FFCP PHASE1:Mm9::chr3:118134337..118134383,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=958|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:118134337..118134383,+|id=chr3:118134337..118134383,+|ontology_enrichment_celltype=CL:0000540!1.31e-20!33;CL:0000047!1.31e-20!33;CL:0000031!1.31e-20!33;CL:0000404!1.31e-20!33;CL:0000117!1.96e-16!23;CL:0000337!1.96e-16!23;CL:0000393!2.14e-15!39;CL:0000211!2.14e-15!39;CL:0002319!1.97e-14!43;CL:0000221!8.31e-14!44;CL:0000133!8.31e-14!44;CL:0000055!1.21e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.95e-19,33;CL:0000047,2.95e-19,33;CL:0000031,2.95e-19,33;CL:0000404,2.95e-19,33;CL:0000117,4.84e-18,23;CL:0000337,4.84e-18,23;CL:0000393,5.10e-15,39;CL:0000211,5.10e-15,39;CL:0002319,7.09e-13,43;CL:0000221,2.10e-12,44;CL:0000133,2.10e-12,44;CL:0002609,1.42e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.47e-28!73;UBERON:0005743!4.47e-28!73;UBERON:0000073!1.62e-27!75;UBERON:0001016!1.62e-27!75;UBERON:0002020!1.07e-23!34;UBERON:0001049!2.36e-21!52;UBERON:0005068!2.36e-21!52;UBERON:0006241!2.36e-21!52;UBERON:0007135!2.36e-21!52;UBERON:0002791!5.35e-21!29;UBERON:0003528!5.35e-21!29;UBERON:0001893!5.35e-21!29;UBERON:0000955!1.64e-20!50;UBERON:0006238!1.64e-20!50;UBERON:0002616!7.50e-20!49;UBERON:0003080!8.87e-20!40;UBERON:0002780!3.93e-19!39;UBERON:0001890!3.93e-19!39;UBERON:0006240!3.93e-19!39;UBERON:0004121!7.82e-17!102;UBERON:0000924!7.82e-17!102;UBERON:0006601!7.82e-17!102;UBERON:0002346!2.51e-16!71;UBERON:0003075!2.51e-16!71;UBERON:0007284!2.51e-16!71;UBERON:0000956!6.32e-15!21;UBERON:0001869!6.32e-15!21;UBERON:0000203!6.32e-15!21;UBERON:0000033!1.57e-13!63;UBERON:0003056!1.60e-13!49;UBERON:0002619!6.87e-12!17;UBERON:0002021!9.15e-10!10;UBERON:0000411!9.15e-10!10;UBERON:0001950!9.15e-10!10;UBERON:0002420!3.06e-07!8;UBERON:0007245!3.06e-07!8;UBERON:0010009!3.06e-07!8;UBERON:0010011!3.06e-07!8;UBERON:0000454!3.06e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.12e-30,34;UBERON:0003528,4.94e-30,29;UBERON:0002791,4.94e-30,29;UBERON:0001893,4.94e-30,29;UBERON:0001017,9.76e-26,73;UBERON:0001016,1.16e-24,75;UBERON:0003080,1.94e-24,40;UBERON:0002780,1.55e-23,39;UBERON:0001890,1.55e-23,39;UBERON:0006240,1.55e-23,39;UBERON:0000073,2.94e-22,54;UBERON:0000956,2.63e-21,21;UBERON:0001869,2.63e-21,21;UBERON:0000203,2.63e-21,21;UBERON:0000955,9.38e-21,47;UBERON:0006238,9.38e-21,47;UBERON:0001049,1.29e-20,52;UBERON:0005068,1.29e-20,52;UBERON:0006241,1.29e-20,52;UBERON:0007135,1.29e-20,52;UBERON:0002616,6.85e-20,46;UBERON:0003056,4.78e-18,49;UBERON:0002619,6.07e-17,17;UBERON:0004121,1.75e-16,95;UBERON:0000924,1.75e-16,95;UBERON:0006601,1.75e-16,95;UBERON:0002346,9.89e-16,64;UBERON:0003075,9.89e-16,64;UBERON:0007284,9.89e-16,64;UBERON:0002021,2.74e-13,10;UBERON:0000411,2.74e-13,10;UBERON:0001950,2.74e-13,10;UBERON:0010371,1.84e-12,73;UBERON:0002420,1.09e-09,8;UBERON:0007245,1.09e-09,8;UBERON:0010009,1.09e-09,8;UBERON:0010011,1.09e-09,8;UBERON:0000454,1.09e-09,8;UBERON:0010314,8.28e-08,92;UBERON:0000369,1.84e-07,5;UBERON:0002435,1.84e-07,5;UBERON:0000204,1.84e-07,5;UBERON:0010082,1.84e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,5.86717736492834,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,2.69592992002042,3.64516033495565,3.15487442027073,0.856952953211411,3.09215957332259,17.1487118900936,20.4150853268843,22.0612508786405,3.30347642998166,1.40456071893706,0.614426133024974,5.40733779693795,5.39777097254217,7.29278718779464,1.11673199600552,2.8138130501584,2.29197371665215,1.47314292736834,0.996601765593721,3.54158947068071,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.693941307064543,0.608930956624282,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,5.49000723382352,8.79580464790051,6.25767552692195,4.60287823194595,2.70124457927428,5.19172041816825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41159794256509,6.99751364179134,0,0,0.639864751605702,0.696710015581316,0.902072229254653,0.80673409849337,1.11189021922435,0.570676878337677,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0,0,0.456994050438915,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,1.57754109708128,0.390438744296638,0.430846795465598,1.43381278771531,1.78238939265915,0.849229592366497,2.02405350837447,1.75353514746787,5.92931666919785,2.24924921495265,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.720244376125241,0.517434735131018,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,1.21991680276109,0.324016022465404,0.418176592028937,0.655087691238533,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,15.2482997506608,11.5081309126794,8.02053718815155,9.10821866421544,2.74033007908257,3.7769694869485,5.40018000185445,8.10578165803597,5.89085131679466,3.10656187051092,0,1.59609949360412,1.36586884603307,1.21553358534147,0,0.183843508450014,1.55572709461131,1.44224540067226,2.56735367673452,1.26348605881899,2.5347929989024,1.69763707247469,1.96647165686753,1.79270426733634,2.06767688240208,2.38146845641537,1.62238056322798,1.35036454324594,0.824171801606613,1.47198920134397,1.71434626192708,1.24233064311536,1.43061713968393,2.32554266611726,1.97629698872194,2.19997980518359,1.09756783723664,1.8414879800649,1.62964936615034,1.12228454331548,1.30498519936592,0.985044823755635,1.63692417267876,1.85924209423159,1.73615949883027,4.49659040288303,1.16965804222704,1.07435527024149,0.191288332068843,0,0|short_description=p@chr3:118134337..118134383,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=958 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:118134337..118134383,+ | |||
|description=CAGE_peak_at_chr3:118134337..118134383,+ | |||
|id=chr3:118134337..118134383,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.31e-20!33;CL:0000047!1.31e-20!33;CL:0000031!1.31e-20!33;CL:0000404!1.31e-20!33;CL:0000117!1.96e-16!23;CL:0000337!1.96e-16!23;CL:0000393!2.14e-15!39;CL:0000211!2.14e-15!39;CL:0002319!1.97e-14!43;CL:0000221!8.31e-14!44;CL:0000133!8.31e-14!44;CL:0000055!1.21e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.95e-19,33;CL:0000047,2.95e-19,33;CL:0000031,2.95e-19,33;CL:0000404,2.95e-19,33;CL:0000117,4.84e-18,23;CL:0000337,4.84e-18,23;CL:0000393,5.10e-15,39;CL:0000211,5.10e-15,39;CL:0002319,7.09e-13,43;CL:0000221,2.10e-12,44;CL:0000133,2.10e-12,44;CL:0002609,1.42e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.47e-28!73;UBERON:0005743!4.47e-28!73;UBERON:0000073!1.62e-27!75;UBERON:0001016!1.62e-27!75;UBERON:0002020!1.07e-23!34;UBERON:0001049!2.36e-21!52;UBERON:0005068!2.36e-21!52;UBERON:0006241!2.36e-21!52;UBERON:0007135!2.36e-21!52;UBERON:0002791!5.35e-21!29;UBERON:0003528!5.35e-21!29;UBERON:0001893!5.35e-21!29;UBERON:0000955!1.64e-20!50;UBERON:0006238!1.64e-20!50;UBERON:0002616!7.50e-20!49;UBERON:0003080!8.87e-20!40;UBERON:0002780!3.93e-19!39;UBERON:0001890!3.93e-19!39;UBERON:0006240!3.93e-19!39;UBERON:0004121!7.82e-17!102;UBERON:0000924!7.82e-17!102;UBERON:0006601!7.82e-17!102;UBERON:0002346!2.51e-16!71;UBERON:0003075!2.51e-16!71;UBERON:0007284!2.51e-16!71;UBERON:0000956!6.32e-15!21;UBERON:0001869!6.32e-15!21;UBERON:0000203!6.32e-15!21;UBERON:0000033!1.57e-13!63;UBERON:0003056!1.60e-13!49;UBERON:0002619!6.87e-12!17;UBERON:0002021!9.15e-10!10;UBERON:0000411!9.15e-10!10;UBERON:0001950!9.15e-10!10;UBERON:0002420!3.06e-07!8;UBERON:0007245!3.06e-07!8;UBERON:0010009!3.06e-07!8;UBERON:0010011!3.06e-07!8;UBERON:0000454!3.06e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.12e-30,34;UBERON:0003528,4.94e-30,29;UBERON:0002791,4.94e-30,29;UBERON:0001893,4.94e-30,29;UBERON:0001017,9.76e-26,73;UBERON:0001016,1.16e-24,75;UBERON:0003080,1.94e-24,40;UBERON:0002780,1.55e-23,39;UBERON:0001890,1.55e-23,39;UBERON:0006240,1.55e-23,39;UBERON:0000073,2.94e-22,54;UBERON:0000956,2.63e-21,21;UBERON:0001869,2.63e-21,21;UBERON:0000203,2.63e-21,21;UBERON:0000955,9.38e-21,47;UBERON:0006238,9.38e-21,47;UBERON:0001049,1.29e-20,52;UBERON:0005068,1.29e-20,52;UBERON:0006241,1.29e-20,52;UBERON:0007135,1.29e-20,52;UBERON:0002616,6.85e-20,46;UBERON:0003056,4.78e-18,49;UBERON:0002619,6.07e-17,17;UBERON:0004121,1.75e-16,95;UBERON:0000924,1.75e-16,95;UBERON:0006601,1.75e-16,95;UBERON:0002346,9.89e-16,64;UBERON:0003075,9.89e-16,64;UBERON:0007284,9.89e-16,64;UBERON:0002021,2.74e-13,10;UBERON:0000411,2.74e-13,10;UBERON:0001950,2.74e-13,10;UBERON:0010371,1.84e-12,73;UBERON:0002420,1.09e-09,8;UBERON:0007245,1.09e-09,8;UBERON:0010009,1.09e-09,8;UBERON:0010011,1.09e-09,8;UBERON:0000454,1.09e-09,8;UBERON:0010314,8.28e-08,92;UBERON:0000369,1.84e-07,5;UBERON:0002435,1.84e-07,5;UBERON:0000204,1.84e-07,5;UBERON:0010082,1.84e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,5.86717736492834,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,2.69592992002042,3.64516033495565,3.15487442027073,0.856952953211411,3.09215957332259,17.1487118900936,20.4150853268843,22.0612508786405,3.30347642998166,1.40456071893706,0.614426133024974,5.40733779693795,5.39777097254217,7.29278718779464,1.11673199600552,2.8138130501584,2.29197371665215,1.47314292736834,0.996601765593721,3.54158947068071,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.693941307064543,0.608930956624282,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,5.49000723382352,8.79580464790051,6.25767552692195,4.60287823194595,2.70124457927428,5.19172041816825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41159794256509,6.99751364179134,0,0,0.639864751605702,0.696710015581316,0.902072229254653,0.80673409849337,1.11189021922435,0.570676878337677,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0,0,0.456994050438915,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,1.57754109708128,0.390438744296638,0.430846795465598,1.43381278771531,1.78238939265915,0.849229592366497,2.02405350837447,1.75353514746787,5.92931666919785,2.24924921495265,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.720244376125241,0.517434735131018,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,1.21991680276109,0.324016022465404,0.418176592028937,0.655087691238533,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,15.2482997506608,11.5081309126794,8.02053718815155,9.10821866421544,2.74033007908257,3.7769694869485,5.40018000185445,8.10578165803597,5.89085131679466,3.10656187051092,0,1.59609949360412,1.36586884603307,1.21553358534147,0,0.183843508450014,1.55572709461131,1.44224540067226,2.56735367673452,1.26348605881899,2.5347929989024,1.69763707247469,1.96647165686753,1.79270426733634,2.06767688240208,2.38146845641537,1.62238056322798,1.35036454324594,0.824171801606613,1.47198920134397,1.71434626192708,1.24233064311536,1.43061713968393,2.32554266611726,1.97629698872194,2.19997980518359,1.09756783723664,1.8414879800649,1.62964936615034,1.12228454331548,1.30498519936592,0.985044823755635,1.63692417267876,1.85924209423159,1.73615949883027,4.49659040288303,1.16965804222704,1.07435527024149,0.191288332068843,0,0 | |||
|short_description=p@chr3:118134337..118134383,+ | |||
}} |
Latest revision as of 22:38, 5 August 2015
Short description: | p@chr3:118134337..118134383, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:118134337..118134383, + |
Coexpression cluster: | MCL_coexpression_mm9:958 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.95e-19 | 33 |
neuronal stem cell | 2.95e-19 | 33 |
neuroblast | 2.95e-19 | 33 |
electrically signaling cell | 2.95e-19 | 33 |
CNS neuron (sensu Vertebrata) | 4.84e-18 | 23 |
neuroblast (sensu Vertebrata) | 4.84e-18 | 23 |
electrically responsive cell | 5.10e-15 | 39 |
electrically active cell | 5.10e-15 | 39 |
neural cell | 7.09e-13 | 43 |
ectodermal cell | 2.10e-12 | 44 |
neurectodermal cell | 2.10e-12 | 44 |
neuron of cerebral cortex | 1.42e-08 | 6 |