FFCP PHASE2:Hg19::chr12:42983782..42983815,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:144165 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:17019 |TSScl...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=144165 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17019 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96MT3 | ||
|association_with_transcript=-210bp_to_NM_153026,uc001rnm.2,uc009zka.2_5end | |association_with_transcript=-210bp_to_NM_153026,uc001rnm.2,uc009zka.2_5end | ||
|cluster_id=chr12:42983782..42983815,- | |cluster_id=chr12:42983782..42983815,- |
Latest revision as of 08:09, 18 September 2015
Short description: | p2@PRICKLE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRICKLE1_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | -210bp_to_NM_153026, uc001rnm.2, uc009zka.2_5end |
EntrezGene: | PRICKLE1 |
HGNC: | 17019 |
UniProt: | Q96MT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@PRICKLE1 |
---|
0
20
40
60
80
100
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 2.83e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.83e-15 | 18 |
endothelial cell of vascular tree | 2.42e-13 | 24 |
endothelial cell of artery | 4.40e-11 | 9 |
meso-epithelial cell | 1.94e-10 | 45 |
vein endothelial cell | 6.34e-10 | 6 |
endothelial cell | 2.40e-09 | 36 |
lining cell | 2.38e-07 | 58 |
barrier cell | 2.38e-07 | 58 |
aortic endothelial cell | 4.94e-07 | 6 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.83e-15 | 18 |
endothelium | 2.83e-15 | 18 |
cardiovascular system endothelium | 2.83e-15 | 18 |
simple squamous epithelium | 1.16e-11 | 22 |
squamous epithelium | 4.03e-11 | 25 |
endothelial tube | 4.40e-11 | 9 |
arterial system endothelium | 4.40e-11 | 9 |
endothelium of artery | 4.40e-11 | 9 |
atypical epithelium | 7.18e-07 | 4 |
Showing 1 to 9 of 9 entries