FFCP PHASE1:Mm9::chr2:105064471..105064514,+: Difference between revisions
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{{FFCP|EntrezGene=74088|HGNC=|MCL_coexpression_id=179|UniProt=Q9DCP4|association_with_transcript=0bp_to_ENSMUST00000068813,ENSMUST00000131060,NM_001159638,NM_028747,uc008lkq.2,uc008lkr.2_5end|description=CAGE_peak_1_at_0610012H03Rik_5end|id=chr2:105064471..105064514,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,6.85e-07,6;CL:0000677,6.85e-07,6;CL:0000584,6.85e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!4.73e-14!49;UBERON:0005173!4.73e-14!49;UBERON:0002417!4.73e-14!49;UBERON:0000916!4.73e-14!49;UBERON:0002107!5.95e-13!22;UBERON:0007499!5.95e-13!22;UBERON:0006925!5.95e-13!22;UBERON:0009497!5.95e-13!22;UBERON:0000015!5.95e-13!22;UBERON:0002423!5.95e-13!22;UBERON:0006235!5.95e-13!22;UBERON:0008835!5.95e-13!22;UBERON:0003894!5.95e-13!22;UBERON:0004161!5.95e-13!22;UBERON:0008836!5.95e-13!22;UBERON:0009854!7.76e-12!23;UBERON:0009856!7.76e-12!23;UBERON:0003914!2.71e-11!47;UBERON:0002365!4.69e-11!25;UBERON:0002330!4.69e-11!25;UBERON:0005177!5.78e-08!85;UBERON:0002113!2.63e-07!14;UBERON:0003918!2.63e-07!14;UBERON:0005095!2.63e-07!14;UBERON:0007687!2.63e-07!14;UBERON:0009569!3.48e-07!66;UBERON:0000466!8.69e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.18e-17,22;UBERON:0007499,1.18e-17,22;UBERON:0006925,1.18e-17,22;UBERON:0009497,1.18e-17,22;UBERON:0000015,1.18e-17,22;UBERON:0002423,1.18e-17,22;UBERON:0006235,1.18e-17,22;UBERON:0008835,1.18e-17,22;UBERON:0003894,1.18e-17,22;UBERON:0004161,1.18e-17,22;UBERON:0008836,1.18e-17,22;UBERON:0009854,1.50e-16,23;UBERON:0009856,1.50e-16,23;UBERON:0005172,2.37e-16,49;UBERON:0005173,2.37e-16,49;UBERON:0002417,2.37e-16,49;UBERON:0000916,2.37e-16,49;UBERON:0002365,7.01e-16,25;UBERON:0002330,7.01e-16,25;UBERON:0005177,2.15e-13,79;UBERON:0003104,1.14e-11,61;UBERON:0009142,1.14e-11,61;UBERON:0002100,2.66e-11,90;UBERON:0003914,6.50e-11,47;UBERON:0005256,2.91e-09,45;UBERON:0009569,2.92e-09,66;UBERON:0002113,1.18e-08,14;UBERON:0003918,1.18e-08,14;UBERON:0011143,1.18e-08,14;UBERON:0005095,1.18e-08,14;UBERON:0007687,1.18e-08,14;UBERON:0003929,2.73e-07,55;UBERON:0006554,3.36e-07,18;UBERON:0000344,6.57e-07,15|phase1_expression=0.160148847104794,18.1467211972468,18.654968814971,10.8887116070459,10.5188103288733,8.89760141133016,9.81173090501208,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,20.5804762165589,0,0,5.91971964335605,5.50582274561208,22.3950466004858,18.5227658348402,14.4365725899546,8.7410772949932,6.30075324399827,6.87364583031445,0,0,0,0,0,0,0,0,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,1.43266719969378,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,25.8127163094416,16.319312008986,23.2072372404261,25.3412802804591,32.2579358710082,41.4311039388668,0,0,0,0,0,0,0,0,0,0,43.7324259324,0.258937883647172,0,0.346970653532272,0.608930956624282,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0.494389935468748,0,0,0.161766849947409,0,0,0,0,0,0.510914110417183,2.15667224110656,3.59941638596045,1.52484272487678,0,0,0,0,0.255715457330331,0,0,1.93494791315601,1.49288364732112,9.60346482047964,0,0.130120442962704,0,0.180062129805349,0.452114453507145,0,0,0.0937017245597288,0.258703370739016,0.431135985865684,0.756424320671277,0.175951124163949,0,0,0.696504333044333,0,0.398068533636986,1.40442637462647,4.63226232806487,1.98914449576915,1.24275463521301,0.234526059981096,1.2604344302271,0.946978942340841,2.16440654922144,0.617068451549513,0.465067889500816,1.07309360559848,0.700592054203017,0.658239399653922,0.492502392237286,0.243206428637567,0.730999937126662,0,0.402619256281115,0,0.102904612379284,0,0,0.639864751605702,1.39342003116263,0.644337306610467,1.21010114774006,0.889512175379481,0.380451252225118,0.474529061544512,0.329397909448022,0.502670417600539,0.198956472041151,0.58489226135736,0,0,0,0.379335801906163,0.571242563048644,2.25415471346161,5.90588850751411,16.0980564349129,16.9027325935668,11.066393996745,45.7591458736767,56.9905382064191,63.5495394197273,23.4197575398848,1.33476084572875,1.37591296579242,2.24862112384854,2.84004169943904,3.13530307678142,4.58326533206556,6.90470729881945,6.48540907100142,14.0026320725922,8.62609239164127,12.6527922207291,11.5453939052387,13.1341016532498,26.1920223741992,16.8855232477179,0,0,0.162964976442026,0.509235257325564,0.469380496577004,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.567760340833074,0.890328018336276,0.81443479676788,0.659880491890142,5.30980553359851,0,0,3.58349651536206,4.72483028609236,2.15204603560749,2.58428293168221,1.45413491791002,2.13898427030833,5.68866164284469,4.21674434299995,4.12542172992747,0.680879211507576,0.18006109403131,0.129358683782755,0,0,0,0,0,7.50949465803873,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,1.03193433981611,0.185194527369712,0,0,0.228778173206523,3.56954702987096,3.49878630809145,2.07299960706636,0.954670618015114,0,0.406638934253697,0.324016022465404,0,0.218362563746178,0.269728692769641,1.57041565878138,0,0,1.24267862617385,0,0.299033092087958,0,0.583353565032143,0.645799117388655,0.168956125490778,0.234714477291508,0.651021924219751,0.419437377702843,0,0.864090018773596,0,0.810900861160657,0.718976700153791,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,0,6.75656911624255,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.367687016900028,1.77797382241292,0,0.64183841918363,2.27427490587418,1.52087579934144,0.943131706930381,0.655490552289177,1.53660365771686,1.37845125493472,0,1.62238056322798,1.35036454324594,1.23625770240992,1.17759136107518,2.05721551431249,0.532427418478012,0.715308569841963,0.872078499793971,1.41164070622996,1.26921911837515,1.09756783723664,1.31534855718921,0.679020569229309,1.68342681497322,1.54225523561426,0.985044823755635,1.22769312950907,1.23949472948773,0.964533054905707,0.999242311751784,1.16965804222704,2.14871054048298,0.57386499620653,0,0.695603506861264|short_description=p1@0610012H03Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74088 | |||
|HGNC= | |||
|MCL_coexpression_id=179 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9DCP4 | |||
|association_with_transcript=0bp_to_ENSMUST00000068813,ENSMUST00000131060,NM_001159638,NM_028747,uc008lkq.2,uc008lkr.2_5end | |||
|cluster_id=chr2:105064471..105064514,+ | |||
|description=CAGE_peak_1_at_0610012H03Rik_5end | |||
|id=chr2:105064471..105064514,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.85e-07,6;CL:0000677,6.85e-07,6;CL:0000584,6.85e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!4.73e-14!49;UBERON:0005173!4.73e-14!49;UBERON:0002417!4.73e-14!49;UBERON:0000916!4.73e-14!49;UBERON:0002107!5.95e-13!22;UBERON:0007499!5.95e-13!22;UBERON:0006925!5.95e-13!22;UBERON:0009497!5.95e-13!22;UBERON:0000015!5.95e-13!22;UBERON:0002423!5.95e-13!22;UBERON:0006235!5.95e-13!22;UBERON:0008835!5.95e-13!22;UBERON:0003894!5.95e-13!22;UBERON:0004161!5.95e-13!22;UBERON:0008836!5.95e-13!22;UBERON:0009854!7.76e-12!23;UBERON:0009856!7.76e-12!23;UBERON:0003914!2.71e-11!47;UBERON:0002365!4.69e-11!25;UBERON:0002330!4.69e-11!25;UBERON:0005177!5.78e-08!85;UBERON:0002113!2.63e-07!14;UBERON:0003918!2.63e-07!14;UBERON:0005095!2.63e-07!14;UBERON:0007687!2.63e-07!14;UBERON:0009569!3.48e-07!66;UBERON:0000466!8.69e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.18e-17,22;UBERON:0007499,1.18e-17,22;UBERON:0006925,1.18e-17,22;UBERON:0009497,1.18e-17,22;UBERON:0000015,1.18e-17,22;UBERON:0002423,1.18e-17,22;UBERON:0006235,1.18e-17,22;UBERON:0008835,1.18e-17,22;UBERON:0003894,1.18e-17,22;UBERON:0004161,1.18e-17,22;UBERON:0008836,1.18e-17,22;UBERON:0009854,1.50e-16,23;UBERON:0009856,1.50e-16,23;UBERON:0005172,2.37e-16,49;UBERON:0005173,2.37e-16,49;UBERON:0002417,2.37e-16,49;UBERON:0000916,2.37e-16,49;UBERON:0002365,7.01e-16,25;UBERON:0002330,7.01e-16,25;UBERON:0005177,2.15e-13,79;UBERON:0003104,1.14e-11,61;UBERON:0009142,1.14e-11,61;UBERON:0002100,2.66e-11,90;UBERON:0003914,6.50e-11,47;UBERON:0005256,2.91e-09,45;UBERON:0009569,2.92e-09,66;UBERON:0002113,1.18e-08,14;UBERON:0003918,1.18e-08,14;UBERON:0011143,1.18e-08,14;UBERON:0005095,1.18e-08,14;UBERON:0007687,1.18e-08,14;UBERON:0003929,2.73e-07,55;UBERON:0006554,3.36e-07,18;UBERON:0000344,6.57e-07,15 | |||
|phase1_expression=0.160148847104794,18.1467211972468,18.654968814971,10.8887116070459,10.5188103288733,8.89760141133016,9.81173090501208,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,20.5804762165589,0,0,5.91971964335605,5.50582274561208,22.3950466004858,18.5227658348402,14.4365725899546,8.7410772949932,6.30075324399827,6.87364583031445,0,0,0,0,0,0,0,0,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,1.43266719969378,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,25.8127163094416,16.319312008986,23.2072372404261,25.3412802804591,32.2579358710082,41.4311039388668,0,0,0,0,0,0,0,0,0,0,43.7324259324,0.258937883647172,0,0.346970653532272,0.608930956624282,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0.494389935468748,0,0,0.161766849947409,0,0,0,0,0,0.510914110417183,2.15667224110656,3.59941638596045,1.52484272487678,0,0,0,0,0.255715457330331,0,0,1.93494791315601,1.49288364732112,9.60346482047964,0,0.130120442962704,0,0.180062129805349,0.452114453507145,0,0,0.0937017245597288,0.258703370739016,0.431135985865684,0.756424320671277,0.175951124163949,0,0,0.696504333044333,0,0.398068533636986,1.40442637462647,4.63226232806487,1.98914449576915,1.24275463521301,0.234526059981096,1.2604344302271,0.946978942340841,2.16440654922144,0.617068451549513,0.465067889500816,1.07309360559848,0.700592054203017,0.658239399653922,0.492502392237286,0.243206428637567,0.730999937126662,0,0.402619256281115,0,0.102904612379284,0,0,0.639864751605702,1.39342003116263,0.644337306610467,1.21010114774006,0.889512175379481,0.380451252225118,0.474529061544512,0.329397909448022,0.502670417600539,0.198956472041151,0.58489226135736,0,0,0,0.379335801906163,0.571242563048644,2.25415471346161,5.90588850751411,16.0980564349129,16.9027325935668,11.066393996745,45.7591458736767,56.9905382064191,63.5495394197273,23.4197575398848,1.33476084572875,1.37591296579242,2.24862112384854,2.84004169943904,3.13530307678142,4.58326533206556,6.90470729881945,6.48540907100142,14.0026320725922,8.62609239164127,12.6527922207291,11.5453939052387,13.1341016532498,26.1920223741992,16.8855232477179,0,0,0.162964976442026,0.509235257325564,0.469380496577004,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.567760340833074,0.890328018336276,0.81443479676788,0.659880491890142,5.30980553359851,0,0,3.58349651536206,4.72483028609236,2.15204603560749,2.58428293168221,1.45413491791002,2.13898427030833,5.68866164284469,4.21674434299995,4.12542172992747,0.680879211507576,0.18006109403131,0.129358683782755,0,0,0,0,0,7.50949465803873,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,1.03193433981611,0.185194527369712,0,0,0.228778173206523,3.56954702987096,3.49878630809145,2.07299960706636,0.954670618015114,0,0.406638934253697,0.324016022465404,0,0.218362563746178,0.269728692769641,1.57041565878138,0,0,1.24267862617385,0,0.299033092087958,0,0.583353565032143,0.645799117388655,0.168956125490778,0.234714477291508,0.651021924219751,0.419437377702843,0,0.864090018773596,0,0.810900861160657,0.718976700153791,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,0,6.75656911624255,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.367687016900028,1.77797382241292,0,0.64183841918363,2.27427490587418,1.52087579934144,0.943131706930381,0.655490552289177,1.53660365771686,1.37845125493472,0,1.62238056322798,1.35036454324594,1.23625770240992,1.17759136107518,2.05721551431249,0.532427418478012,0.715308569841963,0.872078499793971,1.41164070622996,1.26921911837515,1.09756783723664,1.31534855718921,0.679020569229309,1.68342681497322,1.54225523561426,0.985044823755635,1.22769312950907,1.23949472948773,0.964533054905707,0.999242311751784,1.16965804222704,2.14871054048298,0.57386499620653,0,0.695603506861264 | |||
|short_description=p1@0610012H03Rik | |||
}} |
Revision as of 08:09, 6 August 2015
Short description: | p1@0610012H03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_0610012H03Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:179 |
Association with transcript: | 0bp_to_ENSMUST00000068813, ENSMUST00000131060, NM_001159638, NM_028747, uc008lkq.2, uc008lkr.2_5end |
EntrezGene: | 74088 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.85e-07 | 6 |
gut absorptive cell | 6.85e-07 | 6 |
enterocyte | 6.85e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 1.18e-17 | 22 |
epithelial sac | 1.18e-17 | 22 |
digestive gland | 1.18e-17 | 22 |
epithelium of foregut-midgut junction | 1.18e-17 | 22 |
anatomical boundary | 1.18e-17 | 22 |
hepatobiliary system | 1.18e-17 | 22 |
foregut-midgut junction | 1.18e-17 | 22 |
hepatic diverticulum | 1.18e-17 | 22 |
liver primordium | 1.18e-17 | 22 |
septum transversum | 1.18e-17 | 22 |
liver bud | 1.18e-17 | 22 |
digestive tract diverticulum | 1.50e-16 | 23 |
sac | 1.50e-16 | 23 |
abdomen element | 2.37e-16 | 49 |
abdominal segment element | 2.37e-16 | 49 |
abdominal segment of trunk | 2.37e-16 | 49 |
abdomen | 2.37e-16 | 49 |
exocrine gland | 7.01e-16 | 25 |
exocrine system | 7.01e-16 | 25 |
trunk region element | 2.15e-13 | 79 |
mesenchyme | 1.14e-11 | 61 |
entire embryonic mesenchyme | 1.14e-11 | 61 |
trunk | 2.66e-11 | 90 |
epithelial tube | 6.50e-11 | 47 |
trunk mesenchyme | 2.91e-09 | 45 |
subdivision of trunk | 2.92e-09 | 66 |
kidney | 1.18e-08 | 14 |
kidney mesenchyme | 1.18e-08 | 14 |
upper urinary tract | 1.18e-08 | 14 |
kidney rudiment | 1.18e-08 | 14 |
kidney field | 1.18e-08 | 14 |
gut epithelium | 2.73e-07 | 55 |
urinary system structure | 3.36e-07 | 18 |
mucosa | 6.57e-07 | 15 |