FFCP PHASE2:Hg19::chr12:115122318..115122331,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6926 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11602 |TSSclas...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11602 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JIZ8,O15119 | ||
|association_with_transcript=-349bp_to_ENST00000349155,ENST00000361100,NM_005996,NM_016569,uc001tvt.1,uc001tvu.1,uc010syw.1_5end | |association_with_transcript=-349bp_to_ENST00000349155,ENST00000361100,NM_005996,NM_016569,uc001tvt.1,uc001tvu.1,uc010syw.1_5end | ||
|cluster_id=chr12:115122318..115122331,- | |cluster_id=chr12:115122318..115122331,- | ||
Latest revision as of 14:43, 16 September 2015
| Short description: | p2@TBX3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_TBX3_5end |
| Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
| Association with transcript: | -349bp_to_ENST00000349155, ENST00000361100, NM_005996, NM_016569, uc001tvt.1, uc001tvu.1, uc010syw.1_5end |
| EntrezGene: | TBX3 |
| HGNC: | 11602 |
| UniProt: | C9JIZ8O15119 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@TBX3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast of gingiva | 1.12e-07 | 5 |
| fibroblast of periodontium | 1.42e-07 | 6 |
| muscle precursor cell | 4.00e-07 | 58 |
| myoblast | 4.00e-07 | 58 |
| multi-potent skeletal muscle stem cell | 4.00e-07 | 58 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| mesenchyme | 1.39e-13 | 160 |
| entire embryonic mesenchyme | 1.39e-13 | 160 |
| trunk mesenchyme | 8.62e-12 | 122 |
| subdivision of skeletal system | 9.97e-10 | 16 |
| dense mesenchyme tissue | 5.91e-09 | 73 |
| somite | 1.47e-08 | 71 |
| presomitic mesoderm | 1.47e-08 | 71 |
| presumptive segmental plate | 1.47e-08 | 71 |
| dermomyotome | 1.47e-08 | 71 |
| trunk paraxial mesoderm | 1.47e-08 | 71 |
Showing 1 to 10 of 37 entries
