Personal tools

FFCP PHASE1:Mm9::chrX:155693835..155693844,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=110651|HGNC=|MCL_coexpression_id=3746|UniProt=B1AXN8|association_with_transcript=-12bp_to_ENSMUST00000112492_5end|description=CAGE_peak_4_at_Rps6ka3_5end|id=chrX:155693835..155693844,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.09e-07,5;UBERON:0001003,8.09e-07,5;UBERON:0002097,8.09e-07,5;UBERON:0002199,8.09e-07,5;UBERON:0007029,8.09e-07,5;UBERON:0007376,8.09e-07,5;UBERON:0002416,8.09e-07,5;UBERON:0007383,8.09e-07,5|phase1_expression=0.640595388419176,0.697950815278722,2.27499619694768,0.90739263392049,1.00179145989269,0.671517087647559,1.40167584357315,0.516493293766305,3.37892933164,3.27690336850791,0.513653904676515,0.638177271962691,1.19840510951844,0.874204024189974,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,0.17008658030214,0.198581902401771,0,0.639969691173627,0.68822784320151,1.72269589234506,0.430761996159075,1.50829862880122,0.950117097281869,0.504060259519861,0.886922042621219,0,0,0,0.288851619751275,0,0.204169356262369,1.25559489221072,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,0.125896817975577,0.202753862439029,0.734187008646726,0,0.436050312760893,0,0.194429899074283,0,0,1.00669563634642,2.90144856804538,1.34437519656986,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0.768032666281217,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.427115042397309,0.372798891650601,0.757261933331841,0.982430281388212,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0.35333957451034,1.26759077799012,0,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0.34255163915718,0.776813650941515,0.890652834388949,0.346970653532272,0,0,0.452167921657868,0.940709657085638,0.628332956648377,0.494389935468748,0.433798070759735,1.76922110389975,1.13236794963186,1.54589062922275,0.484875253135222,0,0.292780797011547,1.8850203613211,0.510914110417183,0.11981512450592,0.599902730993408,0.127070227073065,0,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,0,0.162241263067758,0.712875546952214,0.995255764880744,2.27450482590307,16.6249066150314,0.130120442962704,0,0.720248519221397,0.753524089178575,0.544291993210623,0.896796041993948,0.281105173679186,2.84573707812917,0.215567992932842,0.378212160335639,0.175951124163949,0.657587197282725,0.556094498451196,0.348252166522167,1.23469281844766,0.796137067273973,0,0.257347907114715,0,0,1.40715635988658,0.540186184383045,0.946978942340841,1.18058539048442,0.617068451549513,0.465067889500816,0.804820204198858,0.467061369468678,0.329119699826961,0,0.405344047729279,1.02339991197733,0.439100230582101,0.536825675041487,0,0,0.330418782983798,0.264450566663544,0.426576501070468,0.928946687441754,0.257734922644187,0.80673409849337,0,0.380451252225118,1.42358718463353,0.494096864172033,1.25667604400135,1.59165177632921,1.36474860983384,2.69645822596266,1.29682829924817,0.796565093017469,0.379335801906163,0.913988100877831,0,0.610953983535943,1.55161989734101,1.33258057791605,0.758838445491087,1.47610147979602,0.627994911365499,0.616985819609003,0,0,0.786235980452812,0.674586337154561,1.21716072833102,0,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0.568474235311454,1.14075483509418,1.18821560042632,0.704070744865506,1.00503754465089,0.952174563544055,1.17080188714679,0.315270288212382,1.32878813789265,1.43509291791738,0.491589944147214,1.20879487306127,2.16973587872267,0,1.08781136763742,0.983528546038072,0.551873492609465,0.321101179975584,0,0.491804836130026,1.26235463602186,0.631016438832513,0,0.215423397732799,0.716906393857656,0.445597348164788,0.566153061577665,0,0.876767573733936,1.58115111178609,0.321321316421807,0.709700426041343,0.712262414669021,0.977321756121456,0.659880491890142,2.65490276679926,0.485561272309963,0.604647113929502,0.754420319023592,0.590603785761546,0.922305443831782,0.516856586336442,0.727067458955011,0.356497378384721,1.26414703174326,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0.178368817602071,0.822745103010605,0.913394847343798,1.64270195644597,0,0.220528398054962,1.97863503529776,1.45317984026315,2.29189114726992,2.50681922406587,5.25250879184196,0.874442509889552,0,0.512612642393558,0.206386867963223,0.740778109478847,0.376736914009382,0.546776910884101,0.915112692826091,0.339956859987711,0.139951452323658,0.829199842826543,0,0.632671987162271,0.203319467126849,0.756037385752609,0.627264888043406,0.87345025498471,1.48350781023303,1.48776220305605,1.30877970992015,1.42576470620972,0,0,0.448549638131936,0.496375471371293,0,0.258319646955462,0.168956125490778,0.938857909166032,1.43224823328345,0.734015410979976,0,0,1.89606672376907,0.405450430580328,0.616265742988964,1.03936658382236,0.716106782669926,1.39076948346885,1.68273629327956,0.738447635872886,1.9183625490148,1.447929326445,1.00826185136841,1.26695244961678,1.15454209968395,0.935015217452552,0.453460767230423,0,0,0,1.15913756419314,2.43987218086537,2.01466786693992,1.50057865355346,0,1.12950368523413,0,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,1.35942722695261,0,0.726511433089237,0,0.682934423016537,0.729320151204882,0.209613162627982,0.919217542250071,0.666740183404846,1.23621034343337,0.64183841918363,1.26348605881899,0.760437899670719,0.943131706930381,0.936415074698824,1.02440243847791,1.66562859971278,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,0.883193520806384,2.40008476669791,1.59728225543404,0.238436189947321,0.872078499793971,1.59985946706062,0.676916863133412,1.82927972872773,0.789209134313529,0.814824683075171,0,1.77952527186261,1.77308068276014,1.22769312950907,1.39443157067369,1.35034627686799,0.749431733813838,0.935726433781634,0.644613162144895,0.765153328275374,1.76473135295612,1.85494268496337|short_description=p4@Rps6ka3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:110651
|HGNC=
|MCL_coexpression_id=3746
|TSSclassifier=NA
|UniProt=uniprot:B1AXN8
|association_with_transcript=-12bp_to_ENSMUST00000112492_5end
|cluster_id=chrX:155693835..155693844,+
|description=CAGE_peak_4_at_Rps6ka3_5end
|id=chrX:155693835..155693844,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.09e-07,5;UBERON:0001003,8.09e-07,5;UBERON:0002097,8.09e-07,5;UBERON:0002199,8.09e-07,5;UBERON:0007029,8.09e-07,5;UBERON:0007376,8.09e-07,5;UBERON:0002416,8.09e-07,5;UBERON:0007383,8.09e-07,5
|phase1_expression=0.640595388419176,0.697950815278722,2.27499619694768,0.90739263392049,1.00179145989269,0.671517087647559,1.40167584357315,0.516493293766305,3.37892933164,3.27690336850791,0.513653904676515,0.638177271962691,1.19840510951844,0.874204024189974,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,0.17008658030214,0.198581902401771,0,0.639969691173627,0.68822784320151,1.72269589234506,0.430761996159075,1.50829862880122,0.950117097281869,0.504060259519861,0.886922042621219,0,0,0,0.288851619751275,0,0.204169356262369,1.25559489221072,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,0.125896817975577,0.202753862439029,0.734187008646726,0,0.436050312760893,0,0.194429899074283,0,0,1.00669563634642,2.90144856804538,1.34437519656986,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0.768032666281217,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.427115042397309,0.372798891650601,0.757261933331841,0.982430281388212,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0.35333957451034,1.26759077799012,0,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0.34255163915718,0.776813650941515,0.890652834388949,0.346970653532272,0,0,0.452167921657868,0.940709657085638,0.628332956648377,0.494389935468748,0.433798070759735,1.76922110389975,1.13236794963186,1.54589062922275,0.484875253135222,0,0.292780797011547,1.8850203613211,0.510914110417183,0.11981512450592,0.599902730993408,0.127070227073065,0,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,0,0.162241263067758,0.712875546952214,0.995255764880744,2.27450482590307,16.6249066150314,0.130120442962704,0,0.720248519221397,0.753524089178575,0.544291993210623,0.896796041993948,0.281105173679186,2.84573707812917,0.215567992932842,0.378212160335639,0.175951124163949,0.657587197282725,0.556094498451196,0.348252166522167,1.23469281844766,0.796137067273973,0,0.257347907114715,0,0,1.40715635988658,0.540186184383045,0.946978942340841,1.18058539048442,0.617068451549513,0.465067889500816,0.804820204198858,0.467061369468678,0.329119699826961,0,0.405344047729279,1.02339991197733,0.439100230582101,0.536825675041487,0,0,0.330418782983798,0.264450566663544,0.426576501070468,0.928946687441754,0.257734922644187,0.80673409849337,0,0.380451252225118,1.42358718463353,0.494096864172033,1.25667604400135,1.59165177632921,1.36474860983384,2.69645822596266,1.29682829924817,0.796565093017469,0.379335801906163,0.913988100877831,0,0.610953983535943,1.55161989734101,1.33258057791605,0.758838445491087,1.47610147979602,0.627994911365499,0.616985819609003,0,0,0.786235980452812,0.674586337154561,1.21716072833102,0,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0.568474235311454,1.14075483509418,1.18821560042632,0.704070744865506,1.00503754465089,0.952174563544055,1.17080188714679,0.315270288212382,1.32878813789265,1.43509291791738,0.491589944147214,1.20879487306127,2.16973587872267,0,1.08781136763742,0.983528546038072,0.551873492609465,0.321101179975584,0,0.491804836130026,1.26235463602186,0.631016438832513,0,0.215423397732799,0.716906393857656,0.445597348164788,0.566153061577665,0,0.876767573733936,1.58115111178609,0.321321316421807,0.709700426041343,0.712262414669021,0.977321756121456,0.659880491890142,2.65490276679926,0.485561272309963,0.604647113929502,0.754420319023592,0.590603785761546,0.922305443831782,0.516856586336442,0.727067458955011,0.356497378384721,1.26414703174326,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0.178368817602071,0.822745103010605,0.913394847343798,1.64270195644597,0,0.220528398054962,1.97863503529776,1.45317984026315,2.29189114726992,2.50681922406587,5.25250879184196,0.874442509889552,0,0.512612642393558,0.206386867963223,0.740778109478847,0.376736914009382,0.546776910884101,0.915112692826091,0.339956859987711,0.139951452323658,0.829199842826543,0,0.632671987162271,0.203319467126849,0.756037385752609,0.627264888043406,0.87345025498471,1.48350781023303,1.48776220305605,1.30877970992015,1.42576470620972,0,0,0.448549638131936,0.496375471371293,0,0.258319646955462,0.168956125490778,0.938857909166032,1.43224823328345,0.734015410979976,0,0,1.89606672376907,0.405450430580328,0.616265742988964,1.03936658382236,0.716106782669926,1.39076948346885,1.68273629327956,0.738447635872886,1.9183625490148,1.447929326445,1.00826185136841,1.26695244961678,1.15454209968395,0.935015217452552,0.453460767230423,0,0,0,1.15913756419314,2.43987218086537,2.01466786693992,1.50057865355346,0,1.12950368523413,0,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,1.35942722695261,0,0.726511433089237,0,0.682934423016537,0.729320151204882,0.209613162627982,0.919217542250071,0.666740183404846,1.23621034343337,0.64183841918363,1.26348605881899,0.760437899670719,0.943131706930381,0.936415074698824,1.02440243847791,1.66562859971278,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,0.883193520806384,2.40008476669791,1.59728225543404,0.238436189947321,0.872078499793971,1.59985946706062,0.676916863133412,1.82927972872773,0.789209134313529,0.814824683075171,0,1.77952527186261,1.77308068276014,1.22769312950907,1.39443157067369,1.35034627686799,0.749431733813838,0.935726433781634,0.644613162144895,0.765153328275374,1.76473135295612,1.85494268496337
|short_description=p4@Rps6ka3
}}

Revision as of 03:07, 6 August 2015

Short description:p4@Rps6ka3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rps6ka3_5end
Coexpression cluster:MCL_coexpression_mm9:3746
Association with transcript: -12bp_to_ENSMUST00000112492_5end
EntrezGene:110651
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rps6ka3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G416.62
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H32.29
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
zone of skin8.09e-075
skin epidermis8.09e-075
skin of body8.09e-075
integument8.09e-075
surface8.09e-075
outer epithelium8.09e-075
integumental system8.09e-075
enveloping layer of ectoderm8.09e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:155693835..155693844,%2B&oldid=3972882"