FFCP PHASE1:Mm9::chr3:18143267..18143276,-: Difference between revisions
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{{FFCP|EntrezGene=13123|HGNC=|MCL_coexpression_id=73|UniProt=Q60991,Q3USU4|association_with_transcript=61bp_to_ENSMUST00000035625,NM_007825,uc008orm.2_5end|description=CAGE_peak_3_at_Cyp7b1_5end|id=chr3:18143267..18143276,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,4.94e-19,5;CL:0000107,3.15e-15,9;CL:0002321,2.93e-08,70;CL:0000192,3.92e-08,3;CL:0000359,3.92e-08,3;CL:0002539,3.92e-08,3;CL:0000514,3.92e-08,3;CL:0000723,2.63e-07,91;CL:0000048,2.63e-07,91;CL:0000057,4.10e-07,1;CL:0000632,4.10e-07,1;CL:0000034,9.52e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.15e-15,9;UBERON:0000010,1.89e-12,11;UBERON:0002107,4.93e-09,22;UBERON:0007499,4.93e-09,22;UBERON:0006925,4.93e-09,22;UBERON:0009497,4.93e-09,22;UBERON:0000015,4.93e-09,22;UBERON:0002423,4.93e-09,22;UBERON:0006235,4.93e-09,22;UBERON:0008835,4.93e-09,22;UBERON:0003894,4.93e-09,22;UBERON:0004161,4.93e-09,22;UBERON:0008836,4.93e-09,22;UBERON:0009854,1.27e-08,23;UBERON:0009856,1.27e-08,23;UBERON:0000013,2.58e-08,3;UBERON:0010313,2.58e-08,3;UBERON:0002342,2.58e-08,3;UBERON:0002005,2.58e-08,3;UBERON:0005428,2.58e-08,3;UBERON:0005062,2.58e-08,3;UBERON:0001135,3.92e-08,3;UBERON:0004237,3.92e-08,3;UBERON:0004695,3.92e-08,3;UBERON:0002111,3.92e-08,3;UBERON:0004178,3.92e-08,3;UBERON:0002365,6.74e-08,25;UBERON:0002330,6.74e-08,25;UBERON:0005256,3.60e-07,45;UBERON:0003914,7.97e-07,47|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.912392380975631,1.65192076945513,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0.122490799214954,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0,0.589257170947335,0.284743361598206,0,0,0,0.579728977403356,4.30211938490693,6.79971333707751,11.3337670243942,2.59910566979068,4.92829575807069,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0,0,0,1.02765491747154,0.258937883647172,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.347648640384553,0.511430914660661,0.83115217823824,0.162241263067758,0.509196819251581,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0,0.408218994907967,0.2562274405697,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0,0.58489226135736,0,0,0.199141273254367,0.379335801906163,0.913988100877831,2.25415471346161,0.203651327845314,0.193952487167626,0.350679099451593,0.126473074248515,0.295220295959204,0,0.123397163921801,1.1858105083486,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0.488894929326078,0,0.469380496577004,0.502518772325447,0.238043640886014,0.195133647857799,0,0,0.478364305972461,0,0,0.144649058581512,0,0,0,0,0,0,0,0,1.26203287766503,2.73307121007647,0.430846795465598,1.43381278771531,0.891194696329576,0.283076530788832,0,1.46127928955656,2.37172666767914,0.321321316421807,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0.428674070063185,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0.509935289981566,0.279902904647316,0.138199973804424,0.954670618015114,0,0.203319467126849,0.540026704109006,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.515559547031063,0,1.5107877947794,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0.271608227691724,0,0.355905054372522,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p3@Cyp7b1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13123 | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q60991,uniprot:Q3USU4 | |||
|association_with_transcript=61bp_to_ENSMUST00000035625,NM_007825,uc008orm.2_5end | |||
|cluster_id=chr3:18143267..18143276,- | |||
|description=CAGE_peak_3_at_Cyp7b1_5end | |||
|id=chr3:18143267..18143276,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.94e-19,5;CL:0000107,3.15e-15,9;CL:0002321,2.93e-08,70;CL:0000192,3.92e-08,3;CL:0000359,3.92e-08,3;CL:0002539,3.92e-08,3;CL:0000514,3.92e-08,3;CL:0000723,2.63e-07,91;CL:0000048,2.63e-07,91;CL:0000057,4.10e-07,1;CL:0000632,4.10e-07,1;CL:0000034,9.52e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.15e-15,9;UBERON:0000010,1.89e-12,11;UBERON:0002107,4.93e-09,22;UBERON:0007499,4.93e-09,22;UBERON:0006925,4.93e-09,22;UBERON:0009497,4.93e-09,22;UBERON:0000015,4.93e-09,22;UBERON:0002423,4.93e-09,22;UBERON:0006235,4.93e-09,22;UBERON:0008835,4.93e-09,22;UBERON:0003894,4.93e-09,22;UBERON:0004161,4.93e-09,22;UBERON:0008836,4.93e-09,22;UBERON:0009854,1.27e-08,23;UBERON:0009856,1.27e-08,23;UBERON:0000013,2.58e-08,3;UBERON:0010313,2.58e-08,3;UBERON:0002342,2.58e-08,3;UBERON:0002005,2.58e-08,3;UBERON:0005428,2.58e-08,3;UBERON:0005062,2.58e-08,3;UBERON:0001135,3.92e-08,3;UBERON:0004237,3.92e-08,3;UBERON:0004695,3.92e-08,3;UBERON:0002111,3.92e-08,3;UBERON:0004178,3.92e-08,3;UBERON:0002365,6.74e-08,25;UBERON:0002330,6.74e-08,25;UBERON:0005256,3.60e-07,45;UBERON:0003914,7.97e-07,47 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.912392380975631,1.65192076945513,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0.122490799214954,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0,0.589257170947335,0.284743361598206,0,0,0,0.579728977403356,4.30211938490693,6.79971333707751,11.3337670243942,2.59910566979068,4.92829575807069,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0,0,0,1.02765491747154,0.258937883647172,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.347648640384553,0.511430914660661,0.83115217823824,0.162241263067758,0.509196819251581,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0,0.408218994907967,0.2562274405697,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0,0.58489226135736,0,0,0.199141273254367,0.379335801906163,0.913988100877831,2.25415471346161,0.203651327845314,0.193952487167626,0.350679099451593,0.126473074248515,0.295220295959204,0,0.123397163921801,1.1858105083486,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0.488894929326078,0,0.469380496577004,0.502518772325447,0.238043640886014,0.195133647857799,0,0,0.478364305972461,0,0,0.144649058581512,0,0,0,0,0,0,0,0,1.26203287766503,2.73307121007647,0.430846795465598,1.43381278771531,0.891194696329576,0.283076530788832,0,1.46127928955656,2.37172666767914,0.321321316421807,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0.428674070063185,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0.509935289981566,0.279902904647316,0.138199973804424,0.954670618015114,0,0.203319467126849,0.540026704109006,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.515559547031063,0,1.5107877947794,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0.271608227691724,0,0.355905054372522,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p3@Cyp7b1 | |||
}} |
Revision as of 07:17, 6 August 2015
Short description: | p3@Cyp7b1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cyp7b1_5end |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | 61bp_to_ENSMUST00000035625, NM_007825, uc008orm.2_5end |
EntrezGene: | 13123 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.94e-19 | 5 |
autonomic neuron | 3.15e-15 | 9 |
embryonic cell | 2.93e-08 | 70 |
smooth muscle cell | 3.92e-08 | 3 |
vascular associated smooth muscle cell | 3.92e-08 | 3 |
aortic smooth muscle cell | 3.92e-08 | 3 |
smooth muscle myoblast | 3.92e-08 | 3 |
somatic stem cell | 2.63e-07 | 91 |
multi fate stem cell | 2.63e-07 | 91 |
fibroblast | 4.10e-07 | 1 |
hepatic stellate cell | 4.10e-07 | 1 |
stem cell | 9.52e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 3.15e-15 | 9 |
peripheral nervous system | 1.89e-12 | 11 |
liver | 4.93e-09 | 22 |
epithelial sac | 4.93e-09 | 22 |
digestive gland | 4.93e-09 | 22 |
epithelium of foregut-midgut junction | 4.93e-09 | 22 |
anatomical boundary | 4.93e-09 | 22 |
hepatobiliary system | 4.93e-09 | 22 |
foregut-midgut junction | 4.93e-09 | 22 |
hepatic diverticulum | 4.93e-09 | 22 |
liver primordium | 4.93e-09 | 22 |
septum transversum | 4.93e-09 | 22 |
liver bud | 4.93e-09 | 22 |
digestive tract diverticulum | 1.27e-08 | 23 |
sac | 1.27e-08 | 23 |
sympathetic nervous system | 2.58e-08 | 3 |
neural crest-derived structure | 2.58e-08 | 3 |
neural crest | 2.58e-08 | 3 |
enteric nervous system | 2.58e-08 | 3 |
vagal neural crest | 2.58e-08 | 3 |
neural fold | 2.58e-08 | 3 |
smooth muscle tissue | 3.92e-08 | 3 |
blood vessel smooth muscle | 3.92e-08 | 3 |
arterial system smooth muscle | 3.92e-08 | 3 |
artery smooth muscle tissue | 3.92e-08 | 3 |
aorta smooth muscle tissue | 3.92e-08 | 3 |
exocrine gland | 6.74e-08 | 25 |
exocrine system | 6.74e-08 | 25 |
trunk mesenchyme | 3.60e-07 | 45 |
epithelial tube | 7.97e-07 | 47 |