FFCP PHASE2:Hg19::chr17:6983479..6983490,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10462 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16916 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16916 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8IUN9 | ||
|association_with_transcript=109bp_to_ENST00000254868,ENST00000416562,NM_006344,NM_182906,uc002gej.2,uc002gek.2,uc002gel.2,uc010clv.1_5end | |association_with_transcript=109bp_to_ENST00000254868,ENST00000416562,NM_006344,NM_182906,uc002gej.2,uc002gek.2,uc002gel.2,uc010clv.1_5end | ||
|cluster_id=chr17:6983479..6983490,- | |cluster_id=chr17:6983479..6983490,- |
Latest revision as of 03:18, 17 September 2015
Short description: | p4@CLEC10A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLEC10A_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 109bp_to_ENST00000254868, ENST00000416562, NM_006344, NM_182906, uc002gej.2, uc002gek.2, uc002gel.2, uc010clv.1_5end |
EntrezGene: | CLEC10A |
HGNC: | 16916 |
UniProt: | Q8IUN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@CLEC10A |
---|
0
5
10
15
20
25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 9.47e-103 | 5 |
common dendritic progenitor | 9.47e-103 | 5 |
conventional dendritic cell | 9.93e-69 | 8 |
dendritic cell | 2.40e-56 | 10 |
CD1a-positive Langerhans cell | 6.61e-50 | 2 |
immature CD1a-positive Langerhans cell | 6.61e-50 | 2 |
Langerhans cell | 1.10e-20 | 5 |
macrophage dendritic cell progenitor | 2.72e-10 | 61 |
granulocyte monocyte progenitor cell | 2.11e-09 | 67 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
lymph node | 4.61e-26 | 1 |
lower lobe of right lung | 9.79e-26 | 1 |
right lung lobe | 9.79e-26 | 1 |
lower lobe of lung | 9.79e-26 | 1 |
lobe of lung | 9.79e-26 | 1 |
right lung | 9.79e-26 | 1 |
immune system | 1.23e-09 | 93 |
duodenum | 1.81e-09 | 2 |
bone marrow | 2.52e-08 | 76 |
hemolymphoid system | 2.59e-08 | 108 |
Showing 1 to 10 of 12 entries