FFCP PHASE1:Mm9::chr5:108954538..108954559,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:108954538..108954559,-|id=chr5:108954538..108954559,-|ontology_enrichment_celltype=CL:0000117!8.76e-19!23;CL:0000337!8.76e-19!23;CL:0000540!3.45e-11!33;CL:0000047!3.45e-11!33;CL:0000031!3.45e-11!33;CL:0000404!3.45e-11!33;CL:0000393!1.44e-08!39;CL:0000211!1.44e-08!39;CL:0000221!1.67e-08!44;CL:0000133!1.67e-08!44;CL:0002319!5.27e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-15,23;CL:0000337,1.87e-15,23;CL:0000540,6.47e-10,33;CL:0000047,6.47e-10,33;CL:0000031,6.47e-10,33;CL:0000404,6.47e-10,33;CL:0002610,1.10e-08,3;CL:0002614,4.59e-08,3;CL:0000393,5.72e-08,39;CL:0000211,5.72e-08,39;CL:0002612,1.24e-07,3;CL:0002319,5.59e-07,43;CL:0000221,9.25e-07,44;CL:0000133,9.25e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.78e-33!52;UBERON:0005068!8.78e-33!52;UBERON:0006241!8.78e-33!52;UBERON:0007135!8.78e-33!52;UBERON:0000073!1.20e-30!75;UBERON:0001016!1.20e-30!75;UBERON:0000955!1.32e-30!50;UBERON:0006238!1.32e-30!50;UBERON:0001017!1.37e-30!73;UBERON:0005743!1.37e-30!73;UBERON:0000033!6.34e-30!63;UBERON:0002616!2.56e-29!49;UBERON:0002346!4.43e-28!71;UBERON:0003075!4.43e-28!71;UBERON:0007284!4.43e-28!71;UBERON:0002020!2.66e-27!34;UBERON:0004121!6.20e-26!102;UBERON:0000924!6.20e-26!102;UBERON:0006601!6.20e-26!102;UBERON:0003056!2.23e-23!49;UBERON:0003080!1.18e-22!40;UBERON:0002780!1.40e-21!39;UBERON:0001890!1.40e-21!39;UBERON:0006240!1.40e-21!39;UBERON:0002791!2.23e-21!29;UBERON:0003528!2.23e-21!29;UBERON:0001893!2.23e-21!29;UBERON:0007811!2.79e-18!86;UBERON:0000956!1.24e-15!21;UBERON:0001869!1.24e-15!21;UBERON:0000203!1.24e-15!21;UBERON:0000153!1.33e-15!94;UBERON:0002021!3.98e-14!10;UBERON:0000411!3.98e-14!10;UBERON:0001950!3.98e-14!10;UBERON:0002619!1.05e-13!17;UBERON:0003076!1.79e-10!12;UBERON:0003057!1.79e-10!12;UBERON:0000025!6.55e-09!114;UBERON:0002240!1.35e-08!6;UBERON:0005174!1.35e-08!6;UBERON:0001137!1.35e-08!6;UBERON:0002298!1.62e-08!6;UBERON:0004111!3.85e-08!122;UBERON:0001948!2.77e-07!5;UBERON:0002315!2.77e-07!5;UBERON:0002420!6.75e-07!8;UBERON:0007245!6.75e-07!8;UBERON:0010009!6.75e-07!8;UBERON:0010011!6.75e-07!8;UBERON:0000454!6.75e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.63e-41,54;UBERON:0001049,2.57e-37,52;UBERON:0005068,2.57e-37,52;UBERON:0006241,2.57e-37,52;UBERON:0007135,2.57e-37,52;UBERON:0001017,7.47e-36,73;UBERON:0001016,1.03e-34,75;UBERON:0002020,5.03e-31,34;UBERON:0002346,4.16e-29,64;UBERON:0003075,4.16e-29,64;UBERON:0007284,4.16e-29,64;UBERON:0000955,6.78e-28,47;UBERON:0006238,6.78e-28,47;UBERON:0002616,5.38e-26,46;UBERON:0004121,5.90e-26,95;UBERON:0000924,5.90e-26,95;UBERON:0006601,5.90e-26,95;UBERON:0002021,5.12e-25,10;UBERON:0000411,5.12e-25,10;UBERON:0001950,5.12e-25,10;UBERON:0010371,1.02e-24,73;UBERON:0003528,1.88e-21,29;UBERON:0002791,1.88e-21,29;UBERON:0001893,1.88e-21,29;UBERON:0003080,1.55e-20,40;UBERON:0003076,5.44e-19,12;UBERON:0003057,5.44e-19,12;UBERON:0002780,5.81e-19,39;UBERON:0001890,5.81e-19,39;UBERON:0006240,5.81e-19,39;UBERON:0010314,2.90e-18,92;UBERON:0000956,7.16e-18,21;UBERON:0001869,7.16e-18,21;UBERON:0000203,7.16e-18,21;UBERON:0002619,1.76e-16,17;UBERON:0003056,6.67e-16,49;UBERON:0002240,1.10e-14,6;UBERON:0005174,1.10e-14,6;UBERON:0001137,1.10e-14,6;UBERON:0000025,1.79e-13,114;UBERON:0001948,3.04e-12,5;UBERON:0002315,3.04e-12,5;UBERON:0004111,3.69e-12,122;UBERON:0002950,4.52e-10,4;UBERON:0001891,4.52e-10,4;UBERON:0009616,4.52e-10,4;UBERON:0010286,4.52e-10,4;UBERON:0011216,4.42e-09,194;UBERON:0004684,1.10e-08,3;UBERON:0002275,1.10e-08,3;UBERON:0002038,4.59e-08,3;UBERON:0009663,4.59e-08,3;UBERON:0009661,4.59e-08,3;UBERON:0000125,4.59e-08,3;UBERON:0002308,4.59e-08,3;UBERON:0002257,1.24e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,1.62007125998029,0,6.56997264128748,4.8591079009355,0.61245399607477,0.287536413054709,0,2.20231761998777,10.9811110753261,13.3637683932932,0.131886287730194,0.640413505216868,0,11.4465029590566,1.68828783009504,4.12555268997387,4.71405736757868,4.12877874317399,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,4.60782754989601,0,0,0,0,3.44518470631092,2.28750301409313,0.125654352112864,2.43354048269187,1.79000820131231,4.36354893575076,1.78465389374533,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,6.10092241953609,4.57125577709592,0,0,0,0,0,0,0,0,0,0,0,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,5.9842280745933,6.87474616127276,4.29632955859219,8.90607275701835,6.0431511791176,4.72515750162264,5.40385443869065,9.06284817968409,8.28416498802912,0.207574695168353,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr5:108954538..108954559,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:108954538..108954559,- | |||
|description=CAGE_peak_at_chr5:108954538..108954559,- | |||
|id=chr5:108954538..108954559,- | |||
|ontology_enrichment_celltype=CL:0000117!8.76e-19!23;CL:0000337!8.76e-19!23;CL:0000540!3.45e-11!33;CL:0000047!3.45e-11!33;CL:0000031!3.45e-11!33;CL:0000404!3.45e-11!33;CL:0000393!1.44e-08!39;CL:0000211!1.44e-08!39;CL:0000221!1.67e-08!44;CL:0000133!1.67e-08!44;CL:0002319!5.27e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-15,23;CL:0000337,1.87e-15,23;CL:0000540,6.47e-10,33;CL:0000047,6.47e-10,33;CL:0000031,6.47e-10,33;CL:0000404,6.47e-10,33;CL:0002610,1.10e-08,3;CL:0002614,4.59e-08,3;CL:0000393,5.72e-08,39;CL:0000211,5.72e-08,39;CL:0002612,1.24e-07,3;CL:0002319,5.59e-07,43;CL:0000221,9.25e-07,44;CL:0000133,9.25e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.78e-33!52;UBERON:0005068!8.78e-33!52;UBERON:0006241!8.78e-33!52;UBERON:0007135!8.78e-33!52;UBERON:0000073!1.20e-30!75;UBERON:0001016!1.20e-30!75;UBERON:0000955!1.32e-30!50;UBERON:0006238!1.32e-30!50;UBERON:0001017!1.37e-30!73;UBERON:0005743!1.37e-30!73;UBERON:0000033!6.34e-30!63;UBERON:0002616!2.56e-29!49;UBERON:0002346!4.43e-28!71;UBERON:0003075!4.43e-28!71;UBERON:0007284!4.43e-28!71;UBERON:0002020!2.66e-27!34;UBERON:0004121!6.20e-26!102;UBERON:0000924!6.20e-26!102;UBERON:0006601!6.20e-26!102;UBERON:0003056!2.23e-23!49;UBERON:0003080!1.18e-22!40;UBERON:0002780!1.40e-21!39;UBERON:0001890!1.40e-21!39;UBERON:0006240!1.40e-21!39;UBERON:0002791!2.23e-21!29;UBERON:0003528!2.23e-21!29;UBERON:0001893!2.23e-21!29;UBERON:0007811!2.79e-18!86;UBERON:0000956!1.24e-15!21;UBERON:0001869!1.24e-15!21;UBERON:0000203!1.24e-15!21;UBERON:0000153!1.33e-15!94;UBERON:0002021!3.98e-14!10;UBERON:0000411!3.98e-14!10;UBERON:0001950!3.98e-14!10;UBERON:0002619!1.05e-13!17;UBERON:0003076!1.79e-10!12;UBERON:0003057!1.79e-10!12;UBERON:0000025!6.55e-09!114;UBERON:0002240!1.35e-08!6;UBERON:0005174!1.35e-08!6;UBERON:0001137!1.35e-08!6;UBERON:0002298!1.62e-08!6;UBERON:0004111!3.85e-08!122;UBERON:0001948!2.77e-07!5;UBERON:0002315!2.77e-07!5;UBERON:0002420!6.75e-07!8;UBERON:0007245!6.75e-07!8;UBERON:0010009!6.75e-07!8;UBERON:0010011!6.75e-07!8;UBERON:0000454!6.75e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.63e-41,54;UBERON:0001049,2.57e-37,52;UBERON:0005068,2.57e-37,52;UBERON:0006241,2.57e-37,52;UBERON:0007135,2.57e-37,52;UBERON:0001017,7.47e-36,73;UBERON:0001016,1.03e-34,75;UBERON:0002020,5.03e-31,34;UBERON:0002346,4.16e-29,64;UBERON:0003075,4.16e-29,64;UBERON:0007284,4.16e-29,64;UBERON:0000955,6.78e-28,47;UBERON:0006238,6.78e-28,47;UBERON:0002616,5.38e-26,46;UBERON:0004121,5.90e-26,95;UBERON:0000924,5.90e-26,95;UBERON:0006601,5.90e-26,95;UBERON:0002021,5.12e-25,10;UBERON:0000411,5.12e-25,10;UBERON:0001950,5.12e-25,10;UBERON:0010371,1.02e-24,73;UBERON:0003528,1.88e-21,29;UBERON:0002791,1.88e-21,29;UBERON:0001893,1.88e-21,29;UBERON:0003080,1.55e-20,40;UBERON:0003076,5.44e-19,12;UBERON:0003057,5.44e-19,12;UBERON:0002780,5.81e-19,39;UBERON:0001890,5.81e-19,39;UBERON:0006240,5.81e-19,39;UBERON:0010314,2.90e-18,92;UBERON:0000956,7.16e-18,21;UBERON:0001869,7.16e-18,21;UBERON:0000203,7.16e-18,21;UBERON:0002619,1.76e-16,17;UBERON:0003056,6.67e-16,49;UBERON:0002240,1.10e-14,6;UBERON:0005174,1.10e-14,6;UBERON:0001137,1.10e-14,6;UBERON:0000025,1.79e-13,114;UBERON:0001948,3.04e-12,5;UBERON:0002315,3.04e-12,5;UBERON:0004111,3.69e-12,122;UBERON:0002950,4.52e-10,4;UBERON:0001891,4.52e-10,4;UBERON:0009616,4.52e-10,4;UBERON:0010286,4.52e-10,4;UBERON:0011216,4.42e-09,194;UBERON:0004684,1.10e-08,3;UBERON:0002275,1.10e-08,3;UBERON:0002038,4.59e-08,3;UBERON:0009663,4.59e-08,3;UBERON:0009661,4.59e-08,3;UBERON:0000125,4.59e-08,3;UBERON:0002308,4.59e-08,3;UBERON:0002257,1.24e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,1.62007125998029,0,6.56997264128748,4.8591079009355,0.61245399607477,0.287536413054709,0,2.20231761998777,10.9811110753261,13.3637683932932,0.131886287730194,0.640413505216868,0,11.4465029590566,1.68828783009504,4.12555268997387,4.71405736757868,4.12877874317399,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.46390398505774,4.60782754989601,0,0,0,0,3.44518470631092,2.28750301409313,0.125654352112864,2.43354048269187,1.79000820131231,4.36354893575076,1.78465389374533,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,6.10092241953609,4.57125577709592,0,0,0,0,0,0,0,0,0,0,0,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,5.9842280745933,6.87474616127276,4.29632955859219,8.90607275701835,6.0431511791176,4.72515750162264,5.40385443869065,9.06284817968409,8.28416498802912,0.207574695168353,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:108954538..108954559,- | |||
}} |
Latest revision as of 00:02, 6 August 2015
Short description: | p@chr5:108954538..108954559, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:108954538..108954559, - |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.87e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.87e-15 | 23 |
neuron | 6.47e-10 | 33 |
neuronal stem cell | 6.47e-10 | 33 |
neuroblast | 6.47e-10 | 33 |
electrically signaling cell | 6.47e-10 | 33 |
raphe nuclei neuron | 1.10e-08 | 3 |
neuron of the substantia nigra | 4.59e-08 | 3 |
electrically responsive cell | 5.72e-08 | 39 |
electrically active cell | 5.72e-08 | 39 |
neuron of the ventral spinal cord | 1.24e-07 | 3 |
neural cell | 5.59e-07 | 43 |
ectodermal cell | 9.25e-07 | 44 |
neurectodermal cell | 9.25e-07 | 44 |