FFCP PHASE1:Mm9::chr13:6595149..6595153,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:6595149..6595153,-|id=chr13:6595149..6595153,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,1.49e-13,3;CL:0002611,7.21e-09,2;CL:0000117,8.00e-08,23;CL:0000337,8.00e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001948,9.38e-21,5;UBERON:0002315,9.38e-21,5;UBERON:0002240,2.89e-17,6;UBERON:0005174,2.89e-17,6;UBERON:0001137,2.89e-17,6;UBERON:0002257,1.49e-13,3;UBERON:0003076,9.84e-12,12;UBERON:0003057,9.84e-12,12;UBERON:0002020,3.60e-10,34;UBERON:0002256,7.21e-09,2;UBERON:0002346,3.74e-08,64;UBERON:0003075,3.74e-08,64;UBERON:0007284,3.74e-08,64;UBERON:0010314,4.49e-08,92;UBERON:0001049,2.28e-07,52;UBERON:0005068,2.28e-07,52;UBERON:0006241,2.28e-07,52;UBERON:0007135,2.28e-07,52;UBERON:0000073,5.02e-07,54;UBERON:0010371,7.33e-07,73|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0.258246646883153,1.97104211012333,1.63845168425395,0.856089841127525,0.8774937489487,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0.0992909512008853,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0.7813353445238,0,0,0,0,0.377690453926732,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0.540023753326763,0,1.99955689082663,1.32521124570968,0.122490799214954,0.287536413054709,0,0,0.510749352340751,0.153606533256243,0.659431438650969,1.73826522844578,1.04182674111352,0,0,0.15279824777681,3.53554302568401,3.98640706237488,2.98239113320481,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0,0,0.608930956624282,0,0.150722640552623,0.23517741427141,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0.585561594023094,1.04723353406728,0.510914110417183,0.11981512450592,0,0.127070227073065,0.149790639404823,0.457500602818626,0.753926112677186,0,0.255715457330331,0,0.486723789203273,0.203678727700633,0,0,0.841767423545896,0.130120442962704,0,0.180062129805349,1.05493372485001,0.680364991513279,0.640568601424249,0.655912071918102,2.06962696591213,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0.257347907114715,0.852490498186778,0.621377317606506,1.17263029990548,0.540186184383045,0.710234206755631,1.37734962223183,0.925602677324269,1.62773761325285,0.268273401399619,0.583826711835847,0.658239399653922,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0.134206418760372,0.630869845692382,0.411618449517138,1.98251269790279,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0,0,0,0.58489226135736,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,0.321101179975584,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,1.92792789853084,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0.63549621259146,0,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,0,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0,0,0.216010681643603,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724752362478018,0.576060012515731,0,0,0.102710957164827,0,0,0,0.360586348559907,0.147689527174577,0,0,0.201652370273681,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0.179427713218951,0,0.579568782096571,0.187682475451182,0,0.643105137237198,0,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0,0.755393897389701,0,1.80128481289688,1.35942722695261,0.51776031175182,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,1.03017528619447,0.320919209591815,0.252697211763798,0,0.377252682772152,0.280924522409647,0.384150914429216,0.459483751644906,0,0.811190281613988,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,1.45346416632329,0.752875043322645,0.846146078916765,0.548783918618318,1.05227884575137,0.407412341537585,0,0.355905054372522,0,0.409231043169689,0.464810523557898,0,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr13:6595149..6595153,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:6595149..6595153,- | |||
|description=CAGE_peak_at_chr13:6595149..6595153,- | |||
|id=chr13:6595149..6595153,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.49e-13,3;CL:0002611,7.21e-09,2;CL:0000117,8.00e-08,23;CL:0000337,8.00e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,9.38e-21,5;UBERON:0002315,9.38e-21,5;UBERON:0002240,2.89e-17,6;UBERON:0005174,2.89e-17,6;UBERON:0001137,2.89e-17,6;UBERON:0002257,1.49e-13,3;UBERON:0003076,9.84e-12,12;UBERON:0003057,9.84e-12,12;UBERON:0002020,3.60e-10,34;UBERON:0002256,7.21e-09,2;UBERON:0002346,3.74e-08,64;UBERON:0003075,3.74e-08,64;UBERON:0007284,3.74e-08,64;UBERON:0010314,4.49e-08,92;UBERON:0001049,2.28e-07,52;UBERON:0005068,2.28e-07,52;UBERON:0006241,2.28e-07,52;UBERON:0007135,2.28e-07,52;UBERON:0000073,5.02e-07,54;UBERON:0010371,7.33e-07,73 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0.258246646883153,1.97104211012333,1.63845168425395,0.856089841127525,0.8774937489487,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0.0992909512008853,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0.7813353445238,0,0,0,0,0.377690453926732,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0.540023753326763,0,1.99955689082663,1.32521124570968,0.122490799214954,0.287536413054709,0,0,0.510749352340751,0.153606533256243,0.659431438650969,1.73826522844578,1.04182674111352,0,0,0.15279824777681,3.53554302568401,3.98640706237488,2.98239113320481,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0,0,0.608930956624282,0,0.150722640552623,0.23517741427141,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0.585561594023094,1.04723353406728,0.510914110417183,0.11981512450592,0,0.127070227073065,0.149790639404823,0.457500602818626,0.753926112677186,0,0.255715457330331,0,0.486723789203273,0.203678727700633,0,0,0.841767423545896,0.130120442962704,0,0.180062129805349,1.05493372485001,0.680364991513279,0.640568601424249,0.655912071918102,2.06962696591213,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0.257347907114715,0.852490498186778,0.621377317606506,1.17263029990548,0.540186184383045,0.710234206755631,1.37734962223183,0.925602677324269,1.62773761325285,0.268273401399619,0.583826711835847,0.658239399653922,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0.134206418760372,0.630869845692382,0.411618449517138,1.98251269790279,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0,0,0,0.58489226135736,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,0.321101179975584,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,1.92792789853084,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0.63549621259146,0,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,0,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0,0,0.216010681643603,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724752362478018,0.576060012515731,0,0,0.102710957164827,0,0,0,0.360586348559907,0.147689527174577,0,0,0.201652370273681,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0.179427713218951,0,0.579568782096571,0.187682475451182,0,0.643105137237198,0,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0,0.755393897389701,0,1.80128481289688,1.35942722695261,0.51776031175182,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,1.03017528619447,0.320919209591815,0.252697211763798,0,0.377252682772152,0.280924522409647,0.384150914429216,0.459483751644906,0,0.811190281613988,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,1.45346416632329,0.752875043322645,0.846146078916765,0.548783918618318,1.05227884575137,0.407412341537585,0,0.355905054372522,0,0.409231043169689,0.464810523557898,0,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr13:6595149..6595153,- | |||
}} |
Latest revision as of 06:45, 6 August 2015
Short description: | p@chr13:6595149..6595153, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:6595149..6595153, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.49e-13 | 3 |
neuron of the dorsal spinal cord | 7.21e-09 | 2 |
CNS neuron (sensu Vertebrata) | 8.00e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.00e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 9.38e-21 | 5 |
gray matter of spinal cord | 9.38e-21 | 5 |
spinal cord | 2.89e-17 | 6 |
dorsal region element | 2.89e-17 | 6 |
dorsum | 2.89e-17 | 6 |
ventral horn of spinal cord | 1.49e-13 | 3 |
posterior neural tube | 9.84e-12 | 12 |
chordal neural plate | 9.84e-12 | 12 |
gray matter | 3.60e-10 | 34 |
dorsal horn of spinal cord | 7.21e-09 | 2 |
neurectoderm | 3.74e-08 | 64 |
neural plate | 3.74e-08 | 64 |
presumptive neural plate | 3.74e-08 | 64 |
structure with developmental contribution from neural crest | 4.49e-08 | 92 |
neural tube | 2.28e-07 | 52 |
neural rod | 2.28e-07 | 52 |
future spinal cord | 2.28e-07 | 52 |
neural keel | 2.28e-07 | 52 |
regional part of nervous system | 5.02e-07 | 54 |
ecto-epithelium | 7.33e-07 | 73 |