UBERON:0005721
From FANTOM5_SSTAR
| Name: | pronephric mesoderm | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: |
"pronephric anlage" RELATED [XAO:0000264] "pronephric bulge" RELATED [XAO:0000264] "pronephric mesenchyme" RELATED [XAO:0000264] "pronephric primordium" RELATED [XAO:0000264] | ||
| Comments: | the intermediate mesoderm of the chick embryo acquires its ability to form kidneys through its interactions with the paraxial mesoderm [ISBN:9780878932504 "Developmental Biology", PMID:10720431 "Signals from trunk paraxial mesoderm induce pronephros formation in chick intermediate mesoderm"]. These interactions induce the expression of TFs including Lim1, Pax2 and Pax6 that cause the intermediate mesoderm to form the kidney |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000926(mesoderm),UBERON:0004120(mesoderm-derived structure) |
|---|---|
| develops_from: | UBERON:0007297(presumptive pronephric mesoderm) |
| part_of: | UBERON:0003064(intermediate mesoderm) |
Children
| develops from: | UBERON:0002120 (pronephros),UBERON:0003060 (pronephric duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005721 (pronephric mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_5b4f10e1e871e010ff8b4325fc13cddc | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_5b4f10e1e871e010ff8b4325fc13cddc | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_5b4f10e1e871e010ff8b4325fc13cddc | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_5b4f10e1e871e010ff8b4325fc13cddc | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_5b4f10e1e871e010ff8b4325fc13cddc | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_5b4f10e1e871e010ff8b4325fc13cddc | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_5b4f10e1e871e010ff8b4325fc13cddc | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_5b4f10e1e871e010ff8b4325fc13cddc | p4@Defb42 |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_68c9c90a59166e7c7e8ce48d580d375c | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_68c9c90a59166e7c7e8ce48d580d375c | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_1b592bcb80aaa8c83d159ca2476524ae | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_1b592bcb80aaa8c83d159ca2476524ae | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_f665ec65cf1dea324fcbc7a9bfae1e95 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_f665ec65cf1dea324fcbc7a9bfae1e95 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_f665ec65cf1dea324fcbc7a9bfae1e95 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_f665ec65cf1dea324fcbc7a9bfae1e95 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_f665ec65cf1dea324fcbc7a9bfae1e95 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_f665ec65cf1dea324fcbc7a9bfae1e95 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_f665ec65cf1dea324fcbc7a9bfae1e95 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_f665ec65cf1dea324fcbc7a9bfae1e95 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_f665ec65cf1dea324fcbc7a9bfae1e95 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_f665ec65cf1dea324fcbc7a9bfae1e95 | p4@Cyb561 |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_5c9c897ce680f33de396c5ef1c1a8ca6 | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_5c9c897ce680f33de396c5ef1c1a8ca6 | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_5c9c897ce680f33de396c5ef1c1a8ca6 | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_5c9c897ce680f33de396c5ef1c1a8ca6 | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_5c9c897ce680f33de396c5ef1c1a8ca6 | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_5c9c897ce680f33de396c5ef1c1a8ca6 | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_5c9c897ce680f33de396c5ef1c1a8ca6 | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_5c9c897ce680f33de396c5ef1c1a8ca6 | p@chr9:26611246..26611253, - |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_a87d0bddc857d252f012012cedd7c844 | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_a87d0bddc857d252f012012cedd7c844 | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_79579161d4c4b30afc39427ef7e168db | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_79579161d4c4b30afc39427ef7e168db | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_79579161d4c4b30afc39427ef7e168db | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_79579161d4c4b30afc39427ef7e168db | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_79579161d4c4b30afc39427ef7e168db | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_79579161d4c4b30afc39427ef7e168db | p@chr14:68644730..68644737, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378296..21378303,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr13:21378296..21378303, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:152290340..152290344,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p2@Defb23 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:152388977..152388983,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr2:152388977..152388983, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:75329148..75329155,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr15:75329148..75329155, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr6:49817766..49817772,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr6:49817766..49817772, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr8:23045782..23045791, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p3@9230110F15Rik |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:167688595..167688624,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr2:167688595..167688624, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:89597818..89597827,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr1:89597818..89597827, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:59845404..59845416,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr11:59845404..59845416, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:85390145..85390153,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr10:85390145..85390153, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379098..21379104,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr13:21379098..21379104, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:113585667..113585673,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr8:113585667..113585673, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr10:91753336..91753348,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr10:91753336..91753348, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:25563187..25563205,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr7:25563187..25563205, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:88272459..88272484,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr5:88272459..88272484, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr2:167688595..167688624, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:96140694..96140720,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr11:96140694..96140720, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:124447371..124447383,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr5:124447371..124447383, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:59845376..59845393,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr11:59845376..59845393, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21385325..21385329,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr13:21385325..21385329, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chrX:130496166..130496188, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:73221062..73221084,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr17:73221062..73221084, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:51677141..51677148,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p7@Rnase12 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:110773580..110773589,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr5:110773580..110773589, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:172632171..172632178,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr2:172632171..172632178, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:87922778..87922788,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr1:87922778..87922788, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:90155707..90155720,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr1:90155707..90155720, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:152388977..152388983,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr2:152388977..152388983, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:46041606..46041640,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr13:46041606..46041640, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:137325863..137325870,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p15@Alpl |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:156048695..156048707,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr1:156048695..156048707, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr10:127470322..127470326,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr10:127470322..127470326, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:23308182..23308185,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr16:23308182..23308185, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:69116075..69116107,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr14:69116075..69116107, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr9:70779586..70779596, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr6:49817766..49817772, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr3:103650758..103650778,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr3:103650758..103650778, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:19141447..19141469,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr8:19141447..19141469, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:24865194..24865204,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr17:24865194..24865204, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr18:44264128..44264135,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p5@Spink12 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:120078716..120078763,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr5:120078716..120078763, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:31379454..31379466,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr5:31379454..31379466, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21385325..21385329,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr13:21385325..21385329, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:116901540..116901549,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p4@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:77645280..77645295,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr5:77645280..77645295, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:164479340..164479350,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr2:164479340..164479350, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:155738967..155738974,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr1:155738967..155738974, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:28323634..28323657,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr16:28323634..28323657, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26731771..26731780,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr9:26731771..26731780, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr19:17585885..17585901,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr19:17585885..17585901, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chrX:75798132..75798152, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr12:114385720..114385732, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:152302813..152302821,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p3@Defb20 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:23308115..23308126,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr16:23308115..23308126, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:101958844..101958851,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr11:101958844..101958851, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:25349488..25349492,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p6@Lcn12 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr18:44319583..44319592,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr18:44319583..44319592, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:53955299..53955306,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chr11:53955299..53955306, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:103276578..103276585,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p@chrX:103276578..103276585, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35715997..35716008,+#_a36a387a3a10bbdf54775f8b8ef579b0 | p1@9230113P08Rik |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26785438..26785446,-#_a36a387a3a10bbdf54775f8b8ef579b0 | p3@Acad8 |
