FFCP PHASE1:Mm9::chr13:56280348..56280362,-: Difference between revisions
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{{FFCP|EntrezGene=212937|HGNC=|UniProt=Q8JZM6|association_with_transcript=-102bp_to_ENSMUST00000061504,ENSMUST00000169652,NM_001168615,NM_145976,uc007qsj.2,uc007qsk.2_5end|description=CAGE_peak_4_at_Tifab_5end|id=chr13:56280348..56280362,-|ontology_enrichment_celltype=CL:0000557!2.65e-07!7|ontology_enrichment_celltype_v019_2=CL:0000557,3.25e-16,7;CL:0000049,1.96e-14,19;CL:0000988,2.35e-10,32;CL:0002032,2.35e-10,32;CL:0000037,2.35e-10,32;CL:0000837,2.35e-10,32;CL:0002320,2.60e-10,46;CL:0000134,2.60e-10,46;CL:0002476,3.78e-10,2;CL:0000219,1.61e-08,54;CL:0000763,5.46e-07,16;CL:0002092,6.41e-07,3;CL:0002540,6.41e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.23e-07,3;DOID:4045,5.23e-07,3|ontology_enrichment_uberon=UBERON:0002371!9.68e-09!16;UBERON:0001474!2.75e-08!22;UBERON:0004765!2.75e-08!22;UBERON:0001434!2.75e-08!22;UBERON:0002193!4.09e-07!48;UBERON:0002390!9.23e-07!45;UBERON:0003061!9.23e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.28e-13,16;UBERON:0002204,9.64e-13,32;UBERON:0001474,3.01e-12,22;UBERON:0004765,3.01e-12,22;UBERON:0001434,3.01e-12,22;UBERON:0002384,2.60e-10,46;UBERON:0002193,2.13e-09,48;UBERON:0002405,2.13e-09,48;UBERON:0002390,2.51e-08,45;UBERON:0003061,2.51e-08,45;UBERON:0002106,9.82e-07,6;UBERON:0004457,9.82e-07,6;UBERON:0000042,9.82e-07,6;UBERON:0004854,9.82e-07,6;UBERON:0009034,9.82e-07,6;UBERON:0002095,9.82e-07,6;UBERON:0004782,9.82e-07,6;UBERON:0003281,9.82e-07,6;UBERON:0009664,9.82e-07,6;UBERON:0002296,9.82e-07,6;UBERON:0005602,9.82e-07,6;UBERON:0001179,9.82e-07,6;UBERON:0006293,9.82e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0,0.17008658030214,3.07801948722744,0,0.159992422793407,0,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,3.1253413780952,1.57057123192139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,1.97773272513395,2.1314403448383,0.898800331555214,0.768436610643109,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0,0.763991238884051,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.29468941823586,0.29688427812965,0,0.608930956624282,0,0.301445281105245,0,0.125666591329675,0,0,2.65383165584962,0.323533699894818,0.662524555381181,0,0,0,0,0.255457055208591,3.47463861067169,1.19980546198682,4.06624726633807,0.149790639404823,0,0,0.695297280769106,0.511430914660661,0.41557608911912,0.324482526135515,0,0.746441823660558,0,0,0.130120442962704,0,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,4.21327912387941,1.28673953557358,1.98914449576915,0,0,0,0,0,0,0,0,0.116765342367169,0.329119699826961,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0,0.464473343720877,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,2.69645822596266,0.432276099749388,0.199141273254367,0,0,0,0.203651327845314,0,0,0.189709611372772,0.295220295959204,0.31399745568275,0,0,0.333690211432188,0.589676985339609,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,0.575392274901621,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0,0.518054945597687,0,1.50791283939272,3.80733978673097,0.491764273019036,0.275936746304732,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.178065603667255,0,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0.180938774784468,0,0,0.291480836629851,0.370850604021019,0.854354403989263,1.03193433981611,1.11116716421827,0.565105371014073,0.820165366326151,1.14389086603261,0,0.279902904647316,0.414599921413271,0.954670618015114,0,0,0,0,0.218362563746178,0.539457385539283,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0.330916980914195,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.616265742988964,0.25984164595559,0,0.198681354781265,0,0,0,0.15241361331,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0.563047426353546,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,1.37016503954128,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0.50695859978048,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421|short_description=p4@Tifab}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:212937 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8JZM6 | |||
|association_with_transcript=-102bp_to_ENSMUST00000061504,ENSMUST00000169652,NM_001168615,NM_145976,uc007qsj.2,uc007qsk.2_5end | |||
|cluster_id=chr13:56280348..56280362,- | |||
|description=CAGE_peak_4_at_Tifab_5end | |||
|id=chr13:56280348..56280362,- | |||
|ontology_enrichment_celltype=CL:0000557!2.65e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.25e-16,7;CL:0000049,1.96e-14,19;CL:0000988,2.35e-10,32;CL:0002032,2.35e-10,32;CL:0000037,2.35e-10,32;CL:0000837,2.35e-10,32;CL:0002320,2.60e-10,46;CL:0000134,2.60e-10,46;CL:0002476,3.78e-10,2;CL:0000219,1.61e-08,54;CL:0000763,5.46e-07,16;CL:0002092,6.41e-07,3;CL:0002540,6.41e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.23e-07,3;DOID:4045,5.23e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002371!9.68e-09!16;UBERON:0001474!2.75e-08!22;UBERON:0004765!2.75e-08!22;UBERON:0001434!2.75e-08!22;UBERON:0002193!4.09e-07!48;UBERON:0002390!9.23e-07!45;UBERON:0003061!9.23e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.28e-13,16;UBERON:0002204,9.64e-13,32;UBERON:0001474,3.01e-12,22;UBERON:0004765,3.01e-12,22;UBERON:0001434,3.01e-12,22;UBERON:0002384,2.60e-10,46;UBERON:0002193,2.13e-09,48;UBERON:0002405,2.13e-09,48;UBERON:0002390,2.51e-08,45;UBERON:0003061,2.51e-08,45;UBERON:0002106,9.82e-07,6;UBERON:0004457,9.82e-07,6;UBERON:0000042,9.82e-07,6;UBERON:0004854,9.82e-07,6;UBERON:0009034,9.82e-07,6;UBERON:0002095,9.82e-07,6;UBERON:0004782,9.82e-07,6;UBERON:0003281,9.82e-07,6;UBERON:0009664,9.82e-07,6;UBERON:0002296,9.82e-07,6;UBERON:0005602,9.82e-07,6;UBERON:0001179,9.82e-07,6;UBERON:0006293,9.82e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0,0.17008658030214,3.07801948722744,0,0.159992422793407,0,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,3.1253413780952,1.57057123192139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,1.97773272513395,2.1314403448383,0.898800331555214,0.768436610643109,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0,0.763991238884051,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.29468941823586,0.29688427812965,0,0.608930956624282,0,0.301445281105245,0,0.125666591329675,0,0,2.65383165584962,0.323533699894818,0.662524555381181,0,0,0,0,0.255457055208591,3.47463861067169,1.19980546198682,4.06624726633807,0.149790639404823,0,0,0.695297280769106,0.511430914660661,0.41557608911912,0.324482526135515,0,0.746441823660558,0,0,0.130120442962704,0,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,4.21327912387941,1.28673953557358,1.98914449576915,0,0,0,0,0,0,0,0,0.116765342367169,0.329119699826961,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0,0.464473343720877,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,2.69645822596266,0.432276099749388,0.199141273254367,0,0,0,0.203651327845314,0,0,0.189709611372772,0.295220295959204,0.31399745568275,0,0,0.333690211432188,0.589676985339609,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,0.575392274901621,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0,0.518054945597687,0,1.50791283939272,3.80733978673097,0.491764273019036,0.275936746304732,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.178065603667255,0,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0.180938774784468,0,0,0.291480836629851,0.370850604021019,0.854354403989263,1.03193433981611,1.11116716421827,0.565105371014073,0.820165366326151,1.14389086603261,0,0.279902904647316,0.414599921413271,0.954670618015114,0,0,0,0,0.218362563746178,0.539457385539283,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0.330916980914195,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.616265742988964,0.25984164595559,0,0.198681354781265,0,0,0,0.15241361331,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0.563047426353546,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,1.37016503954128,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0.50695859978048,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p4@Tifab | |||
}} |
Revision as of 04:28, 6 August 2015
Short description: | p4@Tifab |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tifab_5end |
Coexpression cluster: | NA |
Association with transcript: | -102bp_to_ENSMUST00000061504, ENSMUST00000169652, NM_001168615, NM_145976, uc007qsj.2, uc007qsk.2_5end |
EntrezGene: | 212937 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.25e-16 | 7 |
common myeloid progenitor | 1.96e-14 | 19 |
hematopoietic cell | 2.35e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.35e-10 | 32 |
hematopoietic stem cell | 2.35e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.35e-10 | 32 |
connective tissue cell | 2.60e-10 | 46 |
mesenchymal cell | 2.60e-10 | 46 |
bone marrow macrophage | 3.78e-10 | 2 |
motile cell | 1.61e-08 | 54 |
myeloid cell | 5.46e-07 | 16 |
bone marrow cell | 6.41e-07 | 3 |
mesenchymal stem cell of the bone marrow | 6.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.28e-13 | 16 |
musculoskeletal system | 9.64e-13 | 32 |
bone element | 3.01e-12 | 22 |
skeletal element | 3.01e-12 | 22 |
skeletal system | 3.01e-12 | 22 |
connective tissue | 2.60e-10 | 46 |
hemolymphoid system | 2.13e-09 | 48 |
immune system | 2.13e-09 | 48 |
hematopoietic system | 2.51e-08 | 45 |
blood island | 2.51e-08 | 45 |
spleen | 9.82e-07 | 6 |
cavity lining | 9.82e-07 | 6 |
serous membrane | 9.82e-07 | 6 |
gastrointestinal system mesentery | 9.82e-07 | 6 |
stomach region | 9.82e-07 | 6 |
mesentery | 9.82e-07 | 6 |
gastrointestinal system serosa | 9.82e-07 | 6 |
mesentery of stomach | 9.82e-07 | 6 |
gut mesentery | 9.82e-07 | 6 |
dorsal mesentery | 9.82e-07 | 6 |
dorsal mesogastrium | 9.82e-07 | 6 |
peritoneal cavity | 9.82e-07 | 6 |
spleen primordium | 9.82e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.23e-07 | 3 |
muscle cancer | 5.23e-07 | 3 |