.0868.1321.175.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A358.4420.6264.1622.928.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D751.5625.2697.1018.564.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A445.9018.5076.7316.448.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A551.3725.6878.5611.333.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.2514.1872.2311.487.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A741.8810.3686.0117.1110.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.5212.6968.8816.777.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A941.4214.5083.3616.057.25
whole body, embryo E11.CNhs11014.324-5I820.342.080.001.560.73
whole body, embryo E12.CNhs10587.857-27C988.5812.370.004.795.59
whole body, embryo E13.CNhs10512.372-23H252.939.390.173.763.76
whole body, embryo E14.5.CNhs10578.420-27D247.416.560.003.162.19
whole body, embryo E14.CNhs10519.395-14B120.962.930.001.470.84
whole body, embryo E16.CNhs10514.453-14F225.372.570.372.210.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G545.347.330.222.891.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G544.715.980.003.091.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G541.724.810.002.252.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G552.816.570.514.301.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G547.157.860.253.042.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G548.678.680.572.451.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G545.146.550.194.032.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G546.037.040.133.652.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G546.066.030.293.271.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G550.967.620.004.293.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G544.155.680.354.062.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G544.956.370.193.281.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G544.094.120.001.650.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G550.196.480.003.832.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G546.977.200.342.741.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G543.845.500.353.732.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G547.216.910.004.052.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G551.897.120.002.182.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G549.036.590.473.391.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G544.006.940.423.551.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G544.456.400.003.662.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.515.260.001.323.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G549.705.700.142.851.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G543.774.490.003.933.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G547.104.630.242.491.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G547.584.240.103.741.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G542.566.960.004.910.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G546.486.200.152.941.24
whole body, embryo E17.5.CNhs10513.490-9F951.318.100.193.471.16
whole body, embryo E17.CNhs10517.475-3I576.6911.740.008.994.75
whole body, embryo E18.CNhs10516.493-3B355.685.850.704.212.34
whole body, neonate N00.CNhs10525.657-19C252.007.740.213.653.22
whole body, neonate N01.CNhs10576.659-23C653.375.160.382.682.68
whole body, neonate N06.CNhs10515.692-21D159.342.430.001.321.10
whole body, neonate N10.CNhs10518.761-6B455.183.940.231.851.62






  • Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data


No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse


GeneID:93708
LocusTag:-
chromosome:18
map location:18 B3, 18, 18 B3;;18
type of gene:protein-coding
Symbol from
nomenclature authority:
Pcdhgc5
Full name from
nomenclature authority:
protocadherin gamma subfamily C, 5
Nomenclature status:O
Other designations:-
Modification date:16.11.2011