FFCP PHASE2:Hg19::chr19:54372639..54372646,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:91663 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7544 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=91663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7544 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96S97 | ||
|association_with_transcript=-13bp_to_ENST00000391769,NM_001020821,uc002qco.2_5end | |association_with_transcript=-13bp_to_ENST00000391769,NM_001020821,uc002qco.2_5end | ||
|cluster_id=chr19:54372639..54372646,+ | |cluster_id=chr19:54372639..54372646,+ | ||
Latest revision as of 19:56, 19 September 2015
| Short description: | p24@MYADM |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_24_at_MYADM_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -13bp_to_ENST00000391769, NM_001020821, uc002qco.2_5end |
| EntrezGene: | MYADM |
| HGNC: | 7544 |
| UniProt: | Q96S97 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p24@MYADM |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell of sinusoid | 9.21e-09 | 2 |
| endothelial cell of hepatic sinusoid | 9.21e-09 | 2 |
| smooth muscle cell of the umbilical artery | 2.14e-08 | 4 |
| glomerular cell | 2.77e-08 | 7 |
| kidney corpuscule cell | 2.77e-08 | 7 |
| glomerular endothelial cell | 3.86e-07 | 5 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| hepatic sinusoid | 9.21e-09 | 2 |
| abdomen blood vessel | 9.21e-09 | 2 |
| sinusoid | 9.21e-09 | 2 |
| abdominal segment blood vessel | 9.21e-09 | 2 |
| trunk blood vessel | 1.48e-08 | 7 |
| umbilical artery | 2.14e-08 | 4 |
| primitive nephron | 2.77e-08 | 7 |
| renal glomerulus | 2.77e-08 | 7 |
| renal corpuscle | 2.77e-08 | 7 |
| glomerular capsule | 2.77e-08 | 7 |
Showing 1 to 10 of 23 entries
