FFCP PHASE1:Mm9::chr1:72896151..72896183,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=336|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:72896151..72896183,+|id=chr1:72896151..72896183,+|ontology_enrichment_celltype=CL:0002453!3.88e-08!8|ontology_enrichment_celltype_v019_2=CL:0002453,1.58e-19,8;CL:0000333,2.66e-15,10;CL:0000095,2.66e-15,10;CL:0000243,2.66e-15,10;CL:0000123,2.66e-15,10;CL:0000125,2.66e-15,10;CL:0000030,2.66e-15,10;CL:0000339,2.66e-15,10;CL:0000128,3.02e-15,6;CL:0000126,3.02e-15,6;CL:0000127,3.02e-15,6;CL:0000182,2.07e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.30e-08!63;UBERON:0004111!2.51e-07!122;UBERON:0002107!2.70e-07!22;UBERON:0007499!2.70e-07!22;UBERON:0006925!2.70e-07!22;UBERON:0009497!2.70e-07!22;UBERON:0000015!2.70e-07!22;UBERON:0002423!2.70e-07!22;UBERON:0006235!2.70e-07!22;UBERON:0008835!2.70e-07!22;UBERON:0003894!2.70e-07!22;UBERON:0004161!2.70e-07!22;UBERON:0008836!2.70e-07!22;UBERON:0003056!3.03e-07!49;UBERON:0002346!7.07e-07!71;UBERON:0003075!7.07e-07!71;UBERON:0007284!7.07e-07!71;UBERON:0000025!9.66e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.65e-20,22;UBERON:0007499,1.65e-20,22;UBERON:0006925,1.65e-20,22;UBERON:0009497,1.65e-20,22;UBERON:0000015,1.65e-20,22;UBERON:0002423,1.65e-20,22;UBERON:0006235,1.65e-20,22;UBERON:0008835,1.65e-20,22;UBERON:0003894,1.65e-20,22;UBERON:0004161,1.65e-20,22;UBERON:0008836,1.65e-20,22;UBERON:0009854,1.86e-19,23;UBERON:0009856,1.86e-19,23;UBERON:0002365,1.32e-17,25;UBERON:0002330,1.32e-17,25;UBERON:0005256,7.10e-11,45;UBERON:0002368,2.33e-09,60;UBERON:0004111,2.40e-09,122;UBERON:0003914,6.63e-09,47;UBERON:0000025,1.39e-08,114;UBERON:0005172,2.16e-08,49;UBERON:0005173,2.16e-08,49;UBERON:0002417,2.16e-08,49;UBERON:0000916,2.16e-08,49;UBERON:0002530,2.67e-08,65;UBERON:0003104,5.08e-08,61;UBERON:0009142,5.08e-08,61;UBERON:0000949,4.49e-07,72|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9950009200049,20.7123898561424,30.5363794000916,72.716782253782,4.89952475688769,11.5002051491977,0,0,0,0,0.286533439938757,0,0.404632921719196,1.05798195854407,0,1.0165335962074,0.889294796111139,0,0,0,5.09320187881288,9.60545763303886,0.414758449233911,0.945041568321835,0.210324961351382,1.14260393761521,1.32521124570968,0.122490799214954,0.383381884072945,0,0,0.255374676170375,0.153606533256243,0,0.548925861614458,0.52091337055676,0.279182999001381,0.56276261003168,0.30559649555362,0.883885756421003,0.142371680799103,0,0,0,0,2.58127163094416,2.03991400112325,1.07940638327563,2.59910566979068,3.13618820968135,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,1.2220723662038,0,0,0,1.04096354370163,1.60931473103431,0.540186389416048,1.05493372485001,0.476255494059295,0.896796041993948,0.468508622798644,0.776110112217047,0.215567992932842,0,1.05570674498369,0.43839146485515,0.834141747676794,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0,0,0,0,1.1858105083486,0,0,0,0,0,0.25462585178142,1.43848068725405,11.1873306474774,10.9824565275233,23.0029130443767,14.5134969590716,8.42501717409313,1.01031551178845,1.79397413521912,5.30687873499704,0.369506380333209,0.37898282354097,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.723245292907558,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,2.06973894052407,0.643011105094777,0.177340233642274,1.60531935841864,1.15184314421485,1.522324745573,0.23467170806371,0.42366414172764,0,0,0,0.120625849856312,0,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,1.10717597753397,0,0.108005340821801,0.418176592028937,0.655087691238533,0.674321731924103,0.826534557253359,0,0,0,0.56369293868419,0,0.330916980914195,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0,1.73870634628971,1.12609485270709,0,0.214368379079066,0,0,0.460325236507177,1.14579102687879,0.515559547031063,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.588795680537589,0.342869252385415,0,0.715308569841963,0.145346416632329,0.470546902076653,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0|short_description=p@chr1:72896151..72896183,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=336 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:72896151..72896183,+ | |||
|description=CAGE_peak_at_chr1:72896151..72896183,+ | |||
|id=chr1:72896151..72896183,+ | |||
|ontology_enrichment_celltype=CL:0002453!3.88e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.58e-19,8;CL:0000333,2.66e-15,10;CL:0000095,2.66e-15,10;CL:0000243,2.66e-15,10;CL:0000123,2.66e-15,10;CL:0000125,2.66e-15,10;CL:0000030,2.66e-15,10;CL:0000339,2.66e-15,10;CL:0000128,3.02e-15,6;CL:0000126,3.02e-15,6;CL:0000127,3.02e-15,6;CL:0000182,2.07e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.30e-08!63;UBERON:0004111!2.51e-07!122;UBERON:0002107!2.70e-07!22;UBERON:0007499!2.70e-07!22;UBERON:0006925!2.70e-07!22;UBERON:0009497!2.70e-07!22;UBERON:0000015!2.70e-07!22;UBERON:0002423!2.70e-07!22;UBERON:0006235!2.70e-07!22;UBERON:0008835!2.70e-07!22;UBERON:0003894!2.70e-07!22;UBERON:0004161!2.70e-07!22;UBERON:0008836!2.70e-07!22;UBERON:0003056!3.03e-07!49;UBERON:0002346!7.07e-07!71;UBERON:0003075!7.07e-07!71;UBERON:0007284!7.07e-07!71;UBERON:0000025!9.66e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.65e-20,22;UBERON:0007499,1.65e-20,22;UBERON:0006925,1.65e-20,22;UBERON:0009497,1.65e-20,22;UBERON:0000015,1.65e-20,22;UBERON:0002423,1.65e-20,22;UBERON:0006235,1.65e-20,22;UBERON:0008835,1.65e-20,22;UBERON:0003894,1.65e-20,22;UBERON:0004161,1.65e-20,22;UBERON:0008836,1.65e-20,22;UBERON:0009854,1.86e-19,23;UBERON:0009856,1.86e-19,23;UBERON:0002365,1.32e-17,25;UBERON:0002330,1.32e-17,25;UBERON:0005256,7.10e-11,45;UBERON:0002368,2.33e-09,60;UBERON:0004111,2.40e-09,122;UBERON:0003914,6.63e-09,47;UBERON:0000025,1.39e-08,114;UBERON:0005172,2.16e-08,49;UBERON:0005173,2.16e-08,49;UBERON:0002417,2.16e-08,49;UBERON:0000916,2.16e-08,49;UBERON:0002530,2.67e-08,65;UBERON:0003104,5.08e-08,61;UBERON:0009142,5.08e-08,61;UBERON:0000949,4.49e-07,72 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9950009200049,20.7123898561424,30.5363794000916,72.716782253782,4.89952475688769,11.5002051491977,0,0,0,0,0.286533439938757,0,0.404632921719196,1.05798195854407,0,1.0165335962074,0.889294796111139,0,0,0,5.09320187881288,9.60545763303886,0.414758449233911,0.945041568321835,0.210324961351382,1.14260393761521,1.32521124570968,0.122490799214954,0.383381884072945,0,0,0.255374676170375,0.153606533256243,0,0.548925861614458,0.52091337055676,0.279182999001381,0.56276261003168,0.30559649555362,0.883885756421003,0.142371680799103,0,0,0,0,2.58127163094416,2.03991400112325,1.07940638327563,2.59910566979068,3.13618820968135,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,1.2220723662038,0,0,0,1.04096354370163,1.60931473103431,0.540186389416048,1.05493372485001,0.476255494059295,0.896796041993948,0.468508622798644,0.776110112217047,0.215567992932842,0,1.05570674498369,0.43839146485515,0.834141747676794,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0,0,0,0,1.1858105083486,0,0,0,0,0,0.25462585178142,1.43848068725405,11.1873306474774,10.9824565275233,23.0029130443767,14.5134969590716,8.42501717409313,1.01031551178845,1.79397413521912,5.30687873499704,0.369506380333209,0.37898282354097,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.723245292907558,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,2.06973894052407,0.643011105094777,0.177340233642274,1.60531935841864,1.15184314421485,1.522324745573,0.23467170806371,0.42366414172764,0,0,0,0.120625849856312,0,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,1.10717597753397,0,0.108005340821801,0.418176592028937,0.655087691238533,0.674321731924103,0.826534557253359,0,0,0,0.56369293868419,0,0.330916980914195,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0,1.73870634628971,1.12609485270709,0,0.214368379079066,0,0,0.460325236507177,1.14579102687879,0.515559547031063,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.588795680537589,0.342869252385415,0,0.715308569841963,0.145346416632329,0.470546902076653,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p@chr1:72896151..72896183,+ | |||
}} |
Latest revision as of 23:18, 5 August 2015
Short description: | p@chr1:72896151..72896183, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72896151..72896183, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.58e-19 | 8 |
migratory neural crest cell | 2.66e-15 | 10 |
neuron associated cell | 2.66e-15 | 10 |
glial cell (sensu Vertebrata) | 2.66e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 2.66e-15 | 10 |
glial cell | 2.66e-15 | 10 |
glioblast | 2.66e-15 | 10 |
glioblast (sensu Vertebrata) | 2.66e-15 | 10 |
oligodendrocyte | 3.02e-15 | 6 |
macroglial cell | 3.02e-15 | 6 |
astrocyte | 3.02e-15 | 6 |
hepatocyte | 2.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.65e-20 | 22 |
epithelial sac | 1.65e-20 | 22 |
digestive gland | 1.65e-20 | 22 |
epithelium of foregut-midgut junction | 1.65e-20 | 22 |
anatomical boundary | 1.65e-20 | 22 |
hepatobiliary system | 1.65e-20 | 22 |
foregut-midgut junction | 1.65e-20 | 22 |
hepatic diverticulum | 1.65e-20 | 22 |
liver primordium | 1.65e-20 | 22 |
septum transversum | 1.65e-20 | 22 |
liver bud | 1.65e-20 | 22 |
digestive tract diverticulum | 1.86e-19 | 23 |
sac | 1.86e-19 | 23 |
exocrine gland | 1.32e-17 | 25 |
exocrine system | 1.32e-17 | 25 |
trunk mesenchyme | 7.10e-11 | 45 |
endocrine gland | 2.33e-09 | 60 |
anatomical conduit | 2.40e-09 | 122 |
epithelial tube | 6.63e-09 | 47 |
tube | 1.39e-08 | 114 |
abdomen element | 2.16e-08 | 49 |
abdominal segment element | 2.16e-08 | 49 |
abdominal segment of trunk | 2.16e-08 | 49 |
abdomen | 2.16e-08 | 49 |
gland | 2.67e-08 | 65 |
mesenchyme | 5.08e-08 | 61 |
entire embryonic mesenchyme | 5.08e-08 | 61 |
endocrine system | 4.49e-07 | 72 |