FFCP PHASE1:Mm9::chr1:82583718..82583731,+: Difference between revisions
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{{FFCP|EntrezGene=12828|HGNC=|MCL_coexpression_id=305|UniProt=Q9QZS0|association_with_transcript=167bp_to_ENSMUST00000113457_5end|description=CAGE_peak_4_at_Col4a3_5end|id=chr1:82583718..82583731,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!3.42e-10!66;UBERON:0005178!7.00e-09!17;UBERON:0005181!7.00e-09!17;UBERON:0002224!7.00e-09!17;UBERON:0000915!7.00e-09!17;UBERON:0008947!7.00e-09!17;UBERON:0003258!7.00e-09!17;UBERON:0002048!2.27e-08!14;UBERON:0000117!2.27e-08!14;UBERON:0000171!2.27e-08!14;UBERON:0000170!2.27e-08!14;UBERON:0005597!2.27e-08!14;UBERON:0000118!2.27e-08!14;UBERON:0000464!1.28e-07!57;UBERON:0005177!1.79e-07!85;UBERON:0005153!3.41e-07!17;UBERON:0002113!5.71e-07!14;UBERON:0003918!5.71e-07!14;UBERON:0005095!5.71e-07!14;UBERON:0007687!5.71e-07!14;UBERON:0005157!6.19e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.10e-21,14;UBERON:0000117,5.10e-21,14;UBERON:0000171,5.10e-21,14;UBERON:0000170,5.10e-21,14;UBERON:0005597,5.10e-21,14;UBERON:0000118,5.10e-21,14;UBERON:0005178,2.89e-20,17;UBERON:0005181,2.89e-20,17;UBERON:0002224,2.89e-20,17;UBERON:0000915,2.89e-20,17;UBERON:0008947,2.89e-20,17;UBERON:0003258,2.89e-20,17;UBERON:0005153,5.67e-17,17;UBERON:0005157,3.85e-14,20;UBERON:0009569,1.14e-11,66;UBERON:0000473,2.33e-09,14;UBERON:0005177,4.06e-09,79;UBERON:0003135,1.12e-08,15;UBERON:0003101,4.45e-08,16;UBERON:0000079,4.45e-08,16;UBERON:0002113,9.44e-08,14;UBERON:0003918,9.44e-08,14;UBERON:0011143,9.44e-08,14;UBERON:0005095,9.44e-08,14;UBERON:0007687,9.44e-08,14;UBERON:0004176,1.50e-07,17;UBERON:0009196,1.50e-07,17;UBERON:0009117,1.50e-07,17;UBERON:0002100,1.54e-07,90;UBERON:0000065,3.76e-07,41;UBERON:0000991,4.41e-07,18;UBERON:0005564,4.41e-07,18;UBERON:0001004,6.23e-07,42|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0.432982082022428,1.01343946190039,0,1.59857431606684,0,0.445326417194474,0,0.608930956624282,0.230615497256059,0,0.117588707135705,1.25666591329675,0,0.433798070759735,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.81471491080253,1.24406970610093,0.758168275301024,0.841767423545896,0,0,0,0.150704817835715,0.612328492361951,0.640568601424249,0.749613796477831,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.233530684734339,0.329119699826961,0.164167464079095,1.21603214318784,1.16959989940266,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.407302655690628,0.193952487167626,1.82353131714828,10.1178459398812,13.2849133181642,11.9319033159445,11.8461277364928,0.296452627087149,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,2.77129785249907,0,0,0.509235257325564,0,1.67506257441816,2.14239276797412,5.46374214001837,5.35959489961049,5.97954662051692,5.26200736569707,4.7520361267564,6.38934432903814,6.79850575333104,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.165306911450672,0.785267825952089,0,0,1.12738587736838,0,0,0.194451188344048,0,0.506868376472335,1.29092962510329,2.8644964665669,2.9360616439199,3.14059357073808,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0.532427418478012,0,0,0,0,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0.429742108096597,0,0,0|short_description=p4@Col4a3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12828 | |||
|HGNC= | |||
|MCL_coexpression_id=305 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QZS0 | |||
|association_with_transcript=167bp_to_ENSMUST00000113457_5end | |||
|cluster_id=chr1:82583718..82583731,+ | |||
|description=CAGE_peak_4_at_Col4a3_5end | |||
|id=chr1:82583718..82583731,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!3.42e-10!66;UBERON:0005178!7.00e-09!17;UBERON:0005181!7.00e-09!17;UBERON:0002224!7.00e-09!17;UBERON:0000915!7.00e-09!17;UBERON:0008947!7.00e-09!17;UBERON:0003258!7.00e-09!17;UBERON:0002048!2.27e-08!14;UBERON:0000117!2.27e-08!14;UBERON:0000171!2.27e-08!14;UBERON:0000170!2.27e-08!14;UBERON:0005597!2.27e-08!14;UBERON:0000118!2.27e-08!14;UBERON:0000464!1.28e-07!57;UBERON:0005177!1.79e-07!85;UBERON:0005153!3.41e-07!17;UBERON:0002113!5.71e-07!14;UBERON:0003918!5.71e-07!14;UBERON:0005095!5.71e-07!14;UBERON:0007687!5.71e-07!14;UBERON:0005157!6.19e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.10e-21,14;UBERON:0000117,5.10e-21,14;UBERON:0000171,5.10e-21,14;UBERON:0000170,5.10e-21,14;UBERON:0005597,5.10e-21,14;UBERON:0000118,5.10e-21,14;UBERON:0005178,2.89e-20,17;UBERON:0005181,2.89e-20,17;UBERON:0002224,2.89e-20,17;UBERON:0000915,2.89e-20,17;UBERON:0008947,2.89e-20,17;UBERON:0003258,2.89e-20,17;UBERON:0005153,5.67e-17,17;UBERON:0005157,3.85e-14,20;UBERON:0009569,1.14e-11,66;UBERON:0000473,2.33e-09,14;UBERON:0005177,4.06e-09,79;UBERON:0003135,1.12e-08,15;UBERON:0003101,4.45e-08,16;UBERON:0000079,4.45e-08,16;UBERON:0002113,9.44e-08,14;UBERON:0003918,9.44e-08,14;UBERON:0011143,9.44e-08,14;UBERON:0005095,9.44e-08,14;UBERON:0007687,9.44e-08,14;UBERON:0004176,1.50e-07,17;UBERON:0009196,1.50e-07,17;UBERON:0009117,1.50e-07,17;UBERON:0002100,1.54e-07,90;UBERON:0000065,3.76e-07,41;UBERON:0000991,4.41e-07,18;UBERON:0005564,4.41e-07,18;UBERON:0001004,6.23e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0.432982082022428,1.01343946190039,0,1.59857431606684,0,0.445326417194474,0,0.608930956624282,0.230615497256059,0,0.117588707135705,1.25666591329675,0,0.433798070759735,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.81471491080253,1.24406970610093,0.758168275301024,0.841767423545896,0,0,0,0.150704817835715,0.612328492361951,0.640568601424249,0.749613796477831,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.233530684734339,0.329119699826961,0.164167464079095,1.21603214318784,1.16959989940266,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.407302655690628,0.193952487167626,1.82353131714828,10.1178459398812,13.2849133181642,11.9319033159445,11.8461277364928,0.296452627087149,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,2.77129785249907,0,0,0.509235257325564,0,1.67506257441816,2.14239276797412,5.46374214001837,5.35959489961049,5.97954662051692,5.26200736569707,4.7520361267564,6.38934432903814,6.79850575333104,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.165306911450672,0.785267825952089,0,0,1.12738587736838,0,0,0.194451188344048,0,0.506868376472335,1.29092962510329,2.8644964665669,2.9360616439199,3.14059357073808,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0.532427418478012,0,0,0,0,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p4@Col4a3 | |||
}} |
Revision as of 01:51, 6 August 2015
Short description: | p4@Col4a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Col4a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:305 |
Association with transcript: | 167bp_to_ENSMUST00000113457_5end |
EntrezGene: | 12828 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 5.10e-21 | 14 |
respiratory tube | 5.10e-21 | 14 |
respiration organ | 5.10e-21 | 14 |
pair of lungs | 5.10e-21 | 14 |
lung primordium | 5.10e-21 | 14 |
lung bud | 5.10e-21 | 14 |
thoracic cavity element | 2.89e-20 | 17 |
thoracic segment organ | 2.89e-20 | 17 |
thoracic cavity | 2.89e-20 | 17 |
thoracic segment of trunk | 2.89e-20 | 17 |
respiratory primordium | 2.89e-20 | 17 |
endoderm of foregut | 2.89e-20 | 17 |
epithelial bud | 5.67e-17 | 17 |
epithelial fold | 3.85e-14 | 20 |
subdivision of trunk | 1.14e-11 | 66 |
testis | 2.33e-09 | 14 |
trunk region element | 4.06e-09 | 79 |
male reproductive organ | 1.12e-08 | 15 |
male organism | 4.45e-08 | 16 |
male reproductive system | 4.45e-08 | 16 |
kidney | 9.44e-08 | 14 |
kidney mesenchyme | 9.44e-08 | 14 |
upper urinary tract | 9.44e-08 | 14 |
kidney rudiment | 9.44e-08 | 14 |
kidney field | 9.44e-08 | 14 |
external genitalia | 1.50e-07 | 17 |
indifferent external genitalia | 1.50e-07 | 17 |
indifferent gonad | 1.50e-07 | 17 |
trunk | 1.54e-07 | 90 |
respiratory tract | 3.76e-07 | 41 |
gonad | 4.41e-07 | 18 |
gonad primordium | 4.41e-07 | 18 |
respiratory system | 6.23e-07 | 42 |