FFCP PHASE1:Mm9::chr13:42147117..42147142,+: Difference between revisions
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{{FFCP|EntrezGene=110521|HGNC=|MCL_coexpression_id=60|UniProt=F8VPM9,Q03172|association_with_transcript=-247bp_to_ENSMUST00000060148,NM_007772,uc007qfk.1_5end|description=CAGE_peak_3_at_Hivep1_5end|id=chr13:42147117..42147142,+|ontology_enrichment_celltype=CL:0000117!1.04e-16!23;CL:0000337!1.04e-16!23;CL:0000540!1.26e-10!33;CL:0000047!1.26e-10!33;CL:0000031!1.26e-10!33;CL:0000404!1.26e-10!33;CL:0000393!1.17e-07!39;CL:0000211!1.17e-07!39;CL:0000221!3.46e-07!44;CL:0000133!3.46e-07!44;CL:0002319!3.54e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.56e-38,23;CL:0000337,6.56e-38,23;CL:0000540,8.16e-25,33;CL:0000047,8.16e-25,33;CL:0000031,8.16e-25,33;CL:0000404,8.16e-25,33;CL:0000393,3.46e-20,39;CL:0000211,3.46e-20,39;CL:0002319,7.98e-18,43;CL:0000221,2.66e-17,44;CL:0000133,2.66e-17,44;CL:0002609,2.64e-12,6;CL:0002321,5.36e-09,70;CL:0002613,2.04e-08,3;CL:0000120,1.42e-07,3;CL:0002612,1.57e-07,3;CL:0002608,6.28e-07,3;CL:0002610,7.98e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.66e-18!52;UBERON:0005068!3.66e-18!52;UBERON:0006241!3.66e-18!52;UBERON:0007135!3.66e-18!52;UBERON:0002020!4.82e-18!34;UBERON:0000033!1.78e-17!63;UBERON:0000955!4.14e-17!50;UBERON:0006238!4.14e-17!50;UBERON:0002616!1.70e-16!49;UBERON:0001017!2.41e-16!73;UBERON:0005743!2.41e-16!73;UBERON:0000073!2.64e-16!75;UBERON:0001016!2.64e-16!75;UBERON:0002346!3.06e-16!71;UBERON:0003075!3.06e-16!71;UBERON:0007284!3.06e-16!71;UBERON:0002791!1.17e-14!29;UBERON:0003528!1.17e-14!29;UBERON:0001893!1.17e-14!29;UBERON:0004121!2.41e-14!102;UBERON:0000924!2.41e-14!102;UBERON:0006601!2.41e-14!102;UBERON:0003056!3.28e-14!49;UBERON:0003080!8.36e-13!40;UBERON:0002780!1.81e-12!39;UBERON:0001890!1.81e-12!39;UBERON:0006240!1.81e-12!39;UBERON:0000956!4.63e-11!21;UBERON:0001869!4.63e-11!21;UBERON:0000203!4.63e-11!21;UBERON:0007811!2.72e-10!86;UBERON:0000153!1.27e-09!94;UBERON:0002619!1.76e-08!17;UBERON:0002021!9.61e-08!10;UBERON:0000411!9.61e-08!10;UBERON:0001950!9.61e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.66e-35,34;UBERON:0000073,3.99e-30,54;UBERON:0001017,7.95e-28,73;UBERON:0001016,7.05e-27,75;UBERON:0003528,2.37e-26,29;UBERON:0002791,2.37e-26,29;UBERON:0001893,2.37e-26,29;UBERON:0001049,6.64e-25,52;UBERON:0005068,6.64e-25,52;UBERON:0006241,6.64e-25,52;UBERON:0007135,6.64e-25,52;UBERON:0000956,4.90e-23,21;UBERON:0001869,4.90e-23,21;UBERON:0000203,4.90e-23,21;UBERON:0004121,1.36e-19,95;UBERON:0000924,1.36e-19,95;UBERON:0006601,1.36e-19,95;UBERON:0000955,1.42e-19,47;UBERON:0006238,1.42e-19,47;UBERON:0002346,5.28e-19,64;UBERON:0003075,5.28e-19,64;UBERON:0007284,5.28e-19,64;UBERON:0002780,2.65e-18,39;UBERON:0001890,2.65e-18,39;UBERON:0006240,2.65e-18,39;UBERON:0002616,2.90e-18,46;UBERON:0003080,1.01e-17,40;UBERON:0002619,4.50e-16,17;UBERON:0010371,7.40e-16,73;UBERON:0003056,1.47e-13,49;UBERON:0002021,2.46e-13,10;UBERON:0000411,2.46e-13,10;UBERON:0001950,2.46e-13,10;UBERON:0010314,2.98e-11,92;UBERON:0001948,1.24e-10,5;UBERON:0002315,1.24e-10,5;UBERON:0002240,8.44e-09,6;UBERON:0005174,8.44e-09,6;UBERON:0001137,8.44e-09,6;UBERON:0000025,1.14e-08,114;UBERON:0003076,8.43e-08,12;UBERON:0003057,8.43e-08,12;UBERON:0004111,1.11e-07,122;UBERON:0002257,1.57e-07,3;UBERON:0004684,7.98e-07,3;UBERON:0002275,7.98e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.174840804837995,0.333109761815663,0,0.699561878128147,0,0.137114433605739,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,1.65903379693564,1.62007125998029,1.47227472945967,1.14260393761521,1.10434270475807,1.5923803897944,1.15014565221884,1.83843757322004,2.20231761998777,1.40456071893706,1.0752457327937,4.87979264601717,6.77008562657831,4.68822033501084,0.837548997004143,1.68828783009504,0.763991238884051,1.47314292736834,2.13557521198654,3.72798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0,0,1.75668478206928,0.41889341362691,0.255457055208591,0,0.599902730993408,0,0.449371918214468,0,0.879580464790051,1.91206752211504,0.767146371990992,0.83115217823824,0.162241263067758,0.305518091550949,0.124406970610093,0.252722758433675,0,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,0.612328492361951,0.384341160854549,0.937017245597288,0.258703370739016,0.215567992932842,0,0.351902248327898,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0,0,0.630869845692382,1.02904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,1.10732344824387,0.478364305972461,0.327726629431476,0,0.144649058581512,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,1.28528526568723,0,0,0.488660878060728,0.329940245945071,0,0,0,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.388076051348264,0,0,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0.32977250588296,0.322928853391811,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0.474503990371703,0,0.216010681643603,0,0,0,0,0.26175594198403,0,0,15.7834022831573,0.149516546043979,0,0,0,0.337912250981556,0.469428954583016,0.2604087696879,0.419437377702843,3.62376181239009,4.89651010638371,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,2.30162618253588,0.572895513439397,1.20297227640581,1.37016503954128,1.5107877947794,0.675022500231806,3.60256962579376,2.71885445390523,4.14208249401456,0.207574695168353,0,0.512200817262403,0.972426868273176,0.838452650511929,0.735374033800057,0.44449345560323,1.03017528619447,0.64183841918363,0.505394423527595,0.25347929989024,0,0.37456602987953,0.512201219238954,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0.476872379894642,0.145346416632329,0.470546902076653,0.338458431566706,0,1.05227884575137,0.271608227691724,0.561142271657738,0.593175090620871,0.197008964751127,0.409231043169689,0.309873682371932,0.578719832943424,1.99848462350357,0.233931608445408,0.644613162144895,0,0.220591419119515,0|short_description=p3@Hivep1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:110521 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8VPM9,uniprot:Q03172 | |||
|association_with_transcript=-247bp_to_ENSMUST00000060148,NM_007772,uc007qfk.1_5end | |||
|cluster_id=chr13:42147117..42147142,+ | |||
|description=CAGE_peak_3_at_Hivep1_5end | |||
|id=chr13:42147117..42147142,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.04e-16!23;CL:0000337!1.04e-16!23;CL:0000540!1.26e-10!33;CL:0000047!1.26e-10!33;CL:0000031!1.26e-10!33;CL:0000404!1.26e-10!33;CL:0000393!1.17e-07!39;CL:0000211!1.17e-07!39;CL:0000221!3.46e-07!44;CL:0000133!3.46e-07!44;CL:0002319!3.54e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.56e-38,23;CL:0000337,6.56e-38,23;CL:0000540,8.16e-25,33;CL:0000047,8.16e-25,33;CL:0000031,8.16e-25,33;CL:0000404,8.16e-25,33;CL:0000393,3.46e-20,39;CL:0000211,3.46e-20,39;CL:0002319,7.98e-18,43;CL:0000221,2.66e-17,44;CL:0000133,2.66e-17,44;CL:0002609,2.64e-12,6;CL:0002321,5.36e-09,70;CL:0002613,2.04e-08,3;CL:0000120,1.42e-07,3;CL:0002612,1.57e-07,3;CL:0002608,6.28e-07,3;CL:0002610,7.98e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.66e-18!52;UBERON:0005068!3.66e-18!52;UBERON:0006241!3.66e-18!52;UBERON:0007135!3.66e-18!52;UBERON:0002020!4.82e-18!34;UBERON:0000033!1.78e-17!63;UBERON:0000955!4.14e-17!50;UBERON:0006238!4.14e-17!50;UBERON:0002616!1.70e-16!49;UBERON:0001017!2.41e-16!73;UBERON:0005743!2.41e-16!73;UBERON:0000073!2.64e-16!75;UBERON:0001016!2.64e-16!75;UBERON:0002346!3.06e-16!71;UBERON:0003075!3.06e-16!71;UBERON:0007284!3.06e-16!71;UBERON:0002791!1.17e-14!29;UBERON:0003528!1.17e-14!29;UBERON:0001893!1.17e-14!29;UBERON:0004121!2.41e-14!102;UBERON:0000924!2.41e-14!102;UBERON:0006601!2.41e-14!102;UBERON:0003056!3.28e-14!49;UBERON:0003080!8.36e-13!40;UBERON:0002780!1.81e-12!39;UBERON:0001890!1.81e-12!39;UBERON:0006240!1.81e-12!39;UBERON:0000956!4.63e-11!21;UBERON:0001869!4.63e-11!21;UBERON:0000203!4.63e-11!21;UBERON:0007811!2.72e-10!86;UBERON:0000153!1.27e-09!94;UBERON:0002619!1.76e-08!17;UBERON:0002021!9.61e-08!10;UBERON:0000411!9.61e-08!10;UBERON:0001950!9.61e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.66e-35,34;UBERON:0000073,3.99e-30,54;UBERON:0001017,7.95e-28,73;UBERON:0001016,7.05e-27,75;UBERON:0003528,2.37e-26,29;UBERON:0002791,2.37e-26,29;UBERON:0001893,2.37e-26,29;UBERON:0001049,6.64e-25,52;UBERON:0005068,6.64e-25,52;UBERON:0006241,6.64e-25,52;UBERON:0007135,6.64e-25,52;UBERON:0000956,4.90e-23,21;UBERON:0001869,4.90e-23,21;UBERON:0000203,4.90e-23,21;UBERON:0004121,1.36e-19,95;UBERON:0000924,1.36e-19,95;UBERON:0006601,1.36e-19,95;UBERON:0000955,1.42e-19,47;UBERON:0006238,1.42e-19,47;UBERON:0002346,5.28e-19,64;UBERON:0003075,5.28e-19,64;UBERON:0007284,5.28e-19,64;UBERON:0002780,2.65e-18,39;UBERON:0001890,2.65e-18,39;UBERON:0006240,2.65e-18,39;UBERON:0002616,2.90e-18,46;UBERON:0003080,1.01e-17,40;UBERON:0002619,4.50e-16,17;UBERON:0010371,7.40e-16,73;UBERON:0003056,1.47e-13,49;UBERON:0002021,2.46e-13,10;UBERON:0000411,2.46e-13,10;UBERON:0001950,2.46e-13,10;UBERON:0010314,2.98e-11,92;UBERON:0001948,1.24e-10,5;UBERON:0002315,1.24e-10,5;UBERON:0002240,8.44e-09,6;UBERON:0005174,8.44e-09,6;UBERON:0001137,8.44e-09,6;UBERON:0000025,1.14e-08,114;UBERON:0003076,8.43e-08,12;UBERON:0003057,8.43e-08,12;UBERON:0004111,1.11e-07,122;UBERON:0002257,1.57e-07,3;UBERON:0004684,7.98e-07,3;UBERON:0002275,7.98e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.174840804837995,0.333109761815663,0,0.699561878128147,0,0.137114433605739,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,1.65903379693564,1.62007125998029,1.47227472945967,1.14260393761521,1.10434270475807,1.5923803897944,1.15014565221884,1.83843757322004,2.20231761998777,1.40456071893706,1.0752457327937,4.87979264601717,6.77008562657831,4.68822033501084,0.837548997004143,1.68828783009504,0.763991238884051,1.47314292736834,2.13557521198654,3.72798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0,0,1.75668478206928,0.41889341362691,0.255457055208591,0,0.599902730993408,0,0.449371918214468,0,0.879580464790051,1.91206752211504,0.767146371990992,0.83115217823824,0.162241263067758,0.305518091550949,0.124406970610093,0.252722758433675,0,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,0.612328492361951,0.384341160854549,0.937017245597288,0.258703370739016,0.215567992932842,0,0.351902248327898,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0,0,0.630869845692382,1.02904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,1.10732344824387,0.478364305972461,0.327726629431476,0,0.144649058581512,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,1.28528526568723,0,0,0.488660878060728,0.329940245945071,0,0,0,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.388076051348264,0,0,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0.32977250588296,0.322928853391811,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0.474503990371703,0,0.216010681643603,0,0,0,0,0.26175594198403,0,0,15.7834022831573,0.149516546043979,0,0,0,0.337912250981556,0.469428954583016,0.2604087696879,0.419437377702843,3.62376181239009,4.89651010638371,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,2.30162618253588,0.572895513439397,1.20297227640581,1.37016503954128,1.5107877947794,0.675022500231806,3.60256962579376,2.71885445390523,4.14208249401456,0.207574695168353,0,0.512200817262403,0.972426868273176,0.838452650511929,0.735374033800057,0.44449345560323,1.03017528619447,0.64183841918363,0.505394423527595,0.25347929989024,0,0.37456602987953,0.512201219238954,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0.476872379894642,0.145346416632329,0.470546902076653,0.338458431566706,0,1.05227884575137,0.271608227691724,0.561142271657738,0.593175090620871,0.197008964751127,0.409231043169689,0.309873682371932,0.578719832943424,1.99848462350357,0.233931608445408,0.644613162144895,0,0.220591419119515,0 | |||
|short_description=p3@Hivep1 | |||
}} |
Revision as of 23:52, 5 August 2015
Short description: | p3@Hivep1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hivep1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -247bp_to_ENSMUST00000060148, NM_007772, uc007qfk.1_5end |
EntrezGene: | 110521 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.56e-38 | 23 |
neuroblast (sensu Vertebrata) | 6.56e-38 | 23 |
neuron | 8.16e-25 | 33 |
neuronal stem cell | 8.16e-25 | 33 |
neuroblast | 8.16e-25 | 33 |
electrically signaling cell | 8.16e-25 | 33 |
electrically responsive cell | 3.46e-20 | 39 |
electrically active cell | 3.46e-20 | 39 |
neural cell | 7.98e-18 | 43 |
ectodermal cell | 2.66e-17 | 44 |
neurectodermal cell | 2.66e-17 | 44 |
neuron of cerebral cortex | 2.64e-12 | 6 |
embryonic cell | 5.36e-09 | 70 |
striatum neuron | 2.04e-08 | 3 |
granule cell | 1.42e-07 | 3 |
neuron of the ventral spinal cord | 1.57e-07 | 3 |
hippocampal neuron | 6.28e-07 | 3 |
raphe nuclei neuron | 7.98e-07 | 3 |