FFCP PHASE1:Mm9::chr8:120807523..120807533,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12554|HGNC=|MCL_coexpression_id=3658|UniProt=Q9WTR5|association_with_transcript=-99bp_to_ENSMUST00000117160_5end|description=CAGE_peak_7_at_Cdh13_5end|id=chr8:120807523..120807533,+|ontology_enrichment_celltype=CL:0000117!1.99e-15!23;CL:0000337!1.99e-15!23;CL:0000540!2.46e-09!33;CL:0000047!2.46e-09!33;CL:0000031!2.46e-09!33;CL:0000404!2.46e-09!33;CL:0002319!9.02e-08!43;CL:0000221!1.13e-07!44;CL:0000133!1.13e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.16e-25,23;CL:0000337,2.16e-25,23;CL:0000540,2.74e-17,33;CL:0000047,2.74e-17,33;CL:0000031,2.74e-17,33;CL:0000404,2.74e-17,33;CL:0000393,1.32e-13,39;CL:0000211,1.32e-13,39;CL:0002319,5.12e-13,43;CL:0000221,1.44e-12,44;CL:0000133,1.44e-12,44;CL:0002609,5.73e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!9.02e-18!34;UBERON:0001049!4.57e-15!52;UBERON:0005068!4.57e-15!52;UBERON:0006241!4.57e-15!52;UBERON:0007135!4.57e-15!52;UBERON:0001017!1.75e-14!73;UBERON:0005743!1.75e-14!73;UBERON:0000073!2.62e-14!75;UBERON:0001016!2.62e-14!75;UBERON:0002791!5.96e-14!29;UBERON:0003528!5.96e-14!29;UBERON:0001893!5.96e-14!29;UBERON:0000955!1.55e-13!50;UBERON:0006238!1.55e-13!50;UBERON:0002616!3.75e-13!49;UBERON:0004121!1.14e-12!102;UBERON:0000924!1.14e-12!102;UBERON:0006601!1.14e-12!102;UBERON:0003080!2.77e-12!40;UBERON:0002780!5.28e-12!39;UBERON:0001890!5.28e-12!39;UBERON:0006240!5.28e-12!39;UBERON:0000033!3.04e-11!63;UBERON:0003056!8.90e-11!49;UBERON:0002346!4.93e-10!71;UBERON:0003075!4.93e-10!71;UBERON:0007284!4.93e-10!71;UBERON:0000956!6.35e-10!21;UBERON:0001869!6.35e-10!21;UBERON:0000203!6.35e-10!21;UBERON:0000025!5.47e-09!114;UBERON:0004111!1.19e-08!122;UBERON:0002619!2.72e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.28e-21,34;UBERON:0000073,1.80e-16,54;UBERON:0001017,1.34e-15,73;UBERON:0001016,6.43e-15,75;UBERON:0003528,2.35e-14,29;UBERON:0002791,2.35e-14,29;UBERON:0001893,2.35e-14,29;UBERON:0001049,9.87e-14,52;UBERON:0005068,9.87e-14,52;UBERON:0006241,9.87e-14,52;UBERON:0007135,9.87e-14,52;UBERON:0004121,2.83e-12,95;UBERON:0000924,2.83e-12,95;UBERON:0006601,2.83e-12,95;UBERON:0002780,5.50e-12,39;UBERON:0001890,5.50e-12,39;UBERON:0006240,5.50e-12,39;UBERON:0003080,1.56e-11,40;UBERON:0010371,4.13e-10,73;UBERON:0010314,7.64e-10,92;UBERON:0002346,9.64e-10,64;UBERON:0003075,9.64e-10,64;UBERON:0007284,9.64e-10,64;UBERON:0000956,1.04e-09,21;UBERON:0001869,1.04e-09,21;UBERON:0000203,1.04e-09,21;UBERON:0002616,2.94e-09,46;UBERON:0001948,5.24e-09,5;UBERON:0002315,5.24e-09,5;UBERON:0000955,6.13e-09,47;UBERON:0006238,6.13e-09,47;UBERON:0003056,2.43e-08,49;UBERON:0000025,1.35e-07,114;UBERON:0002240,2.27e-07,6;UBERON:0005174,2.27e-07,6;UBERON:0001137,2.27e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,1.58865521921416,2.08959831311148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.58328969722285,0,1.43752564364972,0,0,0,0.257259436035947,0,0,4.24864567805155,4.23192783417626,2.53532561402472,0.338844532069132,0,0,0,0,0.299600110518405,0,2.48855069540346,3.64516033495565,3.15487442027073,3.14216082844184,5.07997644188711,2.08234358665422,3.73797336971122,5.51531271966013,1.10115880999389,1.14918604276669,1.22885226604995,1.71452174049252,1.46380229763855,0.52091337055676,1.11673199600552,1.12552522006336,0.916789486660861,6.48182888042069,5.97961059356232,3.16879057903011,0.151452386666368,0.151143120213571,3.76823835312181,0,0,0,0,0,0.280888840263504,0.852151612890289,0,1.06001872353102,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,1.3013942122792,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0,0,0.748953197024114,2.74500361691176,7.91622418311046,2.25971616249959,0.511430914660661,2.49345653471472,2.27137768294861,0,0.124406970610093,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.150704817835715,0.136072998302656,0.2562274405697,0,0.258703370739016,0,0,0,0,0,1.0447564995665,0.61734640922383,0,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,1.18372367792605,0.787056926989615,1.07986979021165,1.62773761325285,1.07309360559848,1.05088808130453,0.987359099480883,1.31333971263276,1.13496333364198,0.877199924551994,1.53685080703735,0.268412837520744,0,1.74937841044784,0.330418782983798,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.923765950833023,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0.491764273019036,1.10374698521893,0.963303539926752,0.703270119553219,0,0.504941854408746,0,0,0.215423397732799,0,0.222798674082394,0,0,1.16902343164525,0,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0.608929898229199,0.23467170806371,0,0,1.48397627647332,1.29171541356724,0.904693873922338,0.596861720015682,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0.418176592028937,0.218362563746178,0.539457385539283,0.495920734352016,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.480781798079875,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0.501572104035363,2.25900737046827,0.460325236507177,2.29158205375759,2.06223818812425,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0,0.838452650511929,0.367687016900028,0.44449345560323,1.44224540067226,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,1.21733959710847,0.832326981263301,1.60819313075717,1.90517476513229,1.15884325944855,1.15745532278223,1.64834360321323,0.294397840268795,1.02860775715625,0.887379030796687,0.715308569841963,1.45346416632329,1.12931256498397,1.09998990259179,1.09756783723664,0.263069711437843,0.950628796921032,0.561142271657738,0.830445126869219,1.28055827088233,0.818462086339379,1.39443157067369,0.385813221962283,1.24905288968973,0,0.644613162144895,0.382576664137687,1.76473135295612,0.231867835620421|short_description=p7@Cdh13}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12554 | |||
|HGNC= | |||
|MCL_coexpression_id=3658 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9WTR5 | |||
|association_with_transcript=-99bp_to_ENSMUST00000117160_5end | |||
|cluster_id=chr8:120807523..120807533,+ | |||
|description=CAGE_peak_7_at_Cdh13_5end | |||
|id=chr8:120807523..120807533,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.99e-15!23;CL:0000337!1.99e-15!23;CL:0000540!2.46e-09!33;CL:0000047!2.46e-09!33;CL:0000031!2.46e-09!33;CL:0000404!2.46e-09!33;CL:0002319!9.02e-08!43;CL:0000221!1.13e-07!44;CL:0000133!1.13e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.16e-25,23;CL:0000337,2.16e-25,23;CL:0000540,2.74e-17,33;CL:0000047,2.74e-17,33;CL:0000031,2.74e-17,33;CL:0000404,2.74e-17,33;CL:0000393,1.32e-13,39;CL:0000211,1.32e-13,39;CL:0002319,5.12e-13,43;CL:0000221,1.44e-12,44;CL:0000133,1.44e-12,44;CL:0002609,5.73e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.02e-18!34;UBERON:0001049!4.57e-15!52;UBERON:0005068!4.57e-15!52;UBERON:0006241!4.57e-15!52;UBERON:0007135!4.57e-15!52;UBERON:0001017!1.75e-14!73;UBERON:0005743!1.75e-14!73;UBERON:0000073!2.62e-14!75;UBERON:0001016!2.62e-14!75;UBERON:0002791!5.96e-14!29;UBERON:0003528!5.96e-14!29;UBERON:0001893!5.96e-14!29;UBERON:0000955!1.55e-13!50;UBERON:0006238!1.55e-13!50;UBERON:0002616!3.75e-13!49;UBERON:0004121!1.14e-12!102;UBERON:0000924!1.14e-12!102;UBERON:0006601!1.14e-12!102;UBERON:0003080!2.77e-12!40;UBERON:0002780!5.28e-12!39;UBERON:0001890!5.28e-12!39;UBERON:0006240!5.28e-12!39;UBERON:0000033!3.04e-11!63;UBERON:0003056!8.90e-11!49;UBERON:0002346!4.93e-10!71;UBERON:0003075!4.93e-10!71;UBERON:0007284!4.93e-10!71;UBERON:0000956!6.35e-10!21;UBERON:0001869!6.35e-10!21;UBERON:0000203!6.35e-10!21;UBERON:0000025!5.47e-09!114;UBERON:0004111!1.19e-08!122;UBERON:0002619!2.72e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.28e-21,34;UBERON:0000073,1.80e-16,54;UBERON:0001017,1.34e-15,73;UBERON:0001016,6.43e-15,75;UBERON:0003528,2.35e-14,29;UBERON:0002791,2.35e-14,29;UBERON:0001893,2.35e-14,29;UBERON:0001049,9.87e-14,52;UBERON:0005068,9.87e-14,52;UBERON:0006241,9.87e-14,52;UBERON:0007135,9.87e-14,52;UBERON:0004121,2.83e-12,95;UBERON:0000924,2.83e-12,95;UBERON:0006601,2.83e-12,95;UBERON:0002780,5.50e-12,39;UBERON:0001890,5.50e-12,39;UBERON:0006240,5.50e-12,39;UBERON:0003080,1.56e-11,40;UBERON:0010371,4.13e-10,73;UBERON:0010314,7.64e-10,92;UBERON:0002346,9.64e-10,64;UBERON:0003075,9.64e-10,64;UBERON:0007284,9.64e-10,64;UBERON:0000956,1.04e-09,21;UBERON:0001869,1.04e-09,21;UBERON:0000203,1.04e-09,21;UBERON:0002616,2.94e-09,46;UBERON:0001948,5.24e-09,5;UBERON:0002315,5.24e-09,5;UBERON:0000955,6.13e-09,47;UBERON:0006238,6.13e-09,47;UBERON:0003056,2.43e-08,49;UBERON:0000025,1.35e-07,114;UBERON:0002240,2.27e-07,6;UBERON:0005174,2.27e-07,6;UBERON:0001137,2.27e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,1.58865521921416,2.08959831311148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.58328969722285,0,1.43752564364972,0,0,0,0.257259436035947,0,0,4.24864567805155,4.23192783417626,2.53532561402472,0.338844532069132,0,0,0,0,0.299600110518405,0,2.48855069540346,3.64516033495565,3.15487442027073,3.14216082844184,5.07997644188711,2.08234358665422,3.73797336971122,5.51531271966013,1.10115880999389,1.14918604276669,1.22885226604995,1.71452174049252,1.46380229763855,0.52091337055676,1.11673199600552,1.12552522006336,0.916789486660861,6.48182888042069,5.97961059356232,3.16879057903011,0.151452386666368,0.151143120213571,3.76823835312181,0,0,0,0,0,0.280888840263504,0.852151612890289,0,1.06001872353102,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,1.3013942122792,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0,0,0.748953197024114,2.74500361691176,7.91622418311046,2.25971616249959,0.511430914660661,2.49345653471472,2.27137768294861,0,0.124406970610093,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.150704817835715,0.136072998302656,0.2562274405697,0,0.258703370739016,0,0,0,0,0,1.0447564995665,0.61734640922383,0,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,1.18372367792605,0.787056926989615,1.07986979021165,1.62773761325285,1.07309360559848,1.05088808130453,0.987359099480883,1.31333971263276,1.13496333364198,0.877199924551994,1.53685080703735,0.268412837520744,0,1.74937841044784,0.330418782983798,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.923765950833023,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0.491764273019036,1.10374698521893,0.963303539926752,0.703270119553219,0,0.504941854408746,0,0,0.215423397732799,0,0.222798674082394,0,0,1.16902343164525,0,0.963963949265421,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0.608929898229199,0.23467170806371,0,0,1.48397627647332,1.29171541356724,0.904693873922338,0.596861720015682,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0.418176592028937,0.218362563746178,0.539457385539283,0.495920734352016,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.480781798079875,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0.501572104035363,2.25900737046827,0.460325236507177,2.29158205375759,2.06223818812425,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0,0.838452650511929,0.367687016900028,0.44449345560323,1.44224540067226,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,1.21733959710847,0.832326981263301,1.60819313075717,1.90517476513229,1.15884325944855,1.15745532278223,1.64834360321323,0.294397840268795,1.02860775715625,0.887379030796687,0.715308569841963,1.45346416632329,1.12931256498397,1.09998990259179,1.09756783723664,0.263069711437843,0.950628796921032,0.561142271657738,0.830445126869219,1.28055827088233,0.818462086339379,1.39443157067369,0.385813221962283,1.24905288968973,0,0.644613162144895,0.382576664137687,1.76473135295612,0.231867835620421 | |||
|short_description=p7@Cdh13 | |||
}} |
Revision as of 00:29, 6 August 2015
Short description: | p7@Cdh13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Cdh13_5end |
Coexpression cluster: | MCL_coexpression_mm9:3658 |
Association with transcript: | -99bp_to_ENSMUST00000117160_5end |
EntrezGene: | 12554 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.16e-25 | 23 |
neuroblast (sensu Vertebrata) | 2.16e-25 | 23 |
neuron | 2.74e-17 | 33 |
neuronal stem cell | 2.74e-17 | 33 |
neuroblast | 2.74e-17 | 33 |
electrically signaling cell | 2.74e-17 | 33 |
electrically responsive cell | 1.32e-13 | 39 |
electrically active cell | 1.32e-13 | 39 |
neural cell | 5.12e-13 | 43 |
ectodermal cell | 1.44e-12 | 44 |
neurectodermal cell | 1.44e-12 | 44 |
neuron of cerebral cortex | 5.73e-10 | 6 |