FFCP PHASE2:Hg19::chr11:2016471..2016492,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3921 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:6502 ...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3921 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=6502 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 06:01, 17 September 2015
Short description: | p3@RPSA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPSA_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 65bp_to_BC010054, BC010055_5end |
EntrezGene: | RPSA |
HGNC: | 6502 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@RPSA |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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extraembryonic cell | 4.26e-29 | 19 |
placental epithelial cell | 2.23e-15 | 3 |
amniotic epithelial cell | 1.38e-10 | 2 |
amnion mesenchymal stem cell | 1.54e-09 | 5 |
chorionic membrane mesenchymal stem cell | 1.38e-07 | 3 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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extraembryonic membrane | 3.19e-33 | 14 |
membranous layer | 3.19e-33 | 14 |
larynx | 4.79e-31 | 9 |
extraembryonic structure | 8.17e-27 | 24 |
upper respiratory tract | 4.43e-22 | 19 |
chorion | 1.70e-17 | 7 |
amnion | 2.22e-17 | 7 |
somatic layer of lateral plate mesoderm | 3.58e-15 | 8 |
placenta | 1.19e-11 | 4 |
allantois | 1.19e-11 | 4 |
Showing 1 to 10 of 21 entries