FFCP PHASE2:Hg19::chr15:89346682..89346691,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:176 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:319 |TSSclassif...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=319 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P16112,E7EX88,E7ENV9,Q6PID9 | ||
|association_with_transcript=8bp_to_ENST00000268134,ENST00000439576,NM_001135,NM_013227,uc002bmx.2,uc002bna.2,uc010upo.1,uc010upp.1_5end | |association_with_transcript=8bp_to_ENST00000268134,ENST00000439576,NM_001135,NM_013227,uc002bmx.2,uc002bna.2,uc010upo.1,uc010upp.1_5end | ||
|cluster_id=chr15:89346682..89346691,+ | |cluster_id=chr15:89346682..89346691,+ |
Latest revision as of 15:43, 19 September 2015
Short description: | p4@ACAN |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACAN_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 8bp_to_ENST00000268134, ENST00000439576, NM_001135, NM_013227, uc002bmx.2, uc002bna.2, uc010upo.1, uc010upp.1_5end |
EntrezGene: | ACAN |
HGNC: | 319 |
UniProt: | P16112E7EX88E7ENV9Q6PID9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@ACAN |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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GAG secreting cell | 8.60e-25 | 9 |
carbohydrate secreting cell | 8.60e-25 | 9 |
chondroblast | 1.50e-19 | 6 |
chondrocyte | 1.50e-19 | 6 |
skin fibroblast | 9.17e-17 | 23 |
fibroblast | 7.12e-16 | 76 |
extracellular matrix secreting cell | 1.87e-14 | 15 |
stromal cell | 1.00e-11 | 28 |
synovial cell | 3.42e-07 | 3 |
fibroblast of periodontium | 3.50e-07 | 6 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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integument | 8.31e-13 | 46 |
integumental system | 8.31e-13 | 46 |
skin of body | 2.13e-12 | 41 |
surface structure | 1.50e-08 | 99 |
stratified squamous epithelium | 3.42e-07 | 3 |
layer of synovial tissue | 3.42e-07 | 3 |
synovial joint | 3.42e-07 | 3 |
synovial membrane of synovial joint | 3.42e-07 | 3 |
periodontium | 3.50e-07 | 6 |
dentition | 3.50e-07 | 6 |
Showing 1 to 10 of 10 entries