FFCP PHASE1:Mm9::chr13:83868737..83868740,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=729|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:83868737..83868740,-|id=chr13:83868737..83868740,-|ontology_enrichment_celltype=CL:0000540!2.57e-11!33;CL:0000047!2.57e-11!33;CL:0000031!2.57e-11!33;CL:0000404!2.57e-11!33;CL:0000117!3.87e-11!23;CL:0000337!3.87e-11!23;CL:0000221!7.71e-10!44;CL:0000133!7.71e-10!44;CL:0000393!5.68e-09!39;CL:0000211!5.68e-09!39;CL:0002319!5.93e-09!43;CL:0002609!1.04e-07!6;CL:0000055!3.89e-07!50;CL:0002613!8.78e-07!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.34e-24!63;UBERON:0002346!2.82e-21!71;UBERON:0003075!2.82e-21!71;UBERON:0007284!2.82e-21!71;UBERON:0004121!2.90e-18!102;UBERON:0000924!2.90e-18!102;UBERON:0006601!2.90e-18!102;UBERON:0003056!1.32e-17!49;UBERON:0000955!2.75e-16!50;UBERON:0006238!2.75e-16!50;UBERON:0007811!8.11e-16!86;UBERON:0001017!1.91e-15!73;UBERON:0005743!1.91e-15!73;UBERON:0002616!5.21e-15!49;UBERON:0000073!7.78e-15!75;UBERON:0001016!7.78e-15!75;UBERON:0001049!4.83e-14!52;UBERON:0005068!4.83e-14!52;UBERON:0006241!4.83e-14!52;UBERON:0007135!4.83e-14!52;UBERON:0000153!8.85e-14!94;UBERON:0002020!2.06e-12!34;UBERON:0002791!1.67e-11!29;UBERON:0003528!1.67e-11!29;UBERON:0001893!1.67e-11!29;UBERON:0000970!6.01e-11!9;UBERON:0000019!6.01e-11!9;UBERON:0000047!6.01e-11!9;UBERON:0004088!6.01e-11!9;UBERON:0002104!6.01e-11!9;UBERON:0001456!6.01e-11!9;UBERON:0003072!6.01e-11!9;UBERON:0003071!6.01e-11!9;UBERON:0004128!6.01e-11!9;UBERON:0000020!5.28e-10!12;UBERON:0001032!5.28e-10!12;UBERON:0004456!5.28e-10!12;UBERON:0003080!7.02e-10!40;UBERON:0000369!8.86e-10!5;UBERON:0002435!8.86e-10!5;UBERON:0000204!8.86e-10!5;UBERON:0010082!8.86e-10!5;UBERON:0005085!4.14e-09!13;UBERON:0002780!7.14e-09!39;UBERON:0001890!7.14e-09!39;UBERON:0006240!7.14e-09!39;UBERON:0001444!1.02e-08!11;UBERON:0002420!3.46e-08!8;UBERON:0007245!3.46e-08!8;UBERON:0010009!3.46e-08!8;UBERON:0010011!3.46e-08!8;UBERON:0000454!3.46e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.98e-20,9;UBERON:0000019,1.98e-20,9;UBERON:0000047,1.98e-20,9;UBERON:0010312,1.98e-20,9;UBERON:0004088,1.98e-20,9;UBERON:0002104,1.98e-20,9;UBERON:0001456,1.98e-20,9;UBERON:0003072,1.98e-20,9;UBERON:0004128,1.98e-20,9;UBERON:0003071,1.98e-20,9;UBERON:0001444,5.67e-17,11;UBERON:0000020,1.13e-15,12;UBERON:0001032,1.13e-15,12;UBERON:0004456,1.13e-15,12;UBERON:0000033,1.42e-14,13;UBERON:0005085,1.42e-14,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.383381884072945,0.919218786610021,0,0.127687338085188,0.153606533256243,0.263772575460388,0.731901148819277,0.52091337055676,0,0,0.15279824777681,0,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0,0,0,0.324482526135515,0,0,0,0.631325567659422,0,0,0.360124259610698,0.452114453507145,0.816437989815934,1.0249097622788,0.468508622798644,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0,0,0,0,0.809621403349789,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68741272937475,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0,0.499621155875892,0,0,0,0,0|short_description=p@chr13:83868737..83868740,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=729 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:83868737..83868740,- | |||
|description=CAGE_peak_at_chr13:83868737..83868740,- | |||
|id=chr13:83868737..83868740,- | |||
|ontology_enrichment_celltype=CL:0000540!2.57e-11!33;CL:0000047!2.57e-11!33;CL:0000031!2.57e-11!33;CL:0000404!2.57e-11!33;CL:0000117!3.87e-11!23;CL:0000337!3.87e-11!23;CL:0000221!7.71e-10!44;CL:0000133!7.71e-10!44;CL:0000393!5.68e-09!39;CL:0000211!5.68e-09!39;CL:0002319!5.93e-09!43;CL:0002609!1.04e-07!6;CL:0000055!3.89e-07!50;CL:0002613!8.78e-07!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.34e-24!63;UBERON:0002346!2.82e-21!71;UBERON:0003075!2.82e-21!71;UBERON:0007284!2.82e-21!71;UBERON:0004121!2.90e-18!102;UBERON:0000924!2.90e-18!102;UBERON:0006601!2.90e-18!102;UBERON:0003056!1.32e-17!49;UBERON:0000955!2.75e-16!50;UBERON:0006238!2.75e-16!50;UBERON:0007811!8.11e-16!86;UBERON:0001017!1.91e-15!73;UBERON:0005743!1.91e-15!73;UBERON:0002616!5.21e-15!49;UBERON:0000073!7.78e-15!75;UBERON:0001016!7.78e-15!75;UBERON:0001049!4.83e-14!52;UBERON:0005068!4.83e-14!52;UBERON:0006241!4.83e-14!52;UBERON:0007135!4.83e-14!52;UBERON:0000153!8.85e-14!94;UBERON:0002020!2.06e-12!34;UBERON:0002791!1.67e-11!29;UBERON:0003528!1.67e-11!29;UBERON:0001893!1.67e-11!29;UBERON:0000970!6.01e-11!9;UBERON:0000019!6.01e-11!9;UBERON:0000047!6.01e-11!9;UBERON:0004088!6.01e-11!9;UBERON:0002104!6.01e-11!9;UBERON:0001456!6.01e-11!9;UBERON:0003072!6.01e-11!9;UBERON:0003071!6.01e-11!9;UBERON:0004128!6.01e-11!9;UBERON:0000020!5.28e-10!12;UBERON:0001032!5.28e-10!12;UBERON:0004456!5.28e-10!12;UBERON:0003080!7.02e-10!40;UBERON:0000369!8.86e-10!5;UBERON:0002435!8.86e-10!5;UBERON:0000204!8.86e-10!5;UBERON:0010082!8.86e-10!5;UBERON:0005085!4.14e-09!13;UBERON:0002780!7.14e-09!39;UBERON:0001890!7.14e-09!39;UBERON:0006240!7.14e-09!39;UBERON:0001444!1.02e-08!11;UBERON:0002420!3.46e-08!8;UBERON:0007245!3.46e-08!8;UBERON:0010009!3.46e-08!8;UBERON:0010011!3.46e-08!8;UBERON:0000454!3.46e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.98e-20,9;UBERON:0000019,1.98e-20,9;UBERON:0000047,1.98e-20,9;UBERON:0010312,1.98e-20,9;UBERON:0004088,1.98e-20,9;UBERON:0002104,1.98e-20,9;UBERON:0001456,1.98e-20,9;UBERON:0003072,1.98e-20,9;UBERON:0004128,1.98e-20,9;UBERON:0003071,1.98e-20,9;UBERON:0001444,5.67e-17,11;UBERON:0000020,1.13e-15,12;UBERON:0001032,1.13e-15,12;UBERON:0004456,1.13e-15,12;UBERON:0000033,1.42e-14,13;UBERON:0005085,1.42e-14,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.383381884072945,0.919218786610021,0,0.127687338085188,0.153606533256243,0.263772575460388,0.731901148819277,0.52091337055676,0,0,0.15279824777681,0,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0,0,0,0.324482526135515,0,0,0,0.631325567659422,0,0,0.360124259610698,0.452114453507145,0.816437989815934,1.0249097622788,0.468508622798644,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0,0,0,0,0.809621403349789,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68741272937475,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p@chr13:83868737..83868740,- | |||
}} |
Latest revision as of 09:05, 6 August 2015
Short description: | p@chr13:83868737..83868740, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:83868737..83868740, - |
Coexpression cluster: | MCL_coexpression_mm9:729 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.98e-20 | 9 |
camera-type eye | 1.98e-20 | 9 |
simple eye | 1.98e-20 | 9 |
immature eye | 1.98e-20 | 9 |
ocular region | 1.98e-20 | 9 |
visual system | 1.98e-20 | 9 |
face | 1.98e-20 | 9 |
optic cup | 1.98e-20 | 9 |
optic vesicle | 1.98e-20 | 9 |
eye primordium | 1.98e-20 | 9 |
subdivision of head | 5.67e-17 | 11 |
sense organ | 1.13e-15 | 12 |
sensory system | 1.13e-15 | 12 |
entire sense organ system | 1.13e-15 | 12 |
head | 1.42e-14 | 13 |
ectodermal placode | 1.42e-14 | 13 |