FFCP PHASE1:Mm9::chrX:72625134..72625162,-: Difference between revisions
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{{FFCP|EntrezGene=14069|HGNC=|MCL_coexpression_id=26|UniProt=B2RRC9,Q8BQ43,B7ZNH8,Q06194|association_with_transcript=217bp_to_ENSMUST00000114085,NM_001161373,NM_001161374,NM_007977,uc009tpt.2,uc012hlb.1,uc012hlc.1_5end|description=CAGE_peak_1_at_F8_5end|id=chrX:72625134..72625162,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.85e-23!49;UBERON:0005173!3.85e-23!49;UBERON:0002417!3.85e-23!49;UBERON:0000916!3.85e-23!49;UBERON:0009569!2.59e-21!66;UBERON:0005177!1.86e-17!85;UBERON:0002365!6.59e-15!25;UBERON:0002330!6.59e-15!25;UBERON:0002107!2.76e-13!22;UBERON:0007499!2.76e-13!22;UBERON:0006925!2.76e-13!22;UBERON:0009497!2.76e-13!22;UBERON:0000015!2.76e-13!22;UBERON:0002423!2.76e-13!22;UBERON:0006235!2.76e-13!22;UBERON:0008835!2.76e-13!22;UBERON:0003894!2.76e-13!22;UBERON:0004161!2.76e-13!22;UBERON:0008836!2.76e-13!22;UBERON:0003104!3.24e-12!131;UBERON:0009142!3.24e-12!131;UBERON:0009854!3.72e-12!23;UBERON:0009856!3.72e-12!23;UBERON:0002100!1.33e-11!98;UBERON:0002530!6.79e-10!65;UBERON:0000949!8.39e-10!72;UBERON:0002368!1.61e-09!60;UBERON:0000466!2.41e-09!79;UBERON:0000926!4.75e-09!193;UBERON:0004120!4.75e-09!193;UBERON:0006603!4.75e-09!193;UBERON:0005057!1.48e-08!51;UBERON:0003914!1.83e-08!47;UBERON:0001041!2.29e-08!92;UBERON:0000077!2.37e-08!97;UBERON:0005256!1.82e-07!47;UBERON:0001048!6.75e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.19e-31,49;UBERON:0005173,1.19e-31,49;UBERON:0002417,1.19e-31,49;UBERON:0000916,1.19e-31,49;UBERON:0009569,2.16e-22,66;UBERON:0002365,1.23e-21,25;UBERON:0002330,1.23e-21,25;UBERON:0003104,1.63e-21,61;UBERON:0009142,1.63e-21,61;UBERON:0005177,1.37e-20,79;UBERON:0002107,2.97e-19,22;UBERON:0007499,2.97e-19,22;UBERON:0006925,2.97e-19,22;UBERON:0009497,2.97e-19,22;UBERON:0000015,2.97e-19,22;UBERON:0002423,2.97e-19,22;UBERON:0006235,2.97e-19,22;UBERON:0008835,2.97e-19,22;UBERON:0003894,2.97e-19,22;UBERON:0004161,2.97e-19,22;UBERON:0008836,2.97e-19,22;UBERON:0009854,4.72e-18,23;UBERON:0009856,4.72e-18,23;UBERON:0002100,5.78e-16,90;UBERON:0005256,1.36e-13,45;UBERON:0002530,1.18e-10,65;UBERON:0002368,1.25e-09,60;UBERON:0000949,1.02e-08,72|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0.999329285446988,1.82227740650843,0,0.157731082679119,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,735.096343347455,165.201384380426,0,2.15881276655127,10.3964226791627,6.72040330646003,7.3031098468511,0,0,0,0,0,0,0,0,0,0,10.5049169341535,160.800425744894,12.6175818205101,1.04091196059682,1.52232739156071,2.30615497256059,2.56228488939458,4.35078216402108,4.77533047052767,2.71914464507811,1.87979163995885,4.42305275974937,1.7794353494215,3.3126227769059,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,4.72746488318353,0.758168275301024,0.420883711772948,0.260240885925407,0,0.180062129805349,0.753524089178575,0.408218994907967,0.512454881139399,0.187403449119458,0,0,0,0,0,0.278047249225598,0.696504333044333,1.4404749548556,0,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.617068451549513,0.465067889500816,0.268273401399619,0.700592054203017,0.329119699826961,0.820837320395476,0.405344047729279,0.438599962275997,0.439100230582101,0.268412837520744,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0.257734922644187,0.80673409849337,0.667134131534611,0.570676878337677,0.949058123089023,0,0.754005626400808,0.198956472041151,0.58489226135736,1.79763881730844,0,0,0,2.85621281524322,6.76246414038483,7.33144780243131,10.0855293327165,5.6810014111158,12.0149420536089,7.52811754695971,7.69293766422737,12.9567022117891,40.9104625380266,1.50160595144485,1.96558995113203,3.14806957338795,7.30296436998611,10.1294407096015,15.786802810448,25.892652370573,25.1309601501305,15.3754391385326,58.9449646762154,45.7733365632259,33.388031023258,34.3507274008072,30.676957712247,35.7008205808892,0.739012760666419,0.37898282354097,0.325929952884052,0.509235257325564,0.704070744865506,0.837531287209079,1.90434912708811,0.195133647857799,0.788175720530955,0.44292937929755,0.478364305972461,1.47476983244164,1.55416483679306,0.723245292907558,0,0,3.44234991113325,4.13905119457099,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0.321321316421807,1.56134093729095,0.534196811001766,0.488660878060728,0.824850614862677,2.65490276679926,0.242780636154981,0.302323556964751,0.188605079755898,0,0.614870295887855,0.258428293168221,0.727067458955011,1.78248689192361,1.8962205476149,1.05418608574999,0,3.74483566329167,0.18006109403131,0,0.214337035031592,1.06404140185364,0.713475270408282,3.29098041204242,0.913394847343798,0.469343416127421,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,1.45740418314925,0,4.44264290074417,0.82554747185289,6.2966139305702,5.08594833912666,1.77702496037333,3.88922894451088,0,0,0.138199973804424,0,0,0.813277868507395,0.540026704109006,0.209088296014469,0.218362563746178,0.539457385539283,3.30613822901344,0,0,4.97071450469541,0,0,0,0.194451188344048,0,0,0.234714477291508,0.651021924219751,0,0,0,1.26404448251271,0.202725215290164,0.410843828659309,0.649604114888975,0.895133478337407,0.596044064343795,0.240390899039938,1.32920574457119,0.100966449948148,0.381034033274999,0.100826185136841,0.584747284438515,0.384847366561318,0.350630706544707,0,0,0,0,1.54551675225752,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,1.21553358534147,0.838452650511929,0.551530525350042,2.44471400581777,1.44224540067226,1.60459604795908,1.51618327058278,3.54871019846336,1.50901073108861,1.96647165686753,2.11283002936069,2.06767688240208,1.90517476513229,1.39061191133827,0.578727661391115,3.29668720642645,2.64958056241915,2.74295401908332,1.95223386775271,1.66905332963125,2.47088908274958,2.54095327121393,2.28459441307527,2.0122077016005,1.8414879800649,1.35804113845862,1.68342681497322,0.949080144993393,0.591026894253381,1.63692417267876,2.47898945897546,2.12197272079256,0,3.04111090979031,3.65280791882107,0.57386499620653,1.98532277207564,2.31867835620421|short_description=p1@F8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14069 | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B2RRC9,uniprot:Q8BQ43,uniprot:B7ZNH8,uniprot:Q06194 | |||
|association_with_transcript=217bp_to_ENSMUST00000114085,NM_001161373,NM_001161374,NM_007977,uc009tpt.2,uc012hlb.1,uc012hlc.1_5end | |||
|cluster_id=chrX:72625134..72625162,- | |||
|description=CAGE_peak_1_at_F8_5end | |||
|id=chrX:72625134..72625162,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.85e-23!49;UBERON:0005173!3.85e-23!49;UBERON:0002417!3.85e-23!49;UBERON:0000916!3.85e-23!49;UBERON:0009569!2.59e-21!66;UBERON:0005177!1.86e-17!85;UBERON:0002365!6.59e-15!25;UBERON:0002330!6.59e-15!25;UBERON:0002107!2.76e-13!22;UBERON:0007499!2.76e-13!22;UBERON:0006925!2.76e-13!22;UBERON:0009497!2.76e-13!22;UBERON:0000015!2.76e-13!22;UBERON:0002423!2.76e-13!22;UBERON:0006235!2.76e-13!22;UBERON:0008835!2.76e-13!22;UBERON:0003894!2.76e-13!22;UBERON:0004161!2.76e-13!22;UBERON:0008836!2.76e-13!22;UBERON:0003104!3.24e-12!131;UBERON:0009142!3.24e-12!131;UBERON:0009854!3.72e-12!23;UBERON:0009856!3.72e-12!23;UBERON:0002100!1.33e-11!98;UBERON:0002530!6.79e-10!65;UBERON:0000949!8.39e-10!72;UBERON:0002368!1.61e-09!60;UBERON:0000466!2.41e-09!79;UBERON:0000926!4.75e-09!193;UBERON:0004120!4.75e-09!193;UBERON:0006603!4.75e-09!193;UBERON:0005057!1.48e-08!51;UBERON:0003914!1.83e-08!47;UBERON:0001041!2.29e-08!92;UBERON:0000077!2.37e-08!97;UBERON:0005256!1.82e-07!47;UBERON:0001048!6.75e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.19e-31,49;UBERON:0005173,1.19e-31,49;UBERON:0002417,1.19e-31,49;UBERON:0000916,1.19e-31,49;UBERON:0009569,2.16e-22,66;UBERON:0002365,1.23e-21,25;UBERON:0002330,1.23e-21,25;UBERON:0003104,1.63e-21,61;UBERON:0009142,1.63e-21,61;UBERON:0005177,1.37e-20,79;UBERON:0002107,2.97e-19,22;UBERON:0007499,2.97e-19,22;UBERON:0006925,2.97e-19,22;UBERON:0009497,2.97e-19,22;UBERON:0000015,2.97e-19,22;UBERON:0002423,2.97e-19,22;UBERON:0006235,2.97e-19,22;UBERON:0008835,2.97e-19,22;UBERON:0003894,2.97e-19,22;UBERON:0004161,2.97e-19,22;UBERON:0008836,2.97e-19,22;UBERON:0009854,4.72e-18,23;UBERON:0009856,4.72e-18,23;UBERON:0002100,5.78e-16,90;UBERON:0005256,1.36e-13,45;UBERON:0002530,1.18e-10,65;UBERON:0002368,1.25e-09,60;UBERON:0000949,1.02e-08,72 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0.999329285446988,1.82227740650843,0,0.157731082679119,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,735.096343347455,165.201384380426,0,2.15881276655127,10.3964226791627,6.72040330646003,7.3031098468511,0,0,0,0,0,0,0,0,0,0,10.5049169341535,160.800425744894,12.6175818205101,1.04091196059682,1.52232739156071,2.30615497256059,2.56228488939458,4.35078216402108,4.77533047052767,2.71914464507811,1.87979163995885,4.42305275974937,1.7794353494215,3.3126227769059,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,4.72746488318353,0.758168275301024,0.420883711772948,0.260240885925407,0,0.180062129805349,0.753524089178575,0.408218994907967,0.512454881139399,0.187403449119458,0,0,0,0,0,0.278047249225598,0.696504333044333,1.4404749548556,0,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.617068451549513,0.465067889500816,0.268273401399619,0.700592054203017,0.329119699826961,0.820837320395476,0.405344047729279,0.438599962275997,0.439100230582101,0.268412837520744,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0.257734922644187,0.80673409849337,0.667134131534611,0.570676878337677,0.949058123089023,0,0.754005626400808,0.198956472041151,0.58489226135736,1.79763881730844,0,0,0,2.85621281524322,6.76246414038483,7.33144780243131,10.0855293327165,5.6810014111158,12.0149420536089,7.52811754695971,7.69293766422737,12.9567022117891,40.9104625380266,1.50160595144485,1.96558995113203,3.14806957338795,7.30296436998611,10.1294407096015,15.786802810448,25.892652370573,25.1309601501305,15.3754391385326,58.9449646762154,45.7733365632259,33.388031023258,34.3507274008072,30.676957712247,35.7008205808892,0.739012760666419,0.37898282354097,0.325929952884052,0.509235257325564,0.704070744865506,0.837531287209079,1.90434912708811,0.195133647857799,0.788175720530955,0.44292937929755,0.478364305972461,1.47476983244164,1.55416483679306,0.723245292907558,0,0,3.44234991113325,4.13905119457099,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0.321321316421807,1.56134093729095,0.534196811001766,0.488660878060728,0.824850614862677,2.65490276679926,0.242780636154981,0.302323556964751,0.188605079755898,0,0.614870295887855,0.258428293168221,0.727067458955011,1.78248689192361,1.8962205476149,1.05418608574999,0,3.74483566329167,0.18006109403131,0,0.214337035031592,1.06404140185364,0.713475270408282,3.29098041204242,0.913394847343798,0.469343416127421,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,1.45740418314925,0,4.44264290074417,0.82554747185289,6.2966139305702,5.08594833912666,1.77702496037333,3.88922894451088,0,0,0.138199973804424,0,0,0.813277868507395,0.540026704109006,0.209088296014469,0.218362563746178,0.539457385539283,3.30613822901344,0,0,4.97071450469541,0,0,0,0.194451188344048,0,0,0.234714477291508,0.651021924219751,0,0,0,1.26404448251271,0.202725215290164,0.410843828659309,0.649604114888975,0.895133478337407,0.596044064343795,0.240390899039938,1.32920574457119,0.100966449948148,0.381034033274999,0.100826185136841,0.584747284438515,0.384847366561318,0.350630706544707,0,0,0,0,1.54551675225752,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,1.21553358534147,0.838452650511929,0.551530525350042,2.44471400581777,1.44224540067226,1.60459604795908,1.51618327058278,3.54871019846336,1.50901073108861,1.96647165686753,2.11283002936069,2.06767688240208,1.90517476513229,1.39061191133827,0.578727661391115,3.29668720642645,2.64958056241915,2.74295401908332,1.95223386775271,1.66905332963125,2.47088908274958,2.54095327121393,2.28459441307527,2.0122077016005,1.8414879800649,1.35804113845862,1.68342681497322,0.949080144993393,0.591026894253381,1.63692417267876,2.47898945897546,2.12197272079256,0,3.04111090979031,3.65280791882107,0.57386499620653,1.98532277207564,2.31867835620421 | |||
|short_description=p1@F8 | |||
}} |
Revision as of 10:39, 6 August 2015
Short description: | p1@F8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_F8_5end |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | 217bp_to_ENSMUST00000114085, NM_001161373, NM_001161374, NM_007977, uc009tpt.2, uc012hlb.1, uc012hlc.1_5end |
EntrezGene: | 14069 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.19e-31 | 49 |
abdominal segment element | 1.19e-31 | 49 |
abdominal segment of trunk | 1.19e-31 | 49 |
abdomen | 1.19e-31 | 49 |
subdivision of trunk | 2.16e-22 | 66 |
exocrine gland | 1.23e-21 | 25 |
exocrine system | 1.23e-21 | 25 |
mesenchyme | 1.63e-21 | 61 |
entire embryonic mesenchyme | 1.63e-21 | 61 |
trunk region element | 1.37e-20 | 79 |
liver | 2.97e-19 | 22 |
epithelial sac | 2.97e-19 | 22 |
digestive gland | 2.97e-19 | 22 |
epithelium of foregut-midgut junction | 2.97e-19 | 22 |
anatomical boundary | 2.97e-19 | 22 |
hepatobiliary system | 2.97e-19 | 22 |
foregut-midgut junction | 2.97e-19 | 22 |
hepatic diverticulum | 2.97e-19 | 22 |
liver primordium | 2.97e-19 | 22 |
septum transversum | 2.97e-19 | 22 |
liver bud | 2.97e-19 | 22 |
digestive tract diverticulum | 4.72e-18 | 23 |
sac | 4.72e-18 | 23 |
trunk | 5.78e-16 | 90 |
trunk mesenchyme | 1.36e-13 | 45 |
gland | 1.18e-10 | 65 |
endocrine gland | 1.25e-09 | 60 |
endocrine system | 1.02e-08 | 72 |