FFCP PHASE1:Mm9::chr2:110145812..110145827,-: Difference between revisions
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{{FFCP|EntrezGene=170442|HGNC=|MCL_coexpression_id=8|UniProt=A2AGK4,Q924Y0|association_with_transcript=54bp_to_NM_130452,uc008lmu.1_5end|description=CAGE_peak_4_at_Bbox1_5end|id=chr2:110145812..110145827,-|ontology_enrichment_celltype=CL:0000181!9.24e-07!5;CL:0000417!9.24e-07!5;CL:0000668!9.24e-07!5;CL:0000412!9.24e-07!5;CL:0000182!9.24e-07!5|ontology_enrichment_celltype_v019_2=CL:0000066,8.16e-10,25;CL:0000182,5.72e-09,5;CL:0000682,2.12e-07,3;CL:0000223,6.44e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.67e-22!22;UBERON:0007499!1.67e-22!22;UBERON:0006925!1.67e-22!22;UBERON:0009497!1.67e-22!22;UBERON:0000015!1.67e-22!22;UBERON:0002423!1.67e-22!22;UBERON:0006235!1.67e-22!22;UBERON:0008835!1.67e-22!22;UBERON:0003894!1.67e-22!22;UBERON:0004161!1.67e-22!22;UBERON:0008836!1.67e-22!22;UBERON:0009854!3.58e-21!23;UBERON:0009856!3.58e-21!23;UBERON:0002365!1.38e-20!25;UBERON:0002330!1.38e-20!25;UBERON:0001007!6.83e-12!128;UBERON:0001555!6.83e-12!128;UBERON:0007026!6.83e-12!128;UBERON:0004119!1.83e-11!130;UBERON:0000925!1.83e-11!130;UBERON:0006595!1.83e-11!130;UBERON:0005172!7.65e-11!49;UBERON:0005173!7.65e-11!49;UBERON:0002417!7.65e-11!49;UBERON:0000916!7.65e-11!49;UBERON:0004921!8.54e-11!126;UBERON:0004185!8.54e-11!126;UBERON:0000160!3.66e-10!43;UBERON:0003929!1.87e-09!55;UBERON:0005256!8.71e-09!47;UBERON:0005409!4.91e-08!59;UBERON:0003914!5.68e-08!47;UBERON:0000490!4.78e-07!66;UBERON:0000344!5.28e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.47e-23,22;UBERON:0007499,1.47e-23,22;UBERON:0006925,1.47e-23,22;UBERON:0009497,1.47e-23,22;UBERON:0000015,1.47e-23,22;UBERON:0002423,1.47e-23,22;UBERON:0006235,1.47e-23,22;UBERON:0008835,1.47e-23,22;UBERON:0003894,1.47e-23,22;UBERON:0004161,1.47e-23,22;UBERON:0008836,1.47e-23,22;UBERON:0009854,2.26e-22,23;UBERON:0009856,2.26e-22,23;UBERON:0002365,2.74e-20,25;UBERON:0002330,2.74e-20,25;UBERON:0000160,1.65e-15,31;UBERON:0001007,5.24e-15,116;UBERON:0001555,5.24e-15,116;UBERON:0007026,5.24e-15,116;UBERON:0004119,1.24e-14,118;UBERON:0000925,1.24e-14,118;UBERON:0006595,1.24e-14,118;UBERON:0004921,3.16e-14,114;UBERON:0003929,1.82e-12,55;UBERON:0005172,8.09e-10,49;UBERON:0005173,8.09e-10,49;UBERON:0002417,8.09e-10,49;UBERON:0000916,8.09e-10,49;UBERON:0005256,1.12e-09,45;UBERON:0000490,1.23e-09,66;UBERON:0003914,4.08e-09,47;UBERON:0005409,5.02e-09,47;UBERON:0005911,5.02e-09,69;UBERON:0003104,3.61e-07,61;UBERON:0009142,3.61e-07,61|phase1_expression=0,7.67745896806594,4.54999239389536,5.74682001482977,7.51343594919521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.23989391910769,0.68822784320151,8.6134794617253,3.01533397311352,3.44753972297422,0.570070258369122,0.504060259519861,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,25.8127163094416,14.2793980078628,20.5087212822371,28.5901623676974,32.2579358710082,9.26933172869562,0,0,0,0,0,0,0,0,0,0,19.068707913083,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,6.60837565967596,17.1892868331304,0,0,0,0.605050573870028,0.889512175379481,0.951128130562796,4.74529061544512,7.24675400785648,2.76468729680296,6.36660710531683,3.70431765526328,3.59527763461689,1.29682829924817,4.77939055810481,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0.784993639206874,2.09775178667061,42.6891783005494,0.166845105716094,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,1.2731292589071,0.863088412352432,7.29608520487659,4.11842119782122,11.5014565221884,14.5134969590716,10.6092808858951,27.5310976962352,24.3980482389801,30.3939418458921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.661227645802687,0,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.187283014939765,0.256100609619477,0.114870937911227,0,0.231768651889711,0,0,0,0,0,0,0.290692833264657,0.188218760830661,0.338458431566706,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.467863216890817,0.644613162144895,0,0,0|short_description=p4@Bbox1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:170442 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AGK4,uniprot:Q924Y0 | |||
|association_with_transcript=54bp_to_NM_130452,uc008lmu.1_5end | |||
|cluster_id=chr2:110145812..110145827,- | |||
|description=CAGE_peak_4_at_Bbox1_5end | |||
|id=chr2:110145812..110145827,- | |||
|ontology_enrichment_celltype=CL:0000181!9.24e-07!5;CL:0000417!9.24e-07!5;CL:0000668!9.24e-07!5;CL:0000412!9.24e-07!5;CL:0000182!9.24e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.16e-10,25;CL:0000182,5.72e-09,5;CL:0000682,2.12e-07,3;CL:0000223,6.44e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.67e-22!22;UBERON:0007499!1.67e-22!22;UBERON:0006925!1.67e-22!22;UBERON:0009497!1.67e-22!22;UBERON:0000015!1.67e-22!22;UBERON:0002423!1.67e-22!22;UBERON:0006235!1.67e-22!22;UBERON:0008835!1.67e-22!22;UBERON:0003894!1.67e-22!22;UBERON:0004161!1.67e-22!22;UBERON:0008836!1.67e-22!22;UBERON:0009854!3.58e-21!23;UBERON:0009856!3.58e-21!23;UBERON:0002365!1.38e-20!25;UBERON:0002330!1.38e-20!25;UBERON:0001007!6.83e-12!128;UBERON:0001555!6.83e-12!128;UBERON:0007026!6.83e-12!128;UBERON:0004119!1.83e-11!130;UBERON:0000925!1.83e-11!130;UBERON:0006595!1.83e-11!130;UBERON:0005172!7.65e-11!49;UBERON:0005173!7.65e-11!49;UBERON:0002417!7.65e-11!49;UBERON:0000916!7.65e-11!49;UBERON:0004921!8.54e-11!126;UBERON:0004185!8.54e-11!126;UBERON:0000160!3.66e-10!43;UBERON:0003929!1.87e-09!55;UBERON:0005256!8.71e-09!47;UBERON:0005409!4.91e-08!59;UBERON:0003914!5.68e-08!47;UBERON:0000490!4.78e-07!66;UBERON:0000344!5.28e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.47e-23,22;UBERON:0007499,1.47e-23,22;UBERON:0006925,1.47e-23,22;UBERON:0009497,1.47e-23,22;UBERON:0000015,1.47e-23,22;UBERON:0002423,1.47e-23,22;UBERON:0006235,1.47e-23,22;UBERON:0008835,1.47e-23,22;UBERON:0003894,1.47e-23,22;UBERON:0004161,1.47e-23,22;UBERON:0008836,1.47e-23,22;UBERON:0009854,2.26e-22,23;UBERON:0009856,2.26e-22,23;UBERON:0002365,2.74e-20,25;UBERON:0002330,2.74e-20,25;UBERON:0000160,1.65e-15,31;UBERON:0001007,5.24e-15,116;UBERON:0001555,5.24e-15,116;UBERON:0007026,5.24e-15,116;UBERON:0004119,1.24e-14,118;UBERON:0000925,1.24e-14,118;UBERON:0006595,1.24e-14,118;UBERON:0004921,3.16e-14,114;UBERON:0003929,1.82e-12,55;UBERON:0005172,8.09e-10,49;UBERON:0005173,8.09e-10,49;UBERON:0002417,8.09e-10,49;UBERON:0000916,8.09e-10,49;UBERON:0005256,1.12e-09,45;UBERON:0000490,1.23e-09,66;UBERON:0003914,4.08e-09,47;UBERON:0005409,5.02e-09,47;UBERON:0005911,5.02e-09,69;UBERON:0003104,3.61e-07,61;UBERON:0009142,3.61e-07,61 | |||
|phase1_expression=0,7.67745896806594,4.54999239389536,5.74682001482977,7.51343594919521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.23989391910769,0.68822784320151,8.6134794617253,3.01533397311352,3.44753972297422,0.570070258369122,0.504060259519861,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,25.8127163094416,14.2793980078628,20.5087212822371,28.5901623676974,32.2579358710082,9.26933172869562,0,0,0,0,0,0,0,0,0,0,19.068707913083,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,6.60837565967596,17.1892868331304,0,0,0,0.605050573870028,0.889512175379481,0.951128130562796,4.74529061544512,7.24675400785648,2.76468729680296,6.36660710531683,3.70431765526328,3.59527763461689,1.29682829924817,4.77939055810481,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0.784993639206874,2.09775178667061,42.6891783005494,0.166845105716094,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,1.2731292589071,0.863088412352432,7.29608520487659,4.11842119782122,11.5014565221884,14.5134969590716,10.6092808858951,27.5310976962352,24.3980482389801,30.3939418458921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.661227645802687,0,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.187283014939765,0.256100609619477,0.114870937911227,0,0.231768651889711,0,0,0,0,0,0,0.290692833264657,0.188218760830661,0.338458431566706,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.467863216890817,0.644613162144895,0,0,0 | |||
|short_description=p4@Bbox1 | |||
}} |
Revision as of 08:38, 6 August 2015
Short description: | p4@Bbox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Bbox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 54bp_to_NM_130452, uc008lmu.1_5end |
EntrezGene: | 170442 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.16e-10 | 25 |
hepatocyte | 5.72e-09 | 5 |
M cell of gut | 2.12e-07 | 3 |
endodermal cell | 6.44e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 1.47e-23 | 22 |
epithelial sac | 1.47e-23 | 22 |
digestive gland | 1.47e-23 | 22 |
epithelium of foregut-midgut junction | 1.47e-23 | 22 |
anatomical boundary | 1.47e-23 | 22 |
hepatobiliary system | 1.47e-23 | 22 |
foregut-midgut junction | 1.47e-23 | 22 |
hepatic diverticulum | 1.47e-23 | 22 |
liver primordium | 1.47e-23 | 22 |
septum transversum | 1.47e-23 | 22 |
liver bud | 1.47e-23 | 22 |
digestive tract diverticulum | 2.26e-22 | 23 |
sac | 2.26e-22 | 23 |
exocrine gland | 2.74e-20 | 25 |
exocrine system | 2.74e-20 | 25 |
intestine | 1.65e-15 | 31 |
digestive system | 5.24e-15 | 116 |
digestive tract | 5.24e-15 | 116 |
primitive gut | 5.24e-15 | 116 |
endoderm-derived structure | 1.24e-14 | 118 |
endoderm | 1.24e-14 | 118 |
presumptive endoderm | 1.24e-14 | 118 |
subdivision of digestive tract | 3.16e-14 | 114 |
gut epithelium | 1.82e-12 | 55 |
abdomen element | 8.09e-10 | 49 |
abdominal segment element | 8.09e-10 | 49 |
abdominal segment of trunk | 8.09e-10 | 49 |
abdomen | 8.09e-10 | 49 |
trunk mesenchyme | 1.12e-09 | 45 |
unilaminar epithelium | 1.23e-09 | 66 |
epithelial tube | 4.08e-09 | 47 |
gastrointestinal system | 5.02e-09 | 47 |
endo-epithelium | 5.02e-09 | 69 |
mesenchyme | 3.61e-07 | 61 |
entire embryonic mesenchyme | 3.61e-07 | 61 |