FFCP PHASE1:Mm9::chr8:127317391..127317414,+: Difference between revisions
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{{FFCP|EntrezGene=330863|HGNC=|UniProt=Q505D9|association_with_transcript=399bp_to_ENSMUST00000041106_5end|description=CAGE_peak_2_at_Trim67_5end|id=chr8:127317391..127317414,+|ontology_enrichment_celltype=CL:0000221!6.01e-15!44;CL:0000133!6.01e-15!44;CL:0002319!1.22e-14!43;CL:0000117!2.53e-14!23;CL:0000337!2.53e-14!23;CL:0000540!1.22e-11!33;CL:0000047!1.22e-11!33;CL:0000031!1.22e-11!33;CL:0000404!1.22e-11!33;CL:0000055!4.67e-11!50;CL:0000393!1.13e-08!39;CL:0000211!1.13e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,8.79e-23,23;CL:0000337,8.79e-23,23;CL:0002319,2.23e-16,43;CL:0000221,8.34e-16,44;CL:0000133,8.34e-16,44;CL:0000540,5.76e-15,33;CL:0000047,5.76e-15,33;CL:0000031,5.76e-15,33;CL:0000404,5.76e-15,33;CL:0000393,1.44e-11,39;CL:0000211,1.44e-11,39;CL:0002321,6.57e-07,70;CL:0002609,8.34e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.31e-21!102;UBERON:0000924!1.31e-21!102;UBERON:0006601!1.31e-21!102;UBERON:0000073!4.85e-21!75;UBERON:0001016!4.85e-21!75;UBERON:0001017!8.44e-21!73;UBERON:0005743!8.44e-21!73;UBERON:0002346!2.21e-17!71;UBERON:0003075!2.21e-17!71;UBERON:0007284!2.21e-17!71;UBERON:0001049!8.92e-16!52;UBERON:0005068!8.92e-16!52;UBERON:0006241!8.92e-16!52;UBERON:0007135!8.92e-16!52;UBERON:0000033!4.14e-15!63;UBERON:0000955!9.72e-14!50;UBERON:0006238!9.72e-14!50;UBERON:0002616!4.06e-13!49;UBERON:0002020!1.53e-12!34;UBERON:0003056!3.41e-11!49;UBERON:0003080!3.87e-09!40;UBERON:0002791!4.52e-09!29;UBERON:0003528!4.52e-09!29;UBERON:0001893!4.52e-09!29;UBERON:0002780!1.20e-08!39;UBERON:0001890!1.20e-08!39;UBERON:0006240!1.20e-08!39;UBERON:0003076!1.76e-08!12;UBERON:0003057!1.76e-08!12;UBERON:0000025!8.42e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.90e-19,73;UBERON:0001016,1.38e-18,75;UBERON:0000073,1.44e-17,54;UBERON:0001049,2.65e-16,52;UBERON:0005068,2.65e-16,52;UBERON:0006241,2.65e-16,52;UBERON:0007135,2.65e-16,52;UBERON:0004121,1.88e-15,95;UBERON:0000924,1.88e-15,95;UBERON:0006601,1.88e-15,95;UBERON:0002346,2.60e-14,64;UBERON:0003075,2.60e-14,64;UBERON:0007284,2.60e-14,64;UBERON:0003076,2.65e-13,12;UBERON:0003057,2.65e-13,12;UBERON:0002020,5.48e-13,34;UBERON:0010371,4.02e-12,73;UBERON:0000955,1.51e-11,47;UBERON:0006238,1.51e-11,47;UBERON:0002616,9.46e-11,46;UBERON:0002240,6.49e-09,6;UBERON:0005174,6.49e-09,6;UBERON:0001137,6.49e-09,6;UBERON:0003528,3.11e-08,29;UBERON:0002791,3.11e-08,29;UBERON:0001893,3.11e-08,29;UBERON:0001948,8.79e-08,5;UBERON:0002315,8.79e-08,5;UBERON:0002420,2.79e-07,8;UBERON:0007245,2.79e-07,8;UBERON:0010009,2.79e-07,8;UBERON:0010011,2.79e-07,8;UBERON:0000454,2.79e-07,8;UBERON:0003080,3.34e-07,40;UBERON:0010314,5.20e-07,92;UBERON:0003056,5.33e-07,49|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,4.17403747195497,1.55543919259427,0.979904951377538,8.62515386189829,0,0,0,0,0.286533439938757,0,3.23706337375356,3.1739458756322,3.1691570175309,0,0,0,0,0,0.599200221036809,1.92109152660777,2.38486108309499,2.16009501330705,2.73422449756797,5.42736870367227,4.63823935998388,1.71487118900936,1.0543001812006,2.75765635983006,1.10115880999389,1.91531007127782,2.15049146558741,5.27545150920775,4.48289453651807,2.6045668527838,5.02529398202486,0,1.37518422999129,7.36571463684169,5.26775218956681,5.40558392893372,0.075726193333184,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.608930956624282,0,0.452167921657868,0.470354828542819,0.251333182659351,0,13.7369389073916,0,0,0,0.484875253135222,0,14.0534782565543,18.0124167859571,0,0,0,0,2.09706895166752,1.37250180845588,3.39266750704734,0.695297280769106,0,1.87009240103604,1.94689515681309,0,0,0,0.841767423545896,0,0.459804208866946,0.900310649026746,1.05493372485001,1.56483948048054,0.768682321709099,0.843315521037559,1.81092359517311,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0.233530684734339,0,0,0.324275238183423,0.146199987425332,0,0.402619256281115,0.420579897128254,4.6307075570678,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0.744281895337007,0,0,0,0,0,0,0.325929952884052,0.509235257325564,0.469380496577004,2.68010011906905,2.14239276797412,2.34160377429359,12.2955412402829,17.0527811029557,14.1914744105164,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0,0,4.33486592967038,2.81308047821288,0,0,0,0,0.861693590931196,0,0.891194696329576,0.283076530788832,0.404810701674894,1.16902343164525,0,2.89189184779626,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0,0.713475270408282,0.329098041204242,0.913394847343798,0,0,0,1.31909002353184,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,1.35942722695261,0.51776031175182,0.415149390336707,0.399024873401031,0.682934423016537,1.45864030240976,1.04806581313991,1.65459157605013,1.55572709461131,1.23621034343337,0.64183841918363,1.26348605881899,1.77435509923168,1.69763707247469,1.68554713445788,1.02440243847791,1.09127391015665,1.90517476513229,1.27472758539341,0.964546102318525,2.06042950401653,1.17759136107518,2.40008476669791,1.4198064492747,0.715308569841963,0.872078499793971,0.470546902076653,1.01537529470012,1.46342378298218,1.05227884575137,1.49384525230448,2.24456908663095,0.830445126869219,1.37906275325789,2.04615521584845,0.464810523557898,1.15743966588685,2.24829520144151,0.233931608445408,1.07435527024149,0.765153328275374,0.220591419119515,0.695603506861264|short_description=p2@Trim67}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:330863 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q505D9 | |||
|association_with_transcript=399bp_to_ENSMUST00000041106_5end | |||
|cluster_id=chr8:127317391..127317414,+ | |||
|description=CAGE_peak_2_at_Trim67_5end | |||
|id=chr8:127317391..127317414,+ | |||
|ontology_enrichment_celltype=CL:0000221!6.01e-15!44;CL:0000133!6.01e-15!44;CL:0002319!1.22e-14!43;CL:0000117!2.53e-14!23;CL:0000337!2.53e-14!23;CL:0000540!1.22e-11!33;CL:0000047!1.22e-11!33;CL:0000031!1.22e-11!33;CL:0000404!1.22e-11!33;CL:0000055!4.67e-11!50;CL:0000393!1.13e-08!39;CL:0000211!1.13e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.79e-23,23;CL:0000337,8.79e-23,23;CL:0002319,2.23e-16,43;CL:0000221,8.34e-16,44;CL:0000133,8.34e-16,44;CL:0000540,5.76e-15,33;CL:0000047,5.76e-15,33;CL:0000031,5.76e-15,33;CL:0000404,5.76e-15,33;CL:0000393,1.44e-11,39;CL:0000211,1.44e-11,39;CL:0002321,6.57e-07,70;CL:0002609,8.34e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.31e-21!102;UBERON:0000924!1.31e-21!102;UBERON:0006601!1.31e-21!102;UBERON:0000073!4.85e-21!75;UBERON:0001016!4.85e-21!75;UBERON:0001017!8.44e-21!73;UBERON:0005743!8.44e-21!73;UBERON:0002346!2.21e-17!71;UBERON:0003075!2.21e-17!71;UBERON:0007284!2.21e-17!71;UBERON:0001049!8.92e-16!52;UBERON:0005068!8.92e-16!52;UBERON:0006241!8.92e-16!52;UBERON:0007135!8.92e-16!52;UBERON:0000033!4.14e-15!63;UBERON:0000955!9.72e-14!50;UBERON:0006238!9.72e-14!50;UBERON:0002616!4.06e-13!49;UBERON:0002020!1.53e-12!34;UBERON:0003056!3.41e-11!49;UBERON:0003080!3.87e-09!40;UBERON:0002791!4.52e-09!29;UBERON:0003528!4.52e-09!29;UBERON:0001893!4.52e-09!29;UBERON:0002780!1.20e-08!39;UBERON:0001890!1.20e-08!39;UBERON:0006240!1.20e-08!39;UBERON:0003076!1.76e-08!12;UBERON:0003057!1.76e-08!12;UBERON:0000025!8.42e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.90e-19,73;UBERON:0001016,1.38e-18,75;UBERON:0000073,1.44e-17,54;UBERON:0001049,2.65e-16,52;UBERON:0005068,2.65e-16,52;UBERON:0006241,2.65e-16,52;UBERON:0007135,2.65e-16,52;UBERON:0004121,1.88e-15,95;UBERON:0000924,1.88e-15,95;UBERON:0006601,1.88e-15,95;UBERON:0002346,2.60e-14,64;UBERON:0003075,2.60e-14,64;UBERON:0007284,2.60e-14,64;UBERON:0003076,2.65e-13,12;UBERON:0003057,2.65e-13,12;UBERON:0002020,5.48e-13,34;UBERON:0010371,4.02e-12,73;UBERON:0000955,1.51e-11,47;UBERON:0006238,1.51e-11,47;UBERON:0002616,9.46e-11,46;UBERON:0002240,6.49e-09,6;UBERON:0005174,6.49e-09,6;UBERON:0001137,6.49e-09,6;UBERON:0003528,3.11e-08,29;UBERON:0002791,3.11e-08,29;UBERON:0001893,3.11e-08,29;UBERON:0001948,8.79e-08,5;UBERON:0002315,8.79e-08,5;UBERON:0002420,2.79e-07,8;UBERON:0007245,2.79e-07,8;UBERON:0010009,2.79e-07,8;UBERON:0010011,2.79e-07,8;UBERON:0000454,2.79e-07,8;UBERON:0003080,3.34e-07,40;UBERON:0010314,5.20e-07,92;UBERON:0003056,5.33e-07,49 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,4.17403747195497,1.55543919259427,0.979904951377538,8.62515386189829,0,0,0,0,0.286533439938757,0,3.23706337375356,3.1739458756322,3.1691570175309,0,0,0,0,0,0.599200221036809,1.92109152660777,2.38486108309499,2.16009501330705,2.73422449756797,5.42736870367227,4.63823935998388,1.71487118900936,1.0543001812006,2.75765635983006,1.10115880999389,1.91531007127782,2.15049146558741,5.27545150920775,4.48289453651807,2.6045668527838,5.02529398202486,0,1.37518422999129,7.36571463684169,5.26775218956681,5.40558392893372,0.075726193333184,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.608930956624282,0,0.452167921657868,0.470354828542819,0.251333182659351,0,13.7369389073916,0,0,0,0.484875253135222,0,14.0534782565543,18.0124167859571,0,0,0,0,2.09706895166752,1.37250180845588,3.39266750704734,0.695297280769106,0,1.87009240103604,1.94689515681309,0,0,0,0.841767423545896,0,0.459804208866946,0.900310649026746,1.05493372485001,1.56483948048054,0.768682321709099,0.843315521037559,1.81092359517311,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0.233530684734339,0,0,0.324275238183423,0.146199987425332,0,0.402619256281115,0.420579897128254,4.6307075570678,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0.744281895337007,0,0,0,0,0,0,0.325929952884052,0.509235257325564,0.469380496577004,2.68010011906905,2.14239276797412,2.34160377429359,12.2955412402829,17.0527811029557,14.1914744105164,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0,0,4.33486592967038,2.81308047821288,0,0,0,0,0.861693590931196,0,0.891194696329576,0.283076530788832,0.404810701674894,1.16902343164525,0,2.89189184779626,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0,0.713475270408282,0.329098041204242,0.913394847343798,0,0,0,1.31909002353184,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,1.35942722695261,0.51776031175182,0.415149390336707,0.399024873401031,0.682934423016537,1.45864030240976,1.04806581313991,1.65459157605013,1.55572709461131,1.23621034343337,0.64183841918363,1.26348605881899,1.77435509923168,1.69763707247469,1.68554713445788,1.02440243847791,1.09127391015665,1.90517476513229,1.27472758539341,0.964546102318525,2.06042950401653,1.17759136107518,2.40008476669791,1.4198064492747,0.715308569841963,0.872078499793971,0.470546902076653,1.01537529470012,1.46342378298218,1.05227884575137,1.49384525230448,2.24456908663095,0.830445126869219,1.37906275325789,2.04615521584845,0.464810523557898,1.15743966588685,2.24829520144151,0.233931608445408,1.07435527024149,0.765153328275374,0.220591419119515,0.695603506861264 | |||
|short_description=p2@Trim67 | |||
}} |
Revision as of 03:27, 6 August 2015
Short description: | p2@Trim67 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trim67_5end |
Coexpression cluster: | NA |
Association with transcript: | 399bp_to_ENSMUST00000041106_5end |
EntrezGene: | 330863 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.79e-23 | 23 |
neuroblast (sensu Vertebrata) | 8.79e-23 | 23 |
neural cell | 2.23e-16 | 43 |
ectodermal cell | 8.34e-16 | 44 |
neurectodermal cell | 8.34e-16 | 44 |
neuron | 5.76e-15 | 33 |
neuronal stem cell | 5.76e-15 | 33 |
neuroblast | 5.76e-15 | 33 |
electrically signaling cell | 5.76e-15 | 33 |
electrically responsive cell | 1.44e-11 | 39 |
electrically active cell | 1.44e-11 | 39 |
embryonic cell | 6.57e-07 | 70 |
neuron of cerebral cortex | 8.34e-07 | 6 |