FFCP PHASE1:Mm9::chr1:74818299..74818325,+: Difference between revisions
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{{FFCP|EntrezGene=22420|HGNC=|MCL_coexpression_id=1758|UniProt=P22727|association_with_transcript=-140bp_to_ENSMUST00000006716,NM_009526,uc007bne.1_5end|description=CAGE_peak_4_at_Wnt6_5end|id=chr1:74818299..74818325,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.17e-10!18;UBERON:0005564!1.17e-10!18;UBERON:0005156!4.69e-10!26;UBERON:0000990!4.69e-10!26;UBERON:0004176!6.23e-10!17;UBERON:0009196!6.23e-10!17;UBERON:0009117!6.23e-10!17;UBERON:0003133!1.49e-09!24;UBERON:0003135!5.36e-08!15;UBERON:0003101!6.18e-08!16;UBERON:0000079!6.18e-08!16;UBERON:0000473!8.58e-08!14|ontology_enrichment_uberon_v019_2=UBERON:0000991,5.19e-27,18;UBERON:0005564,5.19e-27,18;UBERON:0004176,5.80e-25,17;UBERON:0009196,5.80e-25,17;UBERON:0009117,5.80e-25,17;UBERON:0003133,2.88e-19,24;UBERON:0000473,5.77e-19,14;UBERON:0003135,1.60e-17,15;UBERON:0005156,1.75e-17,26;UBERON:0000990,1.75e-17,26;UBERON:0003101,2.93e-16,16;UBERON:0000079,2.93e-16,16;UBERON:0002323,3.83e-11,37;UBERON:0004458,3.83e-11,37;UBERON:0003886,9.45e-11,38;UBERON:0000014,1.99e-10,5;UBERON:0001003,1.99e-10,5;UBERON:0002097,1.99e-10,5;UBERON:0002199,1.99e-10,5;UBERON:0007029,1.99e-10,5;UBERON:0007376,1.99e-10,5;UBERON:0002416,1.99e-10,5;UBERON:0007383,1.99e-10,5;UBERON:0002553,2.22e-10,39;UBERON:0000992,1.14e-07,3|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.82391344348039,0,0,0,1.81982348112971,0,0,0,0,0,0.573066879877513,0,0,0,0.633831403506179,2.03306719241479,3.55717918444456,0,0,0,2.09720077362883,1.15265491596466,0.103689612308478,0,0,0.571301968807607,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,0,0.307213066512487,0,0.0914876436024097,0,0,1.68828783009504,0.30559649555362,1.47314292736834,0.284743361598206,0.186399445825301,0,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0,0.258937883647172,1.48442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0,1.05829836422134,0.879666139307728,0.247194967734374,0.289198713839823,0,0.323533699894818,0,0,0,0,0.83778682725382,0,0,0,0,0,0,0,0.347648640384553,0,0.41557608911912,0.324482526135515,3.36069900706044,0.622034853050465,0.505445516867349,0,0.520481771850815,0.229902104433473,1.0803727788321,0.753524089178575,0.204109497453984,0.384341160854549,0.374806898238915,0,0.862271971731369,0.567318240503458,0.175951124163949,0,0.556094498451196,0.696504333044333,0.61734640922383,4.57778813682534,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0.54390568381871,0,0,0.321101179975584,0.117211686592203,0.163934945376675,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,3.40656204499845,4.98583690268315,3.90928702448583,0.989820737835213,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.905510786479282,0.428674070063185,1.06404140185364,1.42695054081656,0.822745103010605,1.2178597964584,0.469343416127421,0.847328283455281,0.220528398054962,1.31909002353184,2.26050197374268,2.29189114726992,2.02932984805332,1.47726809770555,0,0,0,0.82554747185289,0.555583582109135,0.188368457004691,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0.209088296014469,0,0.674321731924103,0.826534557253359,0,0,0,0,5.08356256549528,5.46013018508422,8.75030347548214,8.52454834953025,7.26511339610346,9.74065080759758,10.2861464026721,9.22762230946256,3.38217769156408,1.72818003754719,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.226730383615211,4.66170502085536,2.69141569828427,0.839423081820392,0,0.187682475451182,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0.755393897389701,0,0.900642406448441,0,0,0,1.19707462020309,0.682934423016537,0,0.209613162627982,0.919217542250071,0.44449345560323,0.206035057238894,0.320919209591815,1.01078884705519,0.760437899670719,0.565879024158229,0.561849044819294,0.512201219238954,0.574354689556133,0.476293691283074,1.27472758539341,1.35036454324594,0,0.441596760403192,1.37147700954166,0.887379030796687,0.476872379894642,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0,0.543216455383447,0,0.711810108745045,0.492522411877817,0,0.77468420592983,0.771626443924566,0.249810577937946,0.467863216890817,0.859484216193193,0.57386499620653,1.32354851471709,0.695603506861264|short_description=p4@Wnt6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22420 | |||
|HGNC= | |||
|MCL_coexpression_id=1758 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P22727 | |||
|association_with_transcript=-140bp_to_ENSMUST00000006716,NM_009526,uc007bne.1_5end | |||
|cluster_id=chr1:74818299..74818325,+ | |||
|description=CAGE_peak_4_at_Wnt6_5end | |||
|id=chr1:74818299..74818325,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.17e-10!18;UBERON:0005564!1.17e-10!18;UBERON:0005156!4.69e-10!26;UBERON:0000990!4.69e-10!26;UBERON:0004176!6.23e-10!17;UBERON:0009196!6.23e-10!17;UBERON:0009117!6.23e-10!17;UBERON:0003133!1.49e-09!24;UBERON:0003135!5.36e-08!15;UBERON:0003101!6.18e-08!16;UBERON:0000079!6.18e-08!16;UBERON:0000473!8.58e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,5.19e-27,18;UBERON:0005564,5.19e-27,18;UBERON:0004176,5.80e-25,17;UBERON:0009196,5.80e-25,17;UBERON:0009117,5.80e-25,17;UBERON:0003133,2.88e-19,24;UBERON:0000473,5.77e-19,14;UBERON:0003135,1.60e-17,15;UBERON:0005156,1.75e-17,26;UBERON:0000990,1.75e-17,26;UBERON:0003101,2.93e-16,16;UBERON:0000079,2.93e-16,16;UBERON:0002323,3.83e-11,37;UBERON:0004458,3.83e-11,37;UBERON:0003886,9.45e-11,38;UBERON:0000014,1.99e-10,5;UBERON:0001003,1.99e-10,5;UBERON:0002097,1.99e-10,5;UBERON:0002199,1.99e-10,5;UBERON:0007029,1.99e-10,5;UBERON:0007376,1.99e-10,5;UBERON:0002416,1.99e-10,5;UBERON:0007383,1.99e-10,5;UBERON:0002553,2.22e-10,39;UBERON:0000992,1.14e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.82391344348039,0,0,0,1.81982348112971,0,0,0,0,0,0.573066879877513,0,0,0,0.633831403506179,2.03306719241479,3.55717918444456,0,0,0,2.09720077362883,1.15265491596466,0.103689612308478,0,0,0.571301968807607,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,0,0.307213066512487,0,0.0914876436024097,0,0,1.68828783009504,0.30559649555362,1.47314292736834,0.284743361598206,0.186399445825301,0,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0,0.258937883647172,1.48442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0,1.05829836422134,0.879666139307728,0.247194967734374,0.289198713839823,0,0.323533699894818,0,0,0,0,0.83778682725382,0,0,0,0,0,0,0,0.347648640384553,0,0.41557608911912,0.324482526135515,3.36069900706044,0.622034853050465,0.505445516867349,0,0.520481771850815,0.229902104433473,1.0803727788321,0.753524089178575,0.204109497453984,0.384341160854549,0.374806898238915,0,0.862271971731369,0.567318240503458,0.175951124163949,0,0.556094498451196,0.696504333044333,0.61734640922383,4.57778813682534,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0.54390568381871,0,0,0.321101179975584,0.117211686592203,0.163934945376675,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,3.40656204499845,4.98583690268315,3.90928702448583,0.989820737835213,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.905510786479282,0.428674070063185,1.06404140185364,1.42695054081656,0.822745103010605,1.2178597964584,0.469343416127421,0.847328283455281,0.220528398054962,1.31909002353184,2.26050197374268,2.29189114726992,2.02932984805332,1.47726809770555,0,0,0,0.82554747185289,0.555583582109135,0.188368457004691,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0.209088296014469,0,0.674321731924103,0.826534557253359,0,0,0,0,5.08356256549528,5.46013018508422,8.75030347548214,8.52454834953025,7.26511339610346,9.74065080759758,10.2861464026721,9.22762230946256,3.38217769156408,1.72818003754719,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.226730383615211,4.66170502085536,2.69141569828427,0.839423081820392,0,0.187682475451182,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0.755393897389701,0,0.900642406448441,0,0,0,1.19707462020309,0.682934423016537,0,0.209613162627982,0.919217542250071,0.44449345560323,0.206035057238894,0.320919209591815,1.01078884705519,0.760437899670719,0.565879024158229,0.561849044819294,0.512201219238954,0.574354689556133,0.476293691283074,1.27472758539341,1.35036454324594,0,0.441596760403192,1.37147700954166,0.887379030796687,0.476872379894642,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0,0.543216455383447,0,0.711810108745045,0.492522411877817,0,0.77468420592983,0.771626443924566,0.249810577937946,0.467863216890817,0.859484216193193,0.57386499620653,1.32354851471709,0.695603506861264 | |||
|short_description=p4@Wnt6 | |||
}} |
Revision as of 00:20, 6 August 2015
Short description: | p4@Wnt6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Wnt6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1758 |
Association with transcript: | -140bp_to_ENSMUST00000006716, NM_009526, uc007bne.1_5end |
EntrezGene: | 22420 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 5.19e-27 | 18 |
gonad primordium | 5.19e-27 | 18 |
external genitalia | 5.80e-25 | 17 |
indifferent external genitalia | 5.80e-25 | 17 |
indifferent gonad | 5.80e-25 | 17 |
reproductive organ | 2.88e-19 | 24 |
testis | 5.77e-19 | 14 |
male reproductive organ | 1.60e-17 | 15 |
reproductive structure | 1.75e-17 | 26 |
reproductive system | 1.75e-17 | 26 |
male organism | 2.93e-16 | 16 |
male reproductive system | 2.93e-16 | 16 |
body cavity | 3.83e-11 | 37 |
body cavity or lining | 3.83e-11 | 37 |
body cavity precursor | 9.45e-11 | 38 |
zone of skin | 1.99e-10 | 5 |
skin epidermis | 1.99e-10 | 5 |
skin of body | 1.99e-10 | 5 |
integument | 1.99e-10 | 5 |
surface | 1.99e-10 | 5 |
outer epithelium | 1.99e-10 | 5 |
integumental system | 1.99e-10 | 5 |
enveloping layer of ectoderm | 1.99e-10 | 5 |
anatomical cavity | 2.22e-10 | 39 |
female gonad | 1.14e-07 | 3 |