Personal tools

UBERON:0007297

From FANTOM5_SSTAR

Revision as of 11:43, 12 September 2014 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:presumptive pronephric mesoderm
Xrefs:
links:

EFO:0003619
TAO:0001070

ZFA:0001070
Synonyms: "nephron primordium" EXACT [ZFA:0001070]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0006598(presumptive structure)



Children

develops from:UBERON:0005721 (pronephric mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007297 (presumptive pronephric mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
4.54e-44FFCP PHASE2:Mm9::chr8:25706249..25706254,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:25706249..25706254, +
4.54e-44FFCP PHASE2:Mm9::chr13:21379430..21379437,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379430..21379437, -
4.54e-44FFCP PHASE1:Mm9::chr9:42151966..42151976,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p9@Tecta
4.54e-44FFCP PHASE2:Mm9::chr15:54678902..54678911,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:54678902..54678911, -
4.54e-44FFCP PHASE2:Mm9::chr2:164479326..164479336,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:164479326..164479336, +
4.54e-44FFCP PHASE1:Mm9::chr11:34107586..34107593,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:34107586..34107593, -
4.54e-44FFCP PHASE2:Mm9::chrX:156776465..156776473,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:156776465..156776473, -
4.54e-44FFCP PHASE1:Mm9::chrX:50280152..50280179,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:50280152..50280179, +
4.54e-44FFCP PHASE2:Mm9::chr5:110773718..110773729,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:110773718..110773729, +
4.54e-44FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:75329148..75329155, +
4.54e-44FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:26688157..26688159, -
4.54e-44FFCP PHASE1:Mm9::chr9:26785438..26785446,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Acad8
4.54e-44FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:35930667..35930691, +
4.54e-44FFCP PHASE1:Mm9::chr19:17591760..17591765,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr19:17591760..17591765, +
4.54e-44FFCP PHASE1:Mm9::chr12:16663110..16663116,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Ntsr2
4.54e-44FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:90155722..90155743, +
4.54e-44FFCP PHASE2:Mm9::chr13:21378927..21378932,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21378927..21378932, -
4.54e-44FFCP PHASE2:Mm9::chr12:16663110..16663116,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Ntsr2
4.54e-44FFCP PHASE2:Mm9::chr11:17224952..17224968,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:17224952..17224968, +
4.54e-44FFCP PHASE2:Mm9::chr4:138824620..138824627,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr4:138824620..138824627, +
4.54e-44FFCP PHASE1:Mm9::chr8:19141482..19141496,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:19141482..19141496, +
4.54e-44FFCP PHASE2:Mm9::chr12:110131571..110131579,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p15@Wars
4.54e-44FFCP PHASE1:Mm9::chr5:31379454..31379466,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379454..31379466, +
4.54e-44FFCP PHASE2:Mm9::chr13:21379306..21379315,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379306..21379315, -
4.54e-44FFCP PHASE1:Mm9::chr2:152302836..152302841,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p6@Defb20
4.54e-44FFCP PHASE1:Mm9::chr17:14306714..14306740,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr17:14306714..14306740, +
4.54e-44FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr12:103896072..103896081, -
4.54e-44FFCP PHASE2:Mm9::chrX:75798157..75798162,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:75798157..75798162, -
4.54e-44FFCP PHASE2:Mm9::chrX:130496372..130496393,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:130496372..130496393, -
4.54e-44FFCP PHASE1:Mm9::chr1:90155951..90155962,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:90155951..90155962, +
4.54e-44FFCP PHASE1:Mm9::chr1:155697874..155697885,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:155697874..155697885, -
4.54e-44FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379430..21379437, -
4.54e-44FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr16:23308182..23308185, +
4.54e-44FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:70761931..70761971, +
4.54e-44FFCP PHASE1:Mm9::chr9:26719400..26719404,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:26719400..26719404, -
4.54e-44FFCP PHASE2:Mm9::chr5:77645280..77645295,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:77645280..77645295, -
4.54e-44FFCP PHASE2:Mm9::chr8:96014490..96014496,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:96014490..96014496, +
4.54e-44FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p11@Wars
4.54e-44FFCP PHASE2:Mm9::chr1:89597818..89597827,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:89597818..89597827, +
4.54e-44FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:126591032..126591039, +
4.54e-44FFCP PHASE2:Mm9::chr11:116901629..116901639,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@uc007mmw.1
4.54e-44FFCP PHASE1:Mm9::chr4:138824620..138824627,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr4:138824620..138824627, +
4.54e-44FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr16:22547027..22547063, +
4.54e-44FFCP PHASE1:Mm9::chr16:92995710..92995753,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr16:92995710..92995753, +
4.54e-44FFCP PHASE1:Mm9::chr15:75304916..75304925,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:75304916..75304925, +
4.54e-44FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p2@ENSMUST00000152401
4.54e-44FFCP PHASE2:Mm9::chr9:42151966..42151976,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p9@Tecta
4.54e-44FFCP PHASE2:Mm9::chr2:148676859..148676866,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p5@9230104L09Rik
4.54e-44FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:89597660..89597668, +
4.54e-44FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:83143938..83143953, -
4.54e-44FFCP PHASE1:Mm9::chr14:63611303..63611312,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr14:63611303..63611312, +
4.54e-44FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p4@Bpi
4.54e-44FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:36016859..36016897, +
4.54e-44FFCP PHASE2:Mm9::chr11:101958855..101958871,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:101958855..101958871, -
4.54e-44FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:100350777..100350782, +
4.54e-44FFCP PHASE1:Mm9::chrX:12571771..12571780,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:12571771..12571780, -
4.54e-44FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:160573108..160573123, +
4.54e-44FFCP PHASE2:Mm9::chr8:23045782..23045791,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:23045782..23045791, +
4.54e-44FFCP PHASE2:Mm9::chr11:34107586..34107593,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:34107586..34107593, -
4.54e-44FFCP PHASE2:Mm9::chr13:21379159..21379162,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379159..21379162, -
4.54e-44FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379845..31379855, +
4.54e-44FFCP PHASE2:Mm9::chr9:34813361..34813403,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:34813361..34813403, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0007297&oldid=3274575"