FFCP PHASE1:Mm9::chrX:66015050..66015062,+: Difference between revisions
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{{FFCP|EntrezGene=207854|HGNC=|MCL_coexpression_id=144|UniProt=B7ZW84|association_with_transcript=0bp_to_ENSMUST00000114647_5end|description=CAGE_peak_2_at_Fmr1nb_5end|id=chrX:66015050..66015062,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000057,5.27e-09,1;CL:0000632,5.27e-09,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.86e-12!18;UBERON:0005564!1.86e-12!18;UBERON:0003133!9.45e-12!24;UBERON:0004176!1.50e-11!17;UBERON:0009196!1.50e-11!17;UBERON:0009117!1.50e-11!17;UBERON:0005156!1.77e-10!26;UBERON:0000990!1.77e-10!26;UBERON:0000473!4.55e-10!14;UBERON:0003135!3.35e-09!15;UBERON:0003101!1.91e-08!16;UBERON:0000079!1.91e-08!16|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.76e-25,3;UBERON:0000478,1.76e-25,3;UBERON:0000158,1.76e-25,3;UBERON:0001987,1.55e-17,2;UBERON:0003124,1.55e-17,2;UBERON:0004340,1.55e-17,2;UBERON:0003133,3.42e-16,24;UBERON:0005156,6.34e-15,26;UBERON:0000990,6.34e-15,26;UBERON:0004176,7.10e-12,17;UBERON:0009196,7.10e-12,17;UBERON:0009117,7.10e-12,17;UBERON:0000991,3.22e-11,18;UBERON:0005564,3.22e-11,18;UBERON:0003134,8.77e-10,8;UBERON:0000305,1.19e-09,1;UBERON:0000473,1.51e-09,14;UBERON:0005795,3.05e-09,4;UBERON:0000995,3.05e-09,4;UBERON:0003135,6.25e-09,15;UBERON:0000474,9.28e-09,9;UBERON:0003101,2.18e-08,16;UBERON:0000079,2.18e-08,16;UBERON:0003975,1.45e-07,5;UBERON:0003100,2.91e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,25.2138867089061,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0.540186184383045,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,0,0,0.991256348951394,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,1.29682829924817,0.398282546508734,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13678724400706,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74416636610244,29.8683219917986,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0,0,3.94585057078933,0.448549638131936,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0,0.911430693907651,6.50127935439407,10.6297013163443,7.4887801627045,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0.354951612318675,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p2@Fmr1nb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:207854 | |||
|HGNC= | |||
|MCL_coexpression_id=144 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B7ZW84 | |||
|association_with_transcript=0bp_to_ENSMUST00000114647_5end | |||
|cluster_id=chrX:66015050..66015062,+ | |||
|description=CAGE_peak_2_at_Fmr1nb_5end | |||
|id=chrX:66015050..66015062,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.27e-09,1;CL:0000632,5.27e-09,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.86e-12!18;UBERON:0005564!1.86e-12!18;UBERON:0003133!9.45e-12!24;UBERON:0004176!1.50e-11!17;UBERON:0009196!1.50e-11!17;UBERON:0009117!1.50e-11!17;UBERON:0005156!1.77e-10!26;UBERON:0000990!1.77e-10!26;UBERON:0000473!4.55e-10!14;UBERON:0003135!3.35e-09!15;UBERON:0003101!1.91e-08!16;UBERON:0000079!1.91e-08!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.76e-25,3;UBERON:0000478,1.76e-25,3;UBERON:0000158,1.76e-25,3;UBERON:0001987,1.55e-17,2;UBERON:0003124,1.55e-17,2;UBERON:0004340,1.55e-17,2;UBERON:0003133,3.42e-16,24;UBERON:0005156,6.34e-15,26;UBERON:0000990,6.34e-15,26;UBERON:0004176,7.10e-12,17;UBERON:0009196,7.10e-12,17;UBERON:0009117,7.10e-12,17;UBERON:0000991,3.22e-11,18;UBERON:0005564,3.22e-11,18;UBERON:0003134,8.77e-10,8;UBERON:0000305,1.19e-09,1;UBERON:0000473,1.51e-09,14;UBERON:0005795,3.05e-09,4;UBERON:0000995,3.05e-09,4;UBERON:0003135,6.25e-09,15;UBERON:0000474,9.28e-09,9;UBERON:0003101,2.18e-08,16;UBERON:0000079,2.18e-08,16;UBERON:0003975,1.45e-07,5;UBERON:0003100,2.91e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,25.2138867089061,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0.540186184383045,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,0,0,0.991256348951394,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,1.29682829924817,0.398282546508734,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13678724400706,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74416636610244,29.8683219917986,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0,0,3.94585057078933,0.448549638131936,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0,0.911430693907651,6.50127935439407,10.6297013163443,7.4887801627045,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0.354951612318675,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p2@Fmr1nb | |||
}} |
Revision as of 09:20, 6 August 2015
Short description: | p2@Fmr1nb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fmr1nb_5end |
Coexpression cluster: | MCL_coexpression_mm9:144 |
Association with transcript: | 0bp_to_ENSMUST00000114647_5end |
EntrezGene: | 207854 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.27e-09 | 1 |
hepatic stellate cell | 5.27e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.76e-25 | 3 |
extraembryonic structure | 1.76e-25 | 3 |
membranous layer | 1.76e-25 | 3 |
placenta | 1.55e-17 | 2 |
chorion | 1.55e-17 | 2 |
allantois | 1.55e-17 | 2 |
reproductive organ | 3.42e-16 | 24 |
reproductive structure | 6.34e-15 | 26 |
reproductive system | 6.34e-15 | 26 |
external genitalia | 7.10e-12 | 17 |
indifferent external genitalia | 7.10e-12 | 17 |
indifferent gonad | 7.10e-12 | 17 |
gonad | 3.22e-11 | 18 |
gonad primordium | 3.22e-11 | 18 |
female reproductive organ | 8.77e-10 | 8 |
amnion | 1.19e-09 | 1 |
testis | 1.51e-09 | 14 |
embryonic uterus | 3.05e-09 | 4 |
uterus | 3.05e-09 | 4 |
male reproductive organ | 6.25e-09 | 15 |
female reproductive system | 9.28e-09 | 9 |
male organism | 2.18e-08 | 16 |
male reproductive system | 2.18e-08 | 16 |
internal female genitalia | 1.45e-07 | 5 |
female organism | 2.91e-07 | 11 |