FFCP PHASE1:Mm9::chr13:77578273..77578319,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=80|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:77578273..77578319,-|id=chr13:77578273..77578319,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,1.64e-17,6;CL:0000556,1.64e-17,6;CL:0000050,1.89e-11,9;CL:0000107,6.37e-11,9;CL:0002027,2.57e-10,3;CL:0002006,2.57e-10,3;CL:0002024,2.57e-10,3;CL:0000839,1.03e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002410,6.37e-11,9;UBERON:0010313,2.19e-09,3;UBERON:0002342,2.19e-09,3;UBERON:0002005,2.19e-09,3;UBERON:0005428,2.19e-09,3;UBERON:0005062,2.19e-09,3;UBERON:0000010,8.07e-09,11;UBERON:0001474,1.60e-07,22;UBERON:0004765,1.60e-07,22;UBERON:0001434,1.60e-07,22;UBERON:0002204,2.24e-07,32;UBERON:0002021,2.84e-07,10;UBERON:0000411,2.84e-07,10;UBERON:0001950,2.84e-07,10|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.468129052643987,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,3.33109761815663,8.30148596298286,6.29605690315332,1.26184866143295,1.91960207048034,1.69755860719212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0,0.485510353031154,0.881277725829041,0.912392380975631,0,0,0,0,0,0,0,0,0,0,0.514518872071894,2.29226751951005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.151143120213571,2.31891590961342,0,0,0,0.649776417447669,0.448026887097336,0,1.53387290320252,1.03914401841148,2.47337702157238,0,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0,0,0,0,0.150722640552623,0.587943535678524,0,0,0,0,1.94120219936891,0,68.8522859452015,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0,0,0.90422890701429,0.544291993210623,0,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0.568326998791185,0,0,0.36012412292203,0,0,0,0.232533944750408,0,0.934122738937356,0.16455984991348,0.492502392237286,0,0,0,0,0,0,0.991256348951394,0,0.213288250535234,0.696710015581316,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0.571242563048644,0,0,0.387904974335251,0.631222379012867,0.126473074248515,0,0.156998727841375,0,0,0,0,0.449724224769707,0,0,0,0,0.486405680325106,0,2.87536413054709,1.11642284300551,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,1.10732344824387,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0.252470927204373,1.57754109708128,2.34263246577983,2.36965737506079,0.238968797952552,1.33679204449436,0,0.809621403349789,2.04579100537918,1.58115111178609,0,0.709700426041343,0.178065603667255,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0,0.295301892880773,0,0,0.727067458955011,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0,0,0,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.422190474497091,0.119372344003136,0.492422699235184,0.291480836629851,0.18542530201051,0.170870880797853,0.206386867963223,1.29636169158798,0.565105371014073,0.27338845544205,0.457556346413045,0,0.139951452323658,0,0,0,0,0,0,0,0.674321731924103,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.2604087696879,0,0,0,0,0,0,0.77952493786677,0,0,0,0.295379054349154,0,0.838274873204998,0,0.0974578807397524,0.288635524920988,0.233753804363138,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,1.12950368523413,0.460325236507177,2.86447756719698,2.06223818812425,0,3.0215755895588,0.675022500231806,3.60256962579376,0.906284817968409,0,0.726511433089237,0,0,0,0,0.367687016900028,1.11123363900808,0,0.962757628775446,0,0.25347929989024,0.377252682772152,0.655490552289177,0.192075457214608,0.459483751644906,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.441596760403192,1.71434626192708,1.06485483695602,0.238436189947321,0.436039249896986,0,0.676916863133412,0.73171189149109,0,0.950628796921032,0,0.237270036248348,0.394017929502254,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0.661774257358546,0.231867835620421|short_description=p@chr13:77578273..77578319,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=80 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:77578273..77578319,- | |||
|description=CAGE_peak_at_chr13:77578273..77578319,- | |||
|id=chr13:77578273..77578319,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.64e-17,6;CL:0000556,1.64e-17,6;CL:0000050,1.89e-11,9;CL:0000107,6.37e-11,9;CL:0002027,2.57e-10,3;CL:0002006,2.57e-10,3;CL:0002024,2.57e-10,3;CL:0000839,1.03e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,6.37e-11,9;UBERON:0010313,2.19e-09,3;UBERON:0002342,2.19e-09,3;UBERON:0002005,2.19e-09,3;UBERON:0005428,2.19e-09,3;UBERON:0005062,2.19e-09,3;UBERON:0000010,8.07e-09,11;UBERON:0001474,1.60e-07,22;UBERON:0004765,1.60e-07,22;UBERON:0001434,1.60e-07,22;UBERON:0002204,2.24e-07,32;UBERON:0002021,2.84e-07,10;UBERON:0000411,2.84e-07,10;UBERON:0001950,2.84e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.468129052643987,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,3.33109761815663,8.30148596298286,6.29605690315332,1.26184866143295,1.91960207048034,1.69755860719212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0,0.485510353031154,0.881277725829041,0.912392380975631,0,0,0,0,0,0,0,0,0,0,0.514518872071894,2.29226751951005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.151143120213571,2.31891590961342,0,0,0,0.649776417447669,0.448026887097336,0,1.53387290320252,1.03914401841148,2.47337702157238,0,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0,0,0,0,0.150722640552623,0.587943535678524,0,0,0,0,1.94120219936891,0,68.8522859452015,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0,0,0.90422890701429,0.544291993210623,0,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0.568326998791185,0,0,0.36012412292203,0,0,0,0.232533944750408,0,0.934122738937356,0.16455984991348,0.492502392237286,0,0,0,0,0,0,0.991256348951394,0,0.213288250535234,0.696710015581316,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0.571242563048644,0,0,0.387904974335251,0.631222379012867,0.126473074248515,0,0.156998727841375,0,0,0,0,0.449724224769707,0,0,0,0,0.486405680325106,0,2.87536413054709,1.11642284300551,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,1.10732344824387,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0.252470927204373,1.57754109708128,2.34263246577983,2.36965737506079,0.238968797952552,1.33679204449436,0,0.809621403349789,2.04579100537918,1.58115111178609,0,0.709700426041343,0.178065603667255,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0,0.295301892880773,0,0,0.727067458955011,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0,0,0,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.422190474497091,0.119372344003136,0.492422699235184,0.291480836629851,0.18542530201051,0.170870880797853,0.206386867963223,1.29636169158798,0.565105371014073,0.27338845544205,0.457556346413045,0,0.139951452323658,0,0,0,0,0,0,0,0.674321731924103,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.2604087696879,0,0,0,0,0,0,0.77952493786677,0,0,0,0.295379054349154,0,0.838274873204998,0,0.0974578807397524,0.288635524920988,0.233753804363138,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,1.12950368523413,0.460325236507177,2.86447756719698,2.06223818812425,0,3.0215755895588,0.675022500231806,3.60256962579376,0.906284817968409,0,0.726511433089237,0,0,0,0,0.367687016900028,1.11123363900808,0,0.962757628775446,0,0.25347929989024,0.377252682772152,0.655490552289177,0.192075457214608,0.459483751644906,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.441596760403192,1.71434626192708,1.06485483695602,0.238436189947321,0.436039249896986,0,0.676916863133412,0.73171189149109,0,0.950628796921032,0,0.237270036248348,0.394017929502254,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p@chr13:77578273..77578319,- | |||
}} |
Latest revision as of 08:27, 6 August 2015
Short description: | p@chr13:77578273..77578319, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:77578273..77578319, - |
Coexpression cluster: | MCL_coexpression_mm9:80 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.64e-17 | 6 |
megakaryocyte | 1.64e-17 | 6 |
megakaryocyte-erythroid progenitor cell | 1.89e-11 | 9 |
autonomic neuron | 6.37e-11 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 2.57e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.57e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.57e-10 | 3 |
myeloid lineage restricted progenitor cell | 1.03e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 6.37e-11 | 9 |
neural crest-derived structure | 2.19e-09 | 3 |
neural crest | 2.19e-09 | 3 |
enteric nervous system | 2.19e-09 | 3 |
vagal neural crest | 2.19e-09 | 3 |
neural fold | 2.19e-09 | 3 |
peripheral nervous system | 8.07e-09 | 11 |
bone element | 1.60e-07 | 22 |
skeletal element | 1.60e-07 | 22 |
skeletal system | 1.60e-07 | 22 |
musculoskeletal system | 2.24e-07 | 32 |
occipital lobe | 2.84e-07 | 10 |
visual cortex | 2.84e-07 | 10 |
neocortex | 2.84e-07 | 10 |