FFCP PHASE1:Mm9::chr13:84204310..84204329,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=47bp_to_uc007rin.1_5end|description=CAGE_peak_1_at_uc007rin.1_5end|id=chr13:84204310..84204329,-|ontology_enrichment_celltype=CL:0000117!3.16e-19!23;CL:0000337!3.16e-19!23;CL:0002319!1.87e-15!43;CL:0000221!7.48e-15!44;CL:0000133!7.48e-15!44;CL:0000540!7.40e-12!33;CL:0000047!7.40e-12!33;CL:0000031!7.40e-12!33;CL:0000404!7.40e-12!33;CL:0000055!8.74e-12!50;CL:0000393!8.05e-09!39;CL:0000211!8.05e-09!39;CL:0002609!5.95e-08!6|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-23,23;CL:0000337,3.30e-23,23;CL:0002319,4.97e-21,43;CL:0000221,2.20e-20,44;CL:0000133,2.20e-20,44;CL:0000540,1.49e-14,33;CL:0000047,1.49e-14,33;CL:0000031,1.49e-14,33;CL:0000404,1.49e-14,33;CL:0002609,4.43e-12,6;CL:0000393,1.61e-11,39;CL:0000211,1.61e-11,39;CL:0002321,3.47e-10,70;CL:0002453,9.98e-10,8;CL:0000333,1.55e-07,10;CL:0000095,1.55e-07,10;CL:0000243,1.55e-07,10;CL:0000123,1.55e-07,10;CL:0000125,1.55e-07,10;CL:0000030,1.55e-07,10;CL:0000339,1.55e-07,10;CL:0000128,5.58e-07,6;CL:0000126,5.58e-07,6;CL:0000127,5.58e-07,6;CL:0002608,6.15e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.49e-19!73;UBERON:0005743!7.49e-19!73;UBERON:0002020!2.16e-18!34;UBERON:0000073!6.48e-18!75;UBERON:0001016!6.48e-18!75;UBERON:0001049!1.63e-16!52;UBERON:0005068!1.63e-16!52;UBERON:0006241!1.63e-16!52;UBERON:0007135!1.63e-16!52;UBERON:0002791!1.07e-13!29;UBERON:0003528!1.07e-13!29;UBERON:0001893!1.07e-13!29;UBERON:0002346!3.47e-13!71;UBERON:0003075!3.47e-13!71;UBERON:0007284!3.47e-13!71;UBERON:0004121!6.43e-13!102;UBERON:0000924!6.43e-13!102;UBERON:0006601!6.43e-13!102;UBERON:0000955!7.47e-13!50;UBERON:0006238!7.47e-13!50;UBERON:0000489!2.22e-12!21;UBERON:0000033!2.34e-12!63;UBERON:0002616!3.61e-12!49;UBERON:0003056!5.64e-12!49;UBERON:0003080!6.76e-11!40;UBERON:0002780!1.29e-10!39;UBERON:0001890!1.29e-10!39;UBERON:0006240!1.29e-10!39;UBERON:0000956!1.89e-09!21;UBERON:0001869!1.89e-09!21;UBERON:0000203!1.89e-09!21;UBERON:0002113!2.95e-08!14;UBERON:0003918!2.95e-08!14;UBERON:0005095!2.95e-08!14;UBERON:0007687!2.95e-08!14;UBERON:0001954!3.67e-08!7;UBERON:0003022!3.67e-08!7;UBERON:0002421!3.67e-08!7;UBERON:0000349!3.67e-08!7;UBERON:0002600!3.67e-08!7;UBERON:0003076!8.56e-07!12;UBERON:0003057!8.56e-07!12;UBERON:0006554!8.93e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.28e-21,34;UBERON:0001017,1.69e-17,73;UBERON:0001016,8.52e-17,75;UBERON:0001049,3.69e-14,52;UBERON:0005068,3.69e-14,52;UBERON:0006241,3.69e-14,52;UBERON:0007135,3.69e-14,52;UBERON:0003528,3.83e-14,29;UBERON:0002791,3.83e-14,29;UBERON:0001893,3.83e-14,29;UBERON:0000073,2.19e-13,54;UBERON:0001954,2.00e-12,7;UBERON:0003022,2.00e-12,7;UBERON:0002421,2.00e-12,7;UBERON:0000349,2.00e-12,7;UBERON:0002600,2.00e-12,7;UBERON:0004121,1.99e-11,95;UBERON:0000924,1.99e-11,95;UBERON:0006601,1.99e-11,95;UBERON:0000489,5.46e-11,21;UBERON:0002346,2.88e-10,64;UBERON:0003075,2.88e-10,64;UBERON:0007284,2.88e-10,64;UBERON:0000955,3.09e-10,47;UBERON:0006238,3.09e-10,47;UBERON:0000956,4.13e-10,21;UBERON:0001869,4.13e-10,21;UBERON:0000203,4.13e-10,21;UBERON:0001948,1.28e-09,5;UBERON:0002315,1.28e-09,5;UBERON:0002616,2.20e-09,46;UBERON:0002780,2.46e-09,39;UBERON:0001890,2.46e-09,39;UBERON:0006240,2.46e-09,39;UBERON:0003080,5.45e-09,40;UBERON:0010371,3.19e-08,73;UBERON:0002240,6.54e-08,6;UBERON:0005174,6.54e-08,6;UBERON:0001137,6.54e-08,6;UBERON:0002619,6.15e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97680500417429,3.07560655828261,2.13872888981712,1.1198913730029,2.87505128729943,0,0,0,0,0,0,4.24864567805155,12.6957835025288,6.97214543856797,0,0,0,0,0,2.39680088414724,2.68952813725088,6.0139975138917,10.8004750665353,10.0955981448663,4.85606673486466,4.19650227808066,8.69684674426174,13.3225204715349,12.8690630125403,0,0.255374676170375,0.153606533256243,3.16527090552465,5.30628332893976,5.73004707612436,0.558365998002762,1.12552522006336,0.30559649555362,3.83017161115768,7.11858403995515,10.4383689662168,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04723353406728,0,0,0,0,0.149790639404823,0,5.02617408451458,0.173824320192276,0,0.62336413367868,0.324482526135515,0.305518091550949,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0.816437989815934,0.896796041993948,0.468508622798644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,5.65975368086064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,1.62921062276251,1.55161989734101,1.05203729835478,2.27651533647326,2.21415221969403,3.61097074035162,2.46794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,1.92792789853084,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,1.71853182343688,0,0,0,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,0,1.53660245178721,0.729320151204882,0.628839487883947,0.919217542250071,0.222246727801615,0.618105171716683,1.28367683836726,0.505394423527595,1.2673964994512,0.943131706930381,1.49826411951812,0.640251524048693,0.574354689556133,1.42888107384922,0.463537303779422,1.92909220463705,1.23625770240992,1.17759136107518,1.02860775715625,0.70990322463735,0.953744759789284,0.581385666529314,1.03520318456864,1.18460451048347,0.182927972872773,1.8414879800649,0.271608227691724,1.12228454331548,1.06771516311757,0.886540341380071,0,0.929621047115796,1.15743966588685,1.24905288968973,0.233931608445408,0.214871054048298,0,0,0|short_description=p1@uc007rin.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=47bp_to_uc007rin.1_5end | |||
|cluster_id=chr13:84204310..84204329,- | |||
|description=CAGE_peak_1_at_uc007rin.1_5end | |||
|id=chr13:84204310..84204329,- | |||
|ontology_enrichment_celltype=CL:0000117!3.16e-19!23;CL:0000337!3.16e-19!23;CL:0002319!1.87e-15!43;CL:0000221!7.48e-15!44;CL:0000133!7.48e-15!44;CL:0000540!7.40e-12!33;CL:0000047!7.40e-12!33;CL:0000031!7.40e-12!33;CL:0000404!7.40e-12!33;CL:0000055!8.74e-12!50;CL:0000393!8.05e-09!39;CL:0000211!8.05e-09!39;CL:0002609!5.95e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-23,23;CL:0000337,3.30e-23,23;CL:0002319,4.97e-21,43;CL:0000221,2.20e-20,44;CL:0000133,2.20e-20,44;CL:0000540,1.49e-14,33;CL:0000047,1.49e-14,33;CL:0000031,1.49e-14,33;CL:0000404,1.49e-14,33;CL:0002609,4.43e-12,6;CL:0000393,1.61e-11,39;CL:0000211,1.61e-11,39;CL:0002321,3.47e-10,70;CL:0002453,9.98e-10,8;CL:0000333,1.55e-07,10;CL:0000095,1.55e-07,10;CL:0000243,1.55e-07,10;CL:0000123,1.55e-07,10;CL:0000125,1.55e-07,10;CL:0000030,1.55e-07,10;CL:0000339,1.55e-07,10;CL:0000128,5.58e-07,6;CL:0000126,5.58e-07,6;CL:0000127,5.58e-07,6;CL:0002608,6.15e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.49e-19!73;UBERON:0005743!7.49e-19!73;UBERON:0002020!2.16e-18!34;UBERON:0000073!6.48e-18!75;UBERON:0001016!6.48e-18!75;UBERON:0001049!1.63e-16!52;UBERON:0005068!1.63e-16!52;UBERON:0006241!1.63e-16!52;UBERON:0007135!1.63e-16!52;UBERON:0002791!1.07e-13!29;UBERON:0003528!1.07e-13!29;UBERON:0001893!1.07e-13!29;UBERON:0002346!3.47e-13!71;UBERON:0003075!3.47e-13!71;UBERON:0007284!3.47e-13!71;UBERON:0004121!6.43e-13!102;UBERON:0000924!6.43e-13!102;UBERON:0006601!6.43e-13!102;UBERON:0000955!7.47e-13!50;UBERON:0006238!7.47e-13!50;UBERON:0000489!2.22e-12!21;UBERON:0000033!2.34e-12!63;UBERON:0002616!3.61e-12!49;UBERON:0003056!5.64e-12!49;UBERON:0003080!6.76e-11!40;UBERON:0002780!1.29e-10!39;UBERON:0001890!1.29e-10!39;UBERON:0006240!1.29e-10!39;UBERON:0000956!1.89e-09!21;UBERON:0001869!1.89e-09!21;UBERON:0000203!1.89e-09!21;UBERON:0002113!2.95e-08!14;UBERON:0003918!2.95e-08!14;UBERON:0005095!2.95e-08!14;UBERON:0007687!2.95e-08!14;UBERON:0001954!3.67e-08!7;UBERON:0003022!3.67e-08!7;UBERON:0002421!3.67e-08!7;UBERON:0000349!3.67e-08!7;UBERON:0002600!3.67e-08!7;UBERON:0003076!8.56e-07!12;UBERON:0003057!8.56e-07!12;UBERON:0006554!8.93e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.28e-21,34;UBERON:0001017,1.69e-17,73;UBERON:0001016,8.52e-17,75;UBERON:0001049,3.69e-14,52;UBERON:0005068,3.69e-14,52;UBERON:0006241,3.69e-14,52;UBERON:0007135,3.69e-14,52;UBERON:0003528,3.83e-14,29;UBERON:0002791,3.83e-14,29;UBERON:0001893,3.83e-14,29;UBERON:0000073,2.19e-13,54;UBERON:0001954,2.00e-12,7;UBERON:0003022,2.00e-12,7;UBERON:0002421,2.00e-12,7;UBERON:0000349,2.00e-12,7;UBERON:0002600,2.00e-12,7;UBERON:0004121,1.99e-11,95;UBERON:0000924,1.99e-11,95;UBERON:0006601,1.99e-11,95;UBERON:0000489,5.46e-11,21;UBERON:0002346,2.88e-10,64;UBERON:0003075,2.88e-10,64;UBERON:0007284,2.88e-10,64;UBERON:0000955,3.09e-10,47;UBERON:0006238,3.09e-10,47;UBERON:0000956,4.13e-10,21;UBERON:0001869,4.13e-10,21;UBERON:0000203,4.13e-10,21;UBERON:0001948,1.28e-09,5;UBERON:0002315,1.28e-09,5;UBERON:0002616,2.20e-09,46;UBERON:0002780,2.46e-09,39;UBERON:0001890,2.46e-09,39;UBERON:0006240,2.46e-09,39;UBERON:0003080,5.45e-09,40;UBERON:0010371,3.19e-08,73;UBERON:0002240,6.54e-08,6;UBERON:0005174,6.54e-08,6;UBERON:0001137,6.54e-08,6;UBERON:0002619,6.15e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97680500417429,3.07560655828261,2.13872888981712,1.1198913730029,2.87505128729943,0,0,0,0,0,0,4.24864567805155,12.6957835025288,6.97214543856797,0,0,0,0,0,2.39680088414724,2.68952813725088,6.0139975138917,10.8004750665353,10.0955981448663,4.85606673486466,4.19650227808066,8.69684674426174,13.3225204715349,12.8690630125403,0,0.255374676170375,0.153606533256243,3.16527090552465,5.30628332893976,5.73004707612436,0.558365998002762,1.12552522006336,0.30559649555362,3.83017161115768,7.11858403995515,10.4383689662168,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04723353406728,0,0,0,0,0.149790639404823,0,5.02617408451458,0.173824320192276,0,0.62336413367868,0.324482526135515,0.305518091550949,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0.816437989815934,0.896796041993948,0.468508622798644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,5.65975368086064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,1.62921062276251,1.55161989734101,1.05203729835478,2.27651533647326,2.21415221969403,3.61097074035162,2.46794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,1.92792789853084,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0,1.71853182343688,0,0,0,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,0,1.53660245178721,0.729320151204882,0.628839487883947,0.919217542250071,0.222246727801615,0.618105171716683,1.28367683836726,0.505394423527595,1.2673964994512,0.943131706930381,1.49826411951812,0.640251524048693,0.574354689556133,1.42888107384922,0.463537303779422,1.92909220463705,1.23625770240992,1.17759136107518,1.02860775715625,0.70990322463735,0.953744759789284,0.581385666529314,1.03520318456864,1.18460451048347,0.182927972872773,1.8414879800649,0.271608227691724,1.12228454331548,1.06771516311757,0.886540341380071,0,0.929621047115796,1.15743966588685,1.24905288968973,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p1@uc007rin.1 | |||
}} |
Latest revision as of 09:10, 6 August 2015
Short description: | p1@uc007rin.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007rin.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 47bp_to_uc007rin.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.30e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.30e-23 | 23 |
neural cell | 4.97e-21 | 43 |
ectodermal cell | 2.20e-20 | 44 |
neurectodermal cell | 2.20e-20 | 44 |
neuron | 1.49e-14 | 33 |
neuronal stem cell | 1.49e-14 | 33 |
neuroblast | 1.49e-14 | 33 |
electrically signaling cell | 1.49e-14 | 33 |
neuron of cerebral cortex | 4.43e-12 | 6 |
electrically responsive cell | 1.61e-11 | 39 |
electrically active cell | 1.61e-11 | 39 |
embryonic cell | 3.47e-10 | 70 |
oligodendrocyte precursor cell | 9.98e-10 | 8 |
migratory neural crest cell | 1.55e-07 | 10 |
neuron associated cell | 1.55e-07 | 10 |
glial cell (sensu Vertebrata) | 1.55e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.55e-07 | 10 |
glial cell | 1.55e-07 | 10 |
glioblast | 1.55e-07 | 10 |
glioblast (sensu Vertebrata) | 1.55e-07 | 10 |
oligodendrocyte | 5.58e-07 | 6 |
macroglial cell | 5.58e-07 | 6 |
astrocyte | 5.58e-07 | 6 |
hippocampal neuron | 6.15e-07 | 3 |