FFCP PHASE1:Mm9::chr5:108977620..108977629,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:108977620..108977629,-|id=chr5:108977620..108977629,-|ontology_enrichment_celltype=CL:0000117!3.46e-16!23;CL:0000337!3.46e-16!23;CL:0000540!6.71e-13!33;CL:0000047!6.71e-13!33;CL:0000031!6.71e-13!33;CL:0000404!6.71e-13!33;CL:0000393!3.54e-10!39;CL:0000211!3.54e-10!39;CL:0002319!8.47e-09!43;CL:0000221!1.71e-08!44;CL:0000133!1.71e-08!44;CL:0000055!6.11e-07!50;CL:0002610!9.78e-07!3|ontology_enrichment_celltype_v019_2=CL:0002610,5.98e-13,3;CL:0000117,9.85e-13,23;CL:0000337,9.85e-13,23;CL:0002614,2.76e-12,3;CL:0002611,7.88e-09,2;CL:0000540,1.89e-08,33;CL:0000047,1.89e-08,33;CL:0000031,1.89e-08,33;CL:0000404,1.89e-08,33;CL:0000393,6.17e-07,39;CL:0000211,6.17e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.72e-33!73;UBERON:0005743!1.72e-33!73;UBERON:0001049!2.57e-33!52;UBERON:0005068!2.57e-33!52;UBERON:0006241!2.57e-33!52;UBERON:0007135!2.57e-33!52;UBERON:0000073!2.65e-32!75;UBERON:0001016!2.65e-32!75;UBERON:0002020!7.92e-32!34;UBERON:0000955!9.48e-31!50;UBERON:0006238!9.48e-31!50;UBERON:0002616!2.35e-29!49;UBERON:0000033!2.56e-27!63;UBERON:0002346!2.52e-26!71;UBERON:0003075!2.52e-26!71;UBERON:0007284!2.52e-26!71;UBERON:0004121!1.10e-24!102;UBERON:0000924!1.10e-24!102;UBERON:0006601!1.10e-24!102;UBERON:0002791!2.47e-24!29;UBERON:0003528!2.47e-24!29;UBERON:0001893!2.47e-24!29;UBERON:0003080!4.62e-21!40;UBERON:0000956!1.50e-20!21;UBERON:0001869!1.50e-20!21;UBERON:0000203!1.50e-20!21;UBERON:0002780!4.91e-20!39;UBERON:0001890!4.91e-20!39;UBERON:0006240!4.91e-20!39;UBERON:0003056!8.95e-19!49;UBERON:0002619!5.57e-18!17;UBERON:0002021!1.01e-17!10;UBERON:0000411!1.01e-17!10;UBERON:0001950!1.01e-17!10;UBERON:0007811!2.06e-17!86;UBERON:0000153!4.07e-15!94;UBERON:0003076!4.65e-13!12;UBERON:0003057!4.65e-13!12;UBERON:0002240!1.41e-10!6;UBERON:0005174!1.41e-10!6;UBERON:0001137!1.41e-10!6;UBERON:0002298!3.15e-10!6;UBERON:0000025!4.35e-10!114;UBERON:0004111!1.29e-09!122;UBERON:0001948!5.71e-09!5;UBERON:0002315!5.71e-09!5;UBERON:0002950!1.98e-07!4;UBERON:0001891!1.98e-07!4;UBERON:0009616!1.98e-07!4;UBERON:0000064!2.20e-07!99;UBERON:0004684!9.78e-07!3;UBERON:0002275!9.78e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.83e-32,54;UBERON:0002021,1.06e-30,10;UBERON:0000411,1.06e-30,10;UBERON:0001950,1.06e-30,10;UBERON:0002020,1.04e-26,34;UBERON:0001049,1.19e-26,52;UBERON:0005068,1.19e-26,52;UBERON:0006241,1.19e-26,52;UBERON:0007135,1.19e-26,52;UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0002346,4.90e-21,64;UBERON:0003075,4.90e-21,64;UBERON:0007284,4.90e-21,64;UBERON:0003528,1.80e-20,29;UBERON:0002791,1.80e-20,29;UBERON:0001893,1.80e-20,29;UBERON:0002616,1.03e-18,46;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0000955,2.96e-18,47;UBERON:0006238,2.96e-18,47;UBERON:0010371,4.96e-18,73;UBERON:0002619,1.63e-17,17;UBERON:0002780,4.43e-17,39;UBERON:0001890,4.43e-17,39;UBERON:0006240,4.43e-17,39;UBERON:0000956,5.07e-17,21;UBERON:0001869,5.07e-17,21;UBERON:0000203,5.07e-17,21;UBERON:0003080,1.37e-16,40;UBERON:0010314,1.32e-13,92;UBERON:0003056,4.41e-13,49;UBERON:0004684,5.98e-13,3;UBERON:0002275,5.98e-13,3;UBERON:0002038,2.76e-12,3;UBERON:0009663,2.76e-12,3;UBERON:0009661,2.76e-12,3;UBERON:0000125,2.76e-12,3;UBERON:0002308,2.76e-12,3;UBERON:0003076,3.44e-11,12;UBERON:0003057,3.44e-11,12;UBERON:0002240,8.46e-11,6;UBERON:0005174,8.46e-11,6;UBERON:0001137,8.46e-11,6;UBERON:0000025,2.60e-10,114;UBERON:0004111,2.10e-09,122;UBERON:0002950,2.46e-09,4;UBERON:0001891,2.46e-09,4;UBERON:0009616,2.46e-09,4;UBERON:0010286,2.46e-09,4;UBERON:0002256,7.88e-09,2;UBERON:0001948,9.70e-08,5;UBERON:0002315,9.70e-08,5;UBERON:0011216,3.78e-07,194|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,2.57085885963423,2.42955395046775,0,0.191690942036473,0.919218786610021,2.20231761998777,4.34136949489638,4.91540906419979,0,0,0,5.02529398202486,1.68828783009504,2.13917546887534,0.883885756421003,3.27454865837937,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,2.09446706813455,0,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,1.04294592115366,0.767146371990992,2.0778804455956,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:108977620..108977629,- | |||
|description=CAGE_peak_at_chr5:108977620..108977629,- | |||
|id=chr5:108977620..108977629,- | |||
|ontology_enrichment_celltype=CL:0000117!3.46e-16!23;CL:0000337!3.46e-16!23;CL:0000540!6.71e-13!33;CL:0000047!6.71e-13!33;CL:0000031!6.71e-13!33;CL:0000404!6.71e-13!33;CL:0000393!3.54e-10!39;CL:0000211!3.54e-10!39;CL:0002319!8.47e-09!43;CL:0000221!1.71e-08!44;CL:0000133!1.71e-08!44;CL:0000055!6.11e-07!50;CL:0002610!9.78e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.98e-13,3;CL:0000117,9.85e-13,23;CL:0000337,9.85e-13,23;CL:0002614,2.76e-12,3;CL:0002611,7.88e-09,2;CL:0000540,1.89e-08,33;CL:0000047,1.89e-08,33;CL:0000031,1.89e-08,33;CL:0000404,1.89e-08,33;CL:0000393,6.17e-07,39;CL:0000211,6.17e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.72e-33!73;UBERON:0005743!1.72e-33!73;UBERON:0001049!2.57e-33!52;UBERON:0005068!2.57e-33!52;UBERON:0006241!2.57e-33!52;UBERON:0007135!2.57e-33!52;UBERON:0000073!2.65e-32!75;UBERON:0001016!2.65e-32!75;UBERON:0002020!7.92e-32!34;UBERON:0000955!9.48e-31!50;UBERON:0006238!9.48e-31!50;UBERON:0002616!2.35e-29!49;UBERON:0000033!2.56e-27!63;UBERON:0002346!2.52e-26!71;UBERON:0003075!2.52e-26!71;UBERON:0007284!2.52e-26!71;UBERON:0004121!1.10e-24!102;UBERON:0000924!1.10e-24!102;UBERON:0006601!1.10e-24!102;UBERON:0002791!2.47e-24!29;UBERON:0003528!2.47e-24!29;UBERON:0001893!2.47e-24!29;UBERON:0003080!4.62e-21!40;UBERON:0000956!1.50e-20!21;UBERON:0001869!1.50e-20!21;UBERON:0000203!1.50e-20!21;UBERON:0002780!4.91e-20!39;UBERON:0001890!4.91e-20!39;UBERON:0006240!4.91e-20!39;UBERON:0003056!8.95e-19!49;UBERON:0002619!5.57e-18!17;UBERON:0002021!1.01e-17!10;UBERON:0000411!1.01e-17!10;UBERON:0001950!1.01e-17!10;UBERON:0007811!2.06e-17!86;UBERON:0000153!4.07e-15!94;UBERON:0003076!4.65e-13!12;UBERON:0003057!4.65e-13!12;UBERON:0002240!1.41e-10!6;UBERON:0005174!1.41e-10!6;UBERON:0001137!1.41e-10!6;UBERON:0002298!3.15e-10!6;UBERON:0000025!4.35e-10!114;UBERON:0004111!1.29e-09!122;UBERON:0001948!5.71e-09!5;UBERON:0002315!5.71e-09!5;UBERON:0002950!1.98e-07!4;UBERON:0001891!1.98e-07!4;UBERON:0009616!1.98e-07!4;UBERON:0000064!2.20e-07!99;UBERON:0004684!9.78e-07!3;UBERON:0002275!9.78e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.83e-32,54;UBERON:0002021,1.06e-30,10;UBERON:0000411,1.06e-30,10;UBERON:0001950,1.06e-30,10;UBERON:0002020,1.04e-26,34;UBERON:0001049,1.19e-26,52;UBERON:0005068,1.19e-26,52;UBERON:0006241,1.19e-26,52;UBERON:0007135,1.19e-26,52;UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0002346,4.90e-21,64;UBERON:0003075,4.90e-21,64;UBERON:0007284,4.90e-21,64;UBERON:0003528,1.80e-20,29;UBERON:0002791,1.80e-20,29;UBERON:0001893,1.80e-20,29;UBERON:0002616,1.03e-18,46;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0000955,2.96e-18,47;UBERON:0006238,2.96e-18,47;UBERON:0010371,4.96e-18,73;UBERON:0002619,1.63e-17,17;UBERON:0002780,4.43e-17,39;UBERON:0001890,4.43e-17,39;UBERON:0006240,4.43e-17,39;UBERON:0000956,5.07e-17,21;UBERON:0001869,5.07e-17,21;UBERON:0000203,5.07e-17,21;UBERON:0003080,1.37e-16,40;UBERON:0010314,1.32e-13,92;UBERON:0003056,4.41e-13,49;UBERON:0004684,5.98e-13,3;UBERON:0002275,5.98e-13,3;UBERON:0002038,2.76e-12,3;UBERON:0009663,2.76e-12,3;UBERON:0009661,2.76e-12,3;UBERON:0000125,2.76e-12,3;UBERON:0002308,2.76e-12,3;UBERON:0003076,3.44e-11,12;UBERON:0003057,3.44e-11,12;UBERON:0002240,8.46e-11,6;UBERON:0005174,8.46e-11,6;UBERON:0001137,8.46e-11,6;UBERON:0000025,2.60e-10,114;UBERON:0004111,2.10e-09,122;UBERON:0002950,2.46e-09,4;UBERON:0001891,2.46e-09,4;UBERON:0009616,2.46e-09,4;UBERON:0010286,2.46e-09,4;UBERON:0002256,7.88e-09,2;UBERON:0001948,9.70e-08,5;UBERON:0002315,9.70e-08,5;UBERON:0011216,3.78e-07,194 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,2.57085885963423,2.42955395046775,0,0.191690942036473,0.919218786610021,2.20231761998777,4.34136949489638,4.91540906419979,0,0,0,5.02529398202486,1.68828783009504,2.13917546887534,0.883885756421003,3.27454865837937,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,2.09446706813455,0,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,1.04294592115366,0.767146371990992,2.0778804455956,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,2.76195141904306,3.43737308063638,1.89038500578056,6.16574267793578,3.0215755895588,1.35004500046361,3.15224842256954,3.62513927187364,2.07104124700728,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr5:108977620..108977629,- | |||
}} |
Latest revision as of 00:03, 6 August 2015
Short description: | p@chr5:108977620..108977629, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:108977620..108977629, - |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.98e-13 | 3 |
CNS neuron (sensu Vertebrata) | 9.85e-13 | 23 |
neuroblast (sensu Vertebrata) | 9.85e-13 | 23 |
neuron of the substantia nigra | 2.76e-12 | 3 |
neuron of the dorsal spinal cord | 7.88e-09 | 2 |
neuron | 1.89e-08 | 33 |
neuronal stem cell | 1.89e-08 | 33 |
neuroblast | 1.89e-08 | 33 |
electrically signaling cell | 1.89e-08 | 33 |
electrically responsive cell | 6.17e-07 | 39 |
electrically active cell | 6.17e-07 | 39 |